; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc05G26360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G26360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L32, chloroplastic
Genome locationClcChr05:33920952..33922632
RNA-Seq ExpressionClc05G26360
SyntenyClc05G26360
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002677 - Ribosomal protein L32p
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574067.1 hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sororia]6.8e-6083.94Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAM   LPHSSPISGI+DRKDS P LVLP+FN ESD+D  NNCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
XP_022945635.1 uncharacterized protein LOC111449817 [Cucurbita moschata]6.8e-6083.94Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMAN LPHSSPI+GI+ RKDS P LVLP+FN ESD+D  NNCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
XP_022968104.1 uncharacterized protein LOC111467436 [Cucurbita maxima]3.1e-6084.67Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMA  LPHSSPISGI+D KDS P LVLP+FN ESD+D  NNCSI GFGFPSLSFS SMELMAVPK+KVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
XP_023541204.1 uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo]1.0e-6084.67Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAM   LPHSSPISGI+DRKDS P LVLP+FN ESD+DR NNCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
XP_038891873.1 uncharacterized protein LOC120081238 [Benincasa hispida]8.6e-6389.78Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RALE QTGSMLGLK MANALPHSSPISGI+DRKDSTP LVLP+FNQESDKDR NNCSI G GFP+LSFS SMELMAVPKKKVSP+KRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVIVRCKSCGKVKLPHYYCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
TrEMBL top hitse value%identityAlignment
A0A0A0KQP7 50S ribosomal protein L32, chloroplastic3.6e-5985.29Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRIMRALEGQ GSMLGLKAMA  LPHSSPISG++  KDS P LVLP+FNQE D D+TNNCSI GFGFPSLSFS SMELMAVPKKKVSPHKR IRN PK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSA
        ALKPIPVIVRCK+CGKVKLPHYYCCSGRPG+Q+NSA
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSA
A0A5A7SYB6 50S ribosomal protein L32, chloroplastic1.7e-5683.82Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRIMRALEGQTGSMLGLKAMA  LPHSS   G++  KDS P LVLP+FNQESD+DR NNCSI GFGFPSL FS SMELMAVPKKKVSPHKR IRN PK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSA
        ALKPIPVI+RCK CGKVKLPHYYCCSGRPGEQ+NSA
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSA
A0A6J1DBR3 50S ribosomal protein L32, chloroplastic2.4e-5882.86Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRIMRA+EGQT SMLGLKAMAN LPH SP+SGI+DRKDSTP LVLP+FN ESD DR  NCS  GFGFPSLSFS SMELMAVPK+KVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCS---GRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCS   GR GEQ+NS R
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCS---GRPGEQNNSAR
A0A6J1G1I2 50S ribosomal protein L32, chloroplastic3.3e-6083.94Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMAN LPHSSPI+GI+ RKDS P LVLP+FN ESD+D  NNCSI GFGFPSLSFS SMELMAVPK+K SPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
A0A6J1HYN6 50S ribosomal protein L32, chloroplastic1.5e-6084.67Show/hide
Query:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK
        MALRI+RA+EGQTGSM GLKAMA  LPHSSPISGI+D KDS P LVLP+FN ESD+D  NNCSI GFGFPSLSFS SMELMAVPK+KVSPHKRGIRNGPK
Subjt:  MALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNGPK

Query:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
        ALKPIPVI+RCKSCGKVKLPH+YCCSGR GEQ+NSAR
Subjt:  ALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR
SwissProt top hitse value%identityAlignment
Q0BTE2 50S ribosomal protein L324.2e-0447.73Show/hide
Query:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
        MAVPKKK SP +RG+R   +AL        C +CG++K PH+ C
Subjt:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
Q1GT88 50S ribosomal protein L323.2e-0447.73Show/hide
Query:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
        MAVPK+K SP KRG+R    +LK +     C +CG++K PH  C
Subjt:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
Q2N923 50S ribosomal protein L326.5e-0550Show/hide
Query:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
        MAVPK+KVSPH+RG R    +LK +     C +CG++K PH  C
Subjt:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
Q5FUN5 50S ribosomal protein L329.4e-0443.18Show/hide
Query:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
        MAVPK+K +P +RG+R   +AL  +     C +CG++K PH+ C
Subjt:  MAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYC
Arabidopsis top hitse value%identityAlignment
AT1G26740.1 Ribosomal L32p protein family1.9e-3151.94Show/hide
Query:  MALRI--MRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNG
        MALR+  ++    ++  +L  +++++     SP++G  DR  S P LVLP+F+Q  ++         GFG PS +F+ SMELMAVPKKK+S HKRGIRNG
Subjt:  MALRI--MRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASMELMAVPKKKVSPHKRGIRNG

Query:  PKALKPIPVIVRCKSCGKVKLPHYYCCSG
        PKALKP+PVI+RC+SCG+VKLPH++CCSG
Subjt:  PKALKPIPVIVRCKSCGKVKLPHYYCCSG
AT1G69485.1 Ribosomal L32p protein family5.4e-2377.05Show/hide
Query:  MELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYCCSGR---PGEQNNS
        MELMAVPKKK+S HKRGIRNGPKA KP PVI+RC+SCG+VKLPH+YCCSG    P EQ+NS
Subjt:  MELMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYCCSGR---PGEQNNS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGGCTTTGGGCTCTTGGGCCGAACAAAGGGATCCAAGCCCGTCACCAAGCCATTGGCCCAGCTCAATGTGCAAACGACGCCGTCGACTATGGCGTTGAGGATTAT
GAGGGCGCTCGAGGGTCAGACGGGTTCAATGCTAGGGCTTAAAGCGATGGCTAATGCTTTACCCCATTCTTCGCCGATTTCTGGGATCGTGGACCGTAAGGACTCCACAC
CCCTGCTTGTTCTTCCGGATTTTAACCAGGAATCTGATAAAGATAGAACCAACAACTGCAGTATTGGGGGGTTTGGTTTCCCTAGCTTGTCTTTTTCAGCGTCCATGGAG
CTCATGGCTGTTCCTAAGAAGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGTCCAAAGGCTCTAAAACCTATTCCAGTTATAGTTCGGTGCAAGAGTTGTGGTAA
AGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGGCCAGGGGAGCAGAATAACTCAGCCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGGCTTTGGGCTCTTGGGCCGAACAAAGGGATCCAAGCCCGTCACCAAGCCATTGGCCCAGCTCAATGTGCAAACGACGCCGTCGACTATGGCGTTGAGGATTAT
GAGGGCGCTCGAGGGTCAGACGGGTTCAATGCTAGGGCTTAAAGCGATGGCTAATGCTTTACCCCATTCTTCGCCGATTTCTGGGATCGTGGACCGTAAGGACTCCACAC
CCCTGCTTGTTCTTCCGGATTTTAACCAGGAATCTGATAAAGATAGAACCAACAACTGCAGTATTGGGGGGTTTGGTTTCCCTAGCTTGTCTTTTTCAGCGTCCATGGAG
CTCATGGCTGTTCCTAAGAAGAAGGTTTCTCCACATAAAAGGGGCATAAGAAATGGTCCAAAGGCTCTAAAACCTATTCCAGTTATAGTTCGGTGCAAGAGTTGTGGTAA
AGTGAAGCTGCCTCACTACTATTGTTGCAGTGGAAGGCCAGGGGAGCAGAATAACTCAGCCAGATGA
Protein sequenceShow/hide protein sequence
MPGFGLLGRTKGSKPVTKPLAQLNVQTTPSTMALRIMRALEGQTGSMLGLKAMANALPHSSPISGIVDRKDSTPLLVLPDFNQESDKDRTNNCSIGGFGFPSLSFSASME
LMAVPKKKVSPHKRGIRNGPKALKPIPVIVRCKSCGKVKLPHYYCCSGRPGEQNNSAR