CuGenDBv2

Gene ID	Clc05G25525
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	DNL-type domain-containing protein
Genome location	ClcChr05:33284283..33286383
RNA-Seq Expression	Clc05G25525
Synteny	Clc05G25525
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0050821 - protein stabilization (biological process) GO:0005739 - mitochondrion (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0051087 - chaperone binding (molecular function)
InterPro domains	IPR007853 - Zinc finger, DNL-type IPR024158 - Mitochondrial import protein TIM15

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7032119.1 DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]

6.9e-68

81.29

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKT+ FSSPALL QS N  +TRP PSIN+F+PIV  SKANPSNG FIRSR F TAPV RE R KVL VSRLVDG  GDDDESAQRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSL++TFTCN C +RTKRLINRLAYERGLVFVQCAGC KYHKLVDNLGLIVEYDFRE+D+DV+SNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_004135125.1 uncharacterized protein C24H6.02c isoform X3 [Cucumis sativus]

2.3e-71

84.21

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Query:  MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAA TV FSSP LL H  N  +TRP PSI SFKPIV  SKANPSNGVFIRSRNF TAPV RERRYKVL VS LVDGY GDDDE +QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED+D+DS+SDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_008446529.1 PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo]

4.6e-72

84.8

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPSNGVFIRSRNF TAPV R RRYKVL VS LVDGY GDDDES+QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_016900245.1 PREDICTED: mitochondrial protein import protein ZIM17 isoform X2 [Cucumis melo]

1.6e-69

83.63

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPSNGVFI  RNF TAPV R RRYKVL VS LVDGY GDDDES+QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

XP_038891803.1 uncharacterized protein C24H6.02c [Benincasa hispida]

2.1e-77

89.47

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKTV+FSSPALLH S NS ETRPL SINSFK I+ FSKANPSNGVFIRSRNF T PV RERRYKVL VSRLVDGYPGDDDESAQRNSD  AA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMD+DSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR03 DNL-type domain-containing protein

1.1e-71

84.21

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Query:  MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAA TV FSSP LL H  N  +TRP PSI SFKPIV  SKANPSNGVFIRSRNF TAPV RERRYKVL VS LVDGY GDDDE +QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED+D+DS+SDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A1S3BG31 uncharacterized protein C24H6.02c isoform X1

2.2e-72

84.8

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPSNGVFIRSRNF TAPV R RRYKVL VS LVDGY GDDDES+QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A1S4DWZ3 mitochondrial protein import protein ZIM17 isoform X2

7.9e-70

83.63

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPSNGVFI  RNF TAPV R RRYKVL VS LVDGY GDDDES+QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A5A7SVJ1 Mitochondrial protein import protein ZIM17 isoform X2

2.2e-72

84.8

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Query:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        MAAAKTV FSSP LLH   N  +T P PSINSFKPI+  SKANPSNGVFIRSRNF TAPV R RRYKVL VS LVDGY GDDDES+QRNSD GAA+DIKL
Subjt:  MAAAKTVFFSSPALLHQS-NSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSLM+TFTCN CSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREED D+DSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

A0A6J1D799 uncharacterized protein LOC111017577

7.4e-68

78.36

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Query:  MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL
        M AAKT+F SSPALL H  NS +  P PSI +F+PI+  SKANPSN VFIRSRNF+TAPV+RERRYKV AVSRLVDG  G+D++SA+RNSDMGAA+DIK 
Subjt:  MAAAKTVFFSSPALL-HQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKL

Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV
        PRRSL++ FTCN C+ RTKR+INRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF+EEDMDVDSNSDQV
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

SwissProt top hits

e value

%identity

Alignment

A1L1P7 DNL-type zinc finger protein

2.7e-06

44.19

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Query:  ITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL
        + +TC +CS R+ + I++LAY +G+V V C GC+ +H + DNL
Subjt:  ITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL

Q0IH40 DNL-type zinc finger protein

5.4e-07

34.48

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Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR
        P     + +TC +C+ R+ + I+++AY +G+V V+C GC+ +H + DNLG   + + R
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFR

Q5SXM8 DNL-type zinc finger protein

7.0e-07

45.45

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Query:  ITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG
        + +TC +C  R+ + I++LAY +G+V V C GCQ +H + DNLG
Subjt:  ITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG

Q9D113 DNL-type zinc finger protein

3.5e-06

44.19

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Query:  ITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL
        + +TC +C  R+ + I++LAY +G+V V C GCQ +H + DNL
Subjt:  ITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNL

Arabidopsis top hits

e value

%identity

Alignment

AT1G68730.1 Zim17-type zinc finger protein

1.2e-30

46.5

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Query:  SSPALLHQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKLPRRSLMITFT
        + P   H S SF   P P      PI    ++  +  + +        P  R R + V     L D    + DE +  ++++ A++DIKLPRRSL + FT
Subjt:  SSPALLHQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKLPRRSLMITFT

Query:  CNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSN
        CN C ERTKRLINR AYE+GLVFVQCAGC K+HKLVDNLGLIVEYDFRE   D+ ++
Subjt:  CNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSN

AT3G54826.1 Zim17-type zinc finger protein

1.5e-07

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Query:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG
        PR   M+ FTC +C  R+ ++ +R +YE G+V V+C GC   H + D  G
Subjt:  PRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLG

AT5G27280.1 Zim17-type zinc finger protein

1.0e-13

55.93

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Query:  KLPRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF
        K PRR + + FTCN+C +RT R IN  AY  G VFVQC GC  +HKLVDNL L  E  +
Subjt:  KLPRRSLMITFTCNLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDF

Sequences

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CDS sequence

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ATGGCCGCGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCAACTCTTTCGAGACTCGGCCGCTTCCATCCATCAACTCATTCAAACCTATAGTCTT
CTTTTCGAAAGCAAACCCTAGCAATGGTGTCTTCATTAGAAGTAGAAACTTCTATACAGCACCAGTTCTTCGAGAACGCAGATATAAGGTGCTTGCGGTTTCTAGATTGG
TGGATGGTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATATGGGGGCAGCCGTTGACATAAAGCTTCCAAGAAGAAGTTTGATGATAACGTTTACTTGT
AACCTATGTAGTGAGAGGACGAAGAGGCTCATCAATCGATTAGCTTACGAACGGGGGCTTGTTTTTGTTCAGTGTGCAGGGTGTCAAAAGTACCACAAATTGGTTGATAA
TCTTGGCCTTATAGTTGAGTATGACTTCCGGGAGGAGGACATGGATGTGGACTCAAATTCAGATCAAGTTTGA

mRNA sequence

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Protein sequence

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MAAAKTVFFSSPALLHQSNSFETRPLPSINSFKPIVFFSKANPSNGVFIRSRNFYTAPVLRERRYKVLAVSRLVDGYPGDDDESAQRNSDMGAAVDIKLPRRSLMITFTC
NLCSERTKRLINRLAYERGLVFVQCAGCQKYHKLVDNLGLIVEYDFREEDMDVDSNSDQV

Clc05G25525 (gene) of Watermelon (cordophanus) v2 genome