; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G26215 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G26215
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncell division topological specificity factor homolog, chloroplastic
Genome locationClcChr05:33819448..33820933
RNA-Seq ExpressionClc05G26215
SyntenyClc05G26215
Gene Ontology termsGO:0010020 - chloroplast fission (biological process)
GO:0032955 - regulation of division septum assembly (biological process)
InterPro domainsIPR005527 - Cell division topological specificity factor MinE
IPR036707 - Cell division topological specificity factor MinE superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601459.1 Cell division topological specificity factor-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-8084Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        +VDLS  V+RR G+KGIKPK  TMAHEND+IHSIS +DVESSA+YERSP+SLSQESFILSSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+ AT NT+LKDDGE S SAG IFDSLIA+GKG
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG

XP_004135443.3 cell division topological specificity factor homolog, chloroplastic [Cucumis sativus]2.2e-8284.92Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        + DLSS V+RR+G+KG +PK HTM+HENDS+HSISLE+VESS NYERS KSLS+ESFILSSMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV    NT+LKDDGE S SAGLIFDSL+ADGK
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK

XP_008446409.1 PREDICTED: cell division topological specificity factor homolog, chloroplastic [Cucumis melo]4.0e-8486.07Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILSSMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDDGE S SAGLIFDSL+ADGKG
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG

Query:  S
        S
Subjt:  S

XP_022957365.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita moschata]2.0e-8083.5Show/hide
Query:  PRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKM
        P+VDLS  V+RR G+KGIKPK  TMAHENDSIH IS +DVESSA+YERSP+SLSQESFILSSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKM
Subjt:  PRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKM

Query:  ILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK
        ILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+ AT NT+LKDDGE S SAG IFD+LIA+GK
Subjt:  ILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK

XP_023551705.1 cell division topological specificity factor homolog, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-8084.92Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        +VDLS  V+RR G+KGIKPK  TMAHENDSIHSIS +DVESSA+YERSP+SLSQESFILSSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEEV AT NT+LKDDGE S SAG IFDSLIA+GK
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK

TrEMBL top hitse value%identityAlignment
A0A0A0KQS2 Uncharacterized protein1.3e-8385.07Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        + DLSS V+RR+G+KG +PK HTM+HENDS+HSISLE+VESS NYERS KSLS+ESFILSSMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV    NT+LKDDGE S SAGLIFDSL+ADGKG
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG

Query:  S
        S
Subjt:  S

A0A1S3BEH9 cell division topological specificity factor homolog, chloroplastic1.9e-8486.07Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILSSMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDDGE S SAGLIFDSL+ADGKG
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG

Query:  S
        S
Subjt:  S

A0A5A7SVD6 Cell division topological specificity factor-like protein1.9e-8486.07Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        + D SS V+RR+G+KG +PK HTMAHENDS+HSISLE+VE+SA YE+S KSLSQESFILSSMNMNFLERL LAWRIIF P+S PK+ SNA IAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG
        LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEV A TNTDLKDDGE S SAGLIFDSL+ADGKG
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG

Query:  S
        S
Subjt:  S

A0A6J1H0C0 cell division topological specificity factor homolog, chloroplastic-like9.9e-8183.5Show/hide
Query:  PRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKM
        P+VDLS  V+RR G+KGIKPK  TMAHENDSIH IS +DVESSA+YERSP+SLSQESFILSSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKM
Subjt:  PRVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKM

Query:  ILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK
        ILLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEE+ AT NT+LKDDGE S SAG IFD+LIA+GK
Subjt:  ILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGK

A0A6J1K368 cell division topological specificity factor homolog, chloroplastic-like isoform X23.8e-8084Show/hide
Query:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI
        +VDLS  V+RR G+KGIKPK  TMAHEND IHSIS +DVESSA+YERSP+SLSQESFILSSM MNFLERLILAWRIIF P+ST K NSNAMIAKQRLKMI
Subjt:  RVDLSSSVYRRFGSKGIKPKRHTMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMI

