; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G25475 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G25475
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPiriformospora indica-insensitive protein 2-like
Genome locationClcChr05:33218294..33218599
RNA-Seq ExpressionClc05G25475
SyntenyClc05G25475
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]1.2e-2476.24Show/hide
Query:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        SSSSSSSSSSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY GQTF FLP+GVPIPPSGPSDRHNSVVDS+PP
Subjt:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        N
Subjt:  N

KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2370.59Show/hide
Query:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLL-SGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
        + SSSSSSSSSSSS         AIF+ LLLL SGF SATRPGK M H      D+SN  FNYKTGFRYVGQTFS+LPRGVPIPPSGPSDRHNS+VDS+P
Subjt:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLL-SGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP

Query:  PN
        P+
Subjt:  PN

KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2166.34Show/hide
Query:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        M SSSSSSSSS S+ F          + LLL+SGF SATRPGK M H      D+ N  FNYKTGFRYVGQTFS+LPRGVPIPPSGPSDRHNS+VDS+PP
Subjt:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        +
Subjt:  N

KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]8.3e-2165.35Show/hide
Query:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        MPSSSS +S          +    + + LLLLSG SSATRPGK ME   M N DMSNS   YKT FRY GQTFSFLP+GVPIPPSGPSDRHNSVVDS+PP
Subjt:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        N
Subjt:  N

TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]1.2e-2476.24Show/hide
Query:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        SSSSSSSSSSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY GQTF FLP+GVPIPPSGPSDRHNSVVDS+PP
Subjt:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein4.0e-2165.35Show/hide
Query:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        MPSSSS +S          +    + + LLLLSG SSATRPGK ME   M N DMSNS   YKT FRY GQTFSFLP+GVPIPPSGPSDRHNSVVDS+PP
Subjt:  MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        N
Subjt:  N

A0A5A7SV51 Putative Membrane lipoprotein6.0e-2576.24Show/hide
Query:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        SSSSSSSSSSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY GQTF FLP+GVPIPPSGPSDRHNSVVDS+PP
Subjt:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        N
Subjt:  N

A0A5D2EBI1 Uncharacterized protein2.2e-1153.16Show/hide
Query:  NPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYF--NYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
        N I +   + LL+G S ATRPGK +    + +  +S + F   Y+TGFRY GQ F+F P+G+PIPPSGPS RHNSVVDS
Subjt:  NPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYF--NYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS

A0A5D3CCP4 Putative Membrane lipoprotein6.0e-2576.24Show/hide
Query:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP
        SSSSSSSSSSSS FQ K N I IFI  LLLLSGFSSATRPG  ME       DMSNS  NYK T FRY GQTF FLP+GVPIPPSGPSDRHNSVVDS+PP
Subjt:  SSSSSSSSSSSSFFQCKLNPIAIFI-FLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYK-TGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPP

Query:  N
        N
Subjt:  N

F6HF28 Uncharacterized protein2.0e-1247.06Show/hide
Query:  SSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMM---EHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
        SS SSSSSS S        PI +     L+ G  +ATRPG+MM   +      + M+     +KT F+  GQ F+F P+GVPIPPSGPS RHNS VDS P
Subjt:  SSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMM---EHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP

Query:  PN
         N
Subjt:  PN

SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA4.3e-0437.18Show/hide
Query:  IAIFIFLLLLSGFSSATRPGKMME-HHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
        +   +FL   S   +A R G  ME    +      NS+             F +LP+GVPIPPS PS RHNS V+S+P
Subjt:  IAIFIFLLLLSGFSSATRPGKMME-HHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein3.1e-0537.18Show/hide
Query:  IAIFIFLLLLSGFSSATRPGKMME-HHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
        +   +FL   S   +A R G  ME    +      NS+             F +LP+GVPIPPS PS RHNS V+S+P
Subjt:  IAIFIFLLLLSGFSSATRPGKMME-HHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCCAATGCAAACTCAATCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTTCTGGGTTTTCCTC
TGCAACTCGGCCGGGTAAAATGATGGAACATCATGGGATGAATAATTCCGACATGTCGAATTCTTATTTCAATTACAAGACTGGCTTCCGATATGTCGGTCAGACCTTCA
GCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGTCACAACTCTGTCGTTGACTCTGTTCCTCCCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCCAATGCAAACTCAATCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTTCTGGGTTTTCCTC
TGCAACTCGGCCGGGTAAAATGATGGAACATCATGGGATGAATAATTCCGACATGTCGAATTCTTATTTCAATTACAAGACTGGCTTCCGATATGTCGGTCAGACCTTCA
GCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGTCACAACTCTGTCGTTGACTCTGTTCCTCCCAATTAA
Protein sequenceShow/hide protein sequence
MPSSSSSSSSSSSSFFQCKLNPIAIFIFLLLLSGFSSATRPGKMMEHHGMNNSDMSNSYFNYKTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN