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Clc05G25250 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G25250
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:33023519..33024148
RNA-Seq ExpressionClc05G25250
SyntenyClc05G25250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446569.1 PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo]9.3e-4680.49Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQ+ EEED YYAEIRKQIILLLTAYDDD+  E  P+TAAK G + +QRDR PQ + NLSLCPNG DFEEPV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHRQKN
        YKKYCV RR+RKHERKEKHRQKN
Subjt:  YKKYCVFRRMRKHERKEKHRQKN

XP_011655764.1 uncharacterized protein LOC105435583 [Cucumis sativus]1.2e-5083.74Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQ+ EEED YYAEIRKQI LLLTAYDDDDE+E +PKTAAK G E RQRD  PQ +RN+SLCPNGNDF+EPV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHRQKN
        YKKYCVFRR+RKHERKEKHRQKN
Subjt:  YKKYCVFRRMRKHERKEKHRQKN

XP_022957510.1 uncharacterized protein LOC111458884 [Cucurbita moschata]1.6e-4277.5Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQVAEE+D YYAEIRKQIILLLT YDDD+++E  PKTAAK+G E   R R PQ +RNLS C NGND E PV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHR
        YK+Y +FRRMRKHERKEKHR
Subjt:  YKKYCVFRRMRKHERKEKHR

XP_023524582.1 uncharacterized protein LOC111788475 isoform X1 [Cucurbita pepo subsp. pepo]5.6e-4378.33Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQVAEE+D YYAEIRKQIILLLTA +DDD++E  PKTAAK+G E   R R PQP+RNLS C NGND E PV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHR
        YK+Y +FRRMRKHERKEKHR
Subjt:  YKKYCVFRRMRKHERKEKHR

XP_023524590.1 uncharacterized protein LOC111788475 isoform X2 [Cucurbita pepo subsp. pepo]5.6e-4378.33Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQVAEE+D YYAEIRKQIILLLTA +DDD++E  PKTAAK+G E   R R PQP+RNLS C NGND E PV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHR
        YK+Y +FRRMRKHERKEKHR
Subjt:  YKKYCVFRRMRKHERKEKHR

TrEMBL top hitse value%identityAlignment
A0A0A0KT55 Uncharacterized protein6.0e-5183.74Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQ+ EEED YYAEIRKQI LLLTAYDDDDE+E +PKTAAK G E RQRD  PQ +RN+SLCPNGNDF+EPV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHRQKN
        YKKYCVFRR+RKHERKEKHRQKN
Subjt:  YKKYCVFRRMRKHERKEKHRQKN

A0A1S3BG13 uncharacterized protein LOC1034892644.5e-4680.49Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQ+ EEED YYAEIRKQIILLLTAYDDD+  E  P+TAAK G + +QRDR PQ + NLSLCPNG DFEEPV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHRQKN
        YKKYCV RR+RKHERKEKHRQKN
Subjt:  YKKYCVFRRMRKHERKEKHRQKN

A0A5A7SZ32 Uncharacterized protein3.4e-3879.25Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQ+ EEED YYAEIRKQIILLLTAYDDD+  E  P+TAAK G + +QRDR PQ + NLSLCPNG DFEEPV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCV
        YKKYCV
Subjt:  YKKYCV

A0A6J1H0R7 uncharacterized protein LOC1114588847.9e-4377.5Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQVAEE+D YYAEIRKQIILLLT YDDD+++E  PKTAAK+G E   R R PQ +RNLS C NGND E PV HVNSWENGNGTGVFIP+AVK
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHR
        YK+Y +FRRMRKHERKEKHR
Subjt:  YKKYCVFRRMRKHERKEKHR

A0A6J1JBG9 uncharacterized protein LOC1114852393.0e-4276.67Show/hide
Query:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK
        MDFK ELNTQVAEE+DSYYAEIRKQIILLLT YDDD+++E  PKTAAK+G E   R   PQ +RNLS C NGND EEPV HVNSWENGNGTGVFIP+AV+
Subjt:  MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVFRRMRKHERKEKHR
        +K+Y +FRRMRKHERKEKHR
Subjt:  YKKYCVFRRMRKHERKEKHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCAAAGACGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGAAAGCAGATCATTCTACTTTTGACAGCATACGATGATGACGA
CGAGATCGAACATATTCCCAAAACTGCAGCCAAACAAGGCACAGAAGGTCGACAAAGAGACCGCCGCCCACAGCCACAGAGAAATTTGAGTTTGTGTCCAAATGGGAATG
ATTTTGAAGAACCTGTTGGACATGTAAATTCATGGGAGAATGGGAATGGAACAGGGGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTTTTCAGAAGGATG
AGAAAGCATGAGAGAAAAGAAAAACACAGACAGAAGAACAAAACCTAG
mRNA sequenceShow/hide mRNA sequence
TTCCCCATAACCATGGATTTCAAAGACGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGAAAGCAGATCATTCTACTTTTGACAGCATA
CGATGATGACGACGAGATCGAACATATTCCCAAAACTGCAGCCAAACAAGGCACAGAAGGTCGACAAAGAGACCGCCGCCCACAGCCACAGAGAAATTTGAGTTTGTGTC
CAAATGGGAATGATTTTGAAGAACCTGTTGGACATGTAAATTCATGGGAGAATGGGAATGGAACAGGGGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTT
TTCAGAAGGATGAGAAAGCATGAGAGAAAAGAAAAACACAGACAGAAGAACAAAACCTAGGATTATCCATGTTTTCAAAAGGGTAAATTGCAAAATAATACCCTTCGACT
TTGTTCCAAAAATATTCCTATTCTTTCAAAGGTTGTAATAATACATTTTGACCTTTTATAGTAGGAATCCTTTAGAATTTTAGATAAAAAATCTGAAATGACTGTAGTGG
TG
Protein sequenceShow/hide protein sequence
MDFKDELNTQVAEEEDSYYAEIRKQIILLLTAYDDDDEIEHIPKTAAKQGTEGRQRDRRPQPQRNLSLCPNGNDFEEPVGHVNSWENGNGTGVFIPRAVKYKKYCVFRRM
RKHERKEKHRQKNKT