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Clc05G25140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G25140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeavy metal-associated domain containing protein
Genome locationClcChr05:32943666..32945798
RNA-Seq ExpressionClc05G25140
SyntenyClc05G25140
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013033.1 hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3286.32Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR
        A AGIGVRK KIFPHASSLAS+ESLSLPLVQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQ+P SRVSTIKRL G S R
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR

KGN52069.1 hypothetical protein Csa_009028 [Cucumis sativus]2.1e-3487.1Show/hide
Query:  VAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR
        V GIGVRK++IFPHASSLAS+ESL+LPLVQEIVLTADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTRR Q+PSRVSTI+RLF   CR
Subjt:  VAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR

XP_022968296.1 uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima]4.0e-3387.37Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR
        A AGIGVRK KIFPHASSLAS+ESLSLPLVQEIV TADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTR+LQ+P SRVST+KRL G S R
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR

XP_023542320.1 uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo]2.6e-3286.32Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR
        A AGIGVRK KIFPHASSLAS+ESLSLPLVQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQ+P SRVSTIKRL G S R
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR

XP_038892707.1 uncharacterized protein LOC120081691 [Benincasa hispida]2.3e-3690.43Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR
        A AGIGVRK+KIFPHASSLAS+ESLSLPLVQEIVLTADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQ+PSR+STIKRL G  CR
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR

TrEMBL top hitse value%identityAlignment
A0A0A0KT62 Uncharacterized protein1.0e-3487.1Show/hide
Query:  VAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR
        V GIGVRK++IFPHASSLAS+ESL+LPLVQEIVLTADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTRR Q+PSRVSTI+RLF   CR
Subjt:  VAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR

A0A6J1DB71 uncharacterized protein LOC1110187073.4e-3079.8Show/hide
Query:  AGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-------SRVSTIKRLFGYSCR
        A IGVRK +IFPHASSLAS+ESLSLPLVQEIVLTADIRC ECQ KLANILSK+NDTESVVVNLL+KKVILTRRLQVP       S+V+TIKRL G S R
Subjt:  AGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-------SRVSTIKRLFGYSCR

A0A6J1G176 uncharacterized protein LOC111449743 isoform X14.6e-2766.67Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPL---------------------------VQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT
        A AGIGVRK KIFPHASSLAS+ESLSLPL                           VQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILT
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPL---------------------------VQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT

Query:  RRLQV-PSRVSTIKRLFGYS
        R+LQ+  SRVSTIKRL G S
Subjt:  RRLQV-PSRVSTIKRLFGYS

A0A6J1G188 uncharacterized protein LOC111449743 isoform X31.8e-3186.02Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQV-PSRVSTIKRLFGYS
        A AGIGVRK KIFPHASSLAS+ESLSLPLVQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQ+  SRVSTIKRL G S
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQV-PSRVSTIKRLFGYS

A0A6J1HUG9 uncharacterized protein LOC111467567 isoform X31.9e-3387.37Show/hide
Query:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR
        A AGIGVRK KIFPHASSLAS+ESLSLPLVQEIV TADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTR+LQ+P SRVST+KRL G S R
Subjt:  AVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVP-SRVSTIKRLFGYSCR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68585.1 unknown protein7.6e-1450Show/hide
Query:  SSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT------RRLQ------VPSRVSTIKRL
        +SLAS+ SLS+PL+QEIVL+ADIRC++CQ+K+A+I+++M +T S++V++L+KKV LT      RR+       +  ++STIKRL
Subjt:  SSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT------RRLQ------VPSRVSTIKRL

AT2G35730.1 Heavy metal transport/detoxification superfamily protein1.1e-0440.3Show/hide
Query:  SLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVST
        +L   E LSLP  Q I + AD+ C  CQ +++ I+SKM   E  VV+ L KK+++ R    P  VS+
Subjt:  SLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGCCGGAATCGGAGTTCGGAAGCAAAAAATTTTTCCTCATGCTTCTAGCCTTGCTTCCATGGAGTCCTTATCTCTGCCTCTTGTTCAGGAAATTGTATTAAC
AGCTGATATTCGATGTGCTGAATGTCAGAAGAAACTGGCAAATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGTTGGACAAGAAAGTGATATTGA
CTCGAAGATTACAGGTTCCATCCAGAGTTTCAACAATCAAGAGATTGTTTGGTTATTCTTGCAGATAA
mRNA sequenceShow/hide mRNA sequence
CATAAAAGTAAATAAAGTATTATATCTCAAAATAGTAAGGATTTTAGGGAGCAATAAATTAAAGGAATATGATACTGAATGATATTATAAATTAATTAGTGCTTGGTCAC
AGAAGCAACCTCGAAGGAATCATCCTGGCGAGGAAAAAAATAGCCAAAACTCTCTTTTGCGGAAAGCAGCTGTCATTTGTGAAACGAACCATCTTTGTCAACTCTTTCTC
ATCATCCATTTCACTCTCACGGCTTAATTACCCTCTTTTACTTATCCTCCATTATCTTCCTTCCCCCCCTTTCCCCTTCTCCCTTTTCCCAACCACTTATAATAATCCAT
CCCTCTTTCTTCACAAACCCATACATAAAATCTTCCTTTCCCTTCTTCACGATCCCCTGTTTCATTGGCGGAGCATGGCGGTGGCCGGAATCGGAGTTCGGAAGCAAAAA
ATTTTTCCTCATGCTTCTAGCCTTGCTTCCATGGAGTCCTTATCTCTGCCTCTTGTTCAGGAAATTGTATTAACAGCTGATATTCGATGTGCTGAATGTCAGAAGAAACT
GGCAAATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGTTGGACAAGAAAGTGATATTGACTCGAAGATTACAGGTTCCATCCAGAGTTTCAACAA
TCAAGAGATTGTTTGGTTATTCTTGCAGATAATTATAAAATATATAATGAAATATTTTTTTAGTCATGTTGTAGATAGATAAATGATCCCACTACTTGATCTTTAGCTTC
AAAGAAAAAAAAGTTCAAGAGATTTCCTTTCTTCTTCTTCTTCATTTTTTTTTCCATCTGATATAATATTAAATGTACCTTCACCCACTAGCTTAAGTTTTTAGGTCAAT
TAATAATTTACGAAAATATATTTGCATAGAACATTAAATATTGCCTTTTGGATGCAACAAAATCGTCGTACTACTTCAAAATATGTTATTTGTCAAAGTTGAGCACATCC
CGAAGGATTGTGTGTTTTCGGGCTGTGTGTTGGCTGAAAACTTGATTTTAGTGTAACACAATCAAATGTTTGATTGGCGACTTTTCTCTAAATGATCTTGTTTTTAATTG
TAATTTGTCTGTTTGTGTTAATTTCTTTGTTGTATGTCTTAAAGTTCTATGATACGAAATTCATATTTTATGTATGTAGGGTTTGTATTGTCAAGTTGTATCAACTTGGA
CCAACTTTTTATTTCGTGAACTTTTACTCTAAATGTAAACAGTTGCAACAATTTTAACATTCAACTTTAACAGTGTTGCAATTTTAATCATCTAATAAGTTTTTCTCTAA
ATATCGATTTTTTT
Protein sequenceShow/hide protein sequence
MAVAGIGVRKQKIFPHASSLASMESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQVPSRVSTIKRLFGYSCR