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Clc05G26580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G26580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:34026031..34027133
RNA-Seq ExpressionClc05G26580
SyntenyClc05G26580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601435.1 hypothetical protein SDJN03_06668, partial [Cucurbita argyrosperma subsp. sororia]2.3e-0453.95Show/hide
Query:  ALTSTPSLKRQRSITHTNFPFLSL-SPSFSCFFF-LHRLALSFHFLCISLPPDF-LFTFSRISLEEEGSSHWHFSF
        ALTSTPSL+RQRSITH NFPFLSL S  F  FFF L  L  S HF     PP      F  +      SS+ HFSF
Subjt:  ALTSTPSLKRQRSITHTNFPFLSL-SPSFSCFFF-LHRLALSFHFLCISLPPDF-LFTFSRISLEEEGSSHWHFSF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACGCTATTGGACTGTCGCGGAGGGAGGAGGCACCGACCGGGTAACACCCAAAGATAAGTTCCCTTCCCCGATCTGGGACTTGTTCAATATTGTTTTCTCCTT
TTTCTATTTATTTCTTTTCTATGCTTTGACGTCGACTCCAAGCTTGAAACGACAGCGATCTATTACTCACACCAACTTCCCCTTTCTCTCTCTTTCTCCCTCATTTTCTT
GCTTCTTCTTCCTCCACCGTCTTGCCCTTTCCTTTCATTTTCTCTGCATTTCACTCCCGCCGGACTTCCTTTTCACATTCTCAAGAATTAGTCTTGAGGAAGAAGGTTCC
AGTCATTGGCATTTTAGTTTCGAGATGCTTAATGATGGTGGAATTTGGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTACGCTATTGGACTGTCGCGGAGGGAGGAGGCACCGACCGGGTAACACCCAAAGATAAGTTCCCTTCCCCGATCTGGGACTTGTTCAATATTGTTTTCTCCTT
TTTCTATTTATTTCTTTTCTATGCTTTGACGTCGACTCCAAGCTTGAAACGACAGCGATCTATTACTCACACCAACTTCCCCTTTCTCTCTCTTTCTCCCTCATTTTCTT
GCTTCTTCTTCCTCCACCGTCTTGCCCTTTCCTTTCATTTTCTCTGCATTTCACTCCCGCCGGACTTCCTTTTCACATTCTCAAGAATTAGTCTTGAGGAAGAAGGTTCC
AGTCATTGGCATTTTAGTTTCGAGATGCTTAATGATGGTGGAATTTGGGATTAG
Protein sequenceShow/hide protein sequence
MALRYWTVAEGGGTDRVTPKDKFPSPIWDLFNIVFSFFYLFLFYALTSTPSLKRQRSITHTNFPFLSLSPSFSCFFFLHRLALSFHFLCISLPPDFLFTFSRISLEEEGS
SHWHFSFEMLNDGGIWD