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Clc05G26040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G26040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionH4/H2A histone acetyltransferase complex
Genome locationClcChr05:33703275..33704910
RNA-Seq ExpressionClc05G26040
SyntenyClc05G26040
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0035267 - NuA4 histone acetyltransferase complex (cellular component)
InterPro domainsIPR012423 - Chromatin modification-related protein Eaf7/MRGBP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135149.1 uncharacterized protein LOC101212766 isoform X2 [Cucumis sativus]5.3e-5889.21Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGREEEQDG+SVHSPCKAPPSSASSLPKE PQIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

XP_008446430.1 PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo]1.4e-5889.93Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGREEEQDG+SVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

XP_022945110.1 uncharacterized protein LOC111449449 [Cucurbita moschata]9.0e-5889.21Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

XP_022968533.1 uncharacterized protein LOC111467738 [Cucurbita maxima]1.5e-5788.49Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPKEQ QIELELK+LQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

XP_038893367.1 uncharacterized protein LOC120082183 [Benincasa hispida]4.8e-5990.65Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

TrEMBL top hitse value%identityAlignment
A0A0A0KQU2 Uncharacterized protein2.5e-5889.21Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGREEEQDG+SVHSPCKAPPSSASSLPKE PQIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

A0A1S3BFV8 uncharacterized protein LOC1034891786.7e-5989.93Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGREEEQDG+SVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

A0A6J1FZZ7 uncharacterized protein LOC1114494494.3e-5889.21Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

A0A6J1HYA5 uncharacterized protein LOC1114677387.4e-5888.49Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGR+EEQDGMSVHSPCKAPPSSASSLPKEQ QIELELK+LQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

A0A6J1J1E0 uncharacterized protein LOC1114825262.8e-5788.49Show/hide
Query:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ
        MESGGKGREEEQDG+SVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQG             IHRHFVLFGLMEFLRRSFDR FSSDEVLQ
Subjt:  MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQ

Query:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES
        LLDRFYNLEMLKPDDEEMEILN EEDFCLPQTFFVKEES
Subjt:  LLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26470.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).1.3e-4671.85Show/hide
Query:  GGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQLLD
        GGK +EEEQDG+SVHSPCKA PSSASSL KEQ Q+ELEL+LL+ALEIYP VKL+G             IHRHFVL+GLME+L RSFDR F++DEVLQLLD
Subjt:  GGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQLLD

Query:  RFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEE
        RFYN+EMLK DDE+++ILNHEEDF LPQ+FF KEE
Subjt:  RFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCGGCGGCAAAGGGAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCACCGTCCTCCGCTTCATCTCTCCCCAAGGAACAACCCCA
GATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTGGTCAAACTGCAAGGCAAGTTTGCTTTAACACTATTCTATCTGTTTTTTAATTGCATACATC
GCCATTTTGTCCTCTTTGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCAGTTCTCTTCTGATGAGGTTCTACAGTTGTTGGATCGGTTCTATAACCTGGAGATG
CTGAAACCAGATGATGAGGAAATGGAAATTCTCAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGCGGCGGCAAAGGGAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCACCGTCCTCCGCTTCATCTCTCCCCAAGGAACAACCCCA
GATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTGGTCAAACTGCAAGGCAAGTTTGCTTTAACACTATTCTATCTGTTTTTTAATTGCATACATC
GCCATTTTGTCCTCTTTGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCAGTTCTCTTCTGATGAGGTTCTACAGTTGTTGGATCGGTTCTATAACCTGGAGATG
CTGAAACCAGATGATGAGGAAATGGAAATTCTCAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAGTCTTAA
Protein sequenceShow/hide protein sequence
MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGKFALTLFYLFFNCIHRHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEM
LKPDDEEMEILNHEEDFCLPQTFFVKEES