Query:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG
        LLSDRCAVNDE KQKIVD++LS+LSDFVEIDSEDKVQFNVSTD DLRTIYSVTVPVRRVKA+YQGSEEV AT NT+LKDDGE S  AG IFDSLIA+GKG
Subjt:  LLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKG

SwissProt top hitse value%identityAlignment
Q9C4Z7 Cell division topological specificity factor homolog, chloroplastic7.7e-3858.82Show/hide
Query:  SSANYERSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
        ++ +YE SP    Q  ESF+ +++NM F +RL LAW+IIF P+   + +SNA IAKQRLKMIL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ 
Subjt:  SSANYERSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF

Query:  NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF
        NVSTD DL TIYSVTVPVRRVK EYQ  +E    TN + KD  +GS      F
Subjt:  NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF

Arabidopsis top hitse value%identityAlignment
AT1G69390.1 homologue of bacterial MinE 15.4e-3958.82Show/hide
Query:  SSANYERSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF
        ++ +YE SP    Q  ESF+ +++NM F +RL LAW+IIF P+   + +SNA IAKQRLKMIL SDRC V+DEAK+KIV+NI+  LSDFVEI+SE+KVQ 
Subjt:  SSANYERSPKSLSQ--ESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDSEDKVQF

Query:  NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF
        NVSTD DL TIYSVTVPVRRVK EYQ  +E    TN + KD  +GS      F
Subjt:  NVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGC
GCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCT
CCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCAT
ACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCT
CAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGC
GGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCA
GAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGT
TGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACAACGTCGTGGTTTCAGGTCCGAGTACGACGACCGTTGTTCAGCGCCAGACCCTGATAGAAGGGTCCCCAGTTTCCTCGGGTAAGGAGGTGAAGAGAGTGAAAGC
GCGGGAGAACCATTCGAATTCAAGGTTAAAGAAAACCAAACTCGAAAATGGCGATTCCTGGAGATCCAATGGCTTTTCCAACACTAGCTTCTTCTTATCCACGGCGTTCT
CCGACGTCATTTCATCCTCTCAAGGTCTGAAAATCAGTTTTCCTCGAGTGGACCTCTCTAGTTCTGTTTATAGACGATTTGGAAGTAAAGGAATAAAGCCAAAAAGGCAT
ACCATGGCACATGAAAATGATAGCATACACAGTATCTCCCTGGAAGATGTTGAGAGCTCAGCAAATTATGAACGATCACCAAAATCCTTAAGTCAAGAGAGCTTCATCCT
CAGTTCCATGAACATGAACTTTTTGGAACGATTAATATTGGCTTGGAGGATAATTTTTCCACCAACATCAACTCCTAAATTGAACTCTAATGCTATGATAGCCAAGCAGC
GGTTGAAGATGATTCTCTTGTCCGATCGATGTGCAGTGAATGACGAAGCTAAACAAAAGATTGTGGACAACATCTTGAGTACTCTTTCAGATTTTGTAGAAATAGATTCA
GAAGATAAAGTTCAATTTAATGTCTCTACTGATTTAGATCTCAGAACAATTTACTCTGTAACGGTGCCTGTGCGAAGGGTGAAGGCTGAATATCAAGGCAGTGAGGAGGT
TGAAGCAACCACGAATACAGACTTGAAAGATGATGGAGAAGGATCTGCCTCCGCAGGTCTCATTTTCGATTCGTTAATTGCAGATGGAAAAGGTTCTTAA
Protein sequenceShow/hide protein sequence
MHNVVVSGPSTTTVVQRQTLIEGSPVSSGKEVKRVKARENHSNSRLKKTKLENGDSWRSNGFSNTSFFLSTAFSDVISSSQGLKISFPRVDLSSSVYRRFGSKGIKPKRH
TMAHENDSIHSISLEDVESSANYERSPKSLSQESFILSSMNMNFLERLILAWRIIFPPTSTPKLNSNAMIAKQRLKMILLSDRCAVNDEAKQKIVDNILSTLSDFVEIDS
EDKVQFNVSTDLDLRTIYSVTVPVRRVKAEYQGSEEVEATTNTDLKDDGEGSASAGLIFDSLIADGKGS