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Clc05G27310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G27310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Genome locationClcChr05:34635504..34636677
RNA-Seq ExpressionClc05G27310
SyntenyClc05G27310
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601379.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.7e-7180.9Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPFPP---SSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI
        MAWT  +  +FH LLPSLF  LHKP  PP FFS PS+     RLSP L LPF P   SSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDI
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPFPP---SSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI

Query:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        YGDSVQEVVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDG+
Subjt:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

XP_004135224.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic [Cucumis sativus]4.7e-7484.97Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPSTP-RLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV
        MAWT ++S SF+ LLPSLF   HKP+LPPSFFS  PSTP RLSP LTL  P SSFP HIC+AAEYKFPDPIPEFAVAETEKFRAHLLQKLSK+DIYGDS+
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPSTP-RLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV

Query:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        Q+VVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDD +
Subjt:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

XP_008446250.1 PREDICTED: uncharacterized protein LOC103489037 [Cucumis melo]8.1e-7483.82Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPST-PRLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV
        MAWT S S +   LLP LF   HKP+LP SFFS  PS  PRLSP LTLP   SSFP HIC+AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDS+
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPST-PRLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV

Query:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        Q+VVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDD +
Subjt:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

XP_023549642.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-7181.82Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPF-PPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG
        MAWT  +  +FH LLP LF  LHKPN PP FFS PS+     RLSP L LPF P SSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYG
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPF-PPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG

Query:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        DSVQEVVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDG+
Subjt:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

XP_038891304.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida]1.1e-7585.08Show/hide
Query:  MAWTVSSSSSFHLL--LPSLFPLLHKPNLPPSFFSIPSTP----RLS-PPLTLPFPP---SSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSK
        M WT  +SSSFHLL    SLFP LHKPNLPPSFFS PSTP    RLS   LTLPF P   SSFPNHIC AAEYKFPDPIPEFAVAETEKFRAHLLQKLSK
Subjt:  MAWTVSSSSSFHLL--LPSLFPLLHKPNLPPSFFSIPSTP----RLS-PPLTLPFPP---SSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSK

Query:  KDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        KDIYGDSV EVVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD +
Subjt:  KDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

TrEMBL top hitse value%identityAlignment
A0A0A0KTS5 Uncharacterized protein2.3e-7484.97Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPSTP-RLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV
        MAWT ++S SF+ LLPSLF   HKP+LPPSFFS  PSTP RLSP LTL  P SSFP HIC+AAEYKFPDPIPEFAVAETEKFRAHLLQKLSK+DIYGDS+
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPSTP-RLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV

Query:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        Q+VVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDD +
Subjt:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

A0A1S3BEL5 uncharacterized protein LOC1034890373.9e-7483.82Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPST-PRLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV
        MAWT S S +   LLP LF   HKP+LP SFFS  PS  PRLSP LTLP   SSFP HIC+AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDS+
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFS-IPST-PRLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV

Query:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        Q+VVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDD +
Subjt:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

A0A6J1DCY7 protein PLASTID REDOX INSENSITIVE 2-like2.4e-6373.99Show/hide
Query:  WTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPSTP----RLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV
        WT++      L LP     L    +P  FF  PS P    RLSP L LP+P       IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKD+YGDSV
Subjt:  WTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPSTP----RLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSV

Query:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
         EVVGICTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWN+WTGDDG+
Subjt:  QEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

A0A6J1GWZ9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like5.3e-7180.79Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPFPP--SSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIY
        MAWT  +  +FH LLP LF  LHKP  PP FFS PS+     RLSP L LPF P  SSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIY
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPFPP--SSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIY

Query:  GDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        GDSVQEVVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDG+
Subjt:  GDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

A0A6J1KAW7 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like5.3e-7180.68Show/hide
Query:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPF-PPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG
        MAWT  +  +FH LLP LF  LHKP  PP FFS PS+     RLSP L LPF P SSF N IC AAEYKFPDPIPEFA+AETEKFRAHLL KLSKKDIYG
Subjt:  MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPST----PRLSPPLTLPF-PPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG

Query:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS
        DSVQEVVG+CTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDG+
Subjt:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGS

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic3.1e-3661.47Show/hide
Query:  EYKFPDPIPEFAVAETEKFRAHLLQKL--SKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVD
        +YKFPDPIPEFA  ET KFR H+  +L   K+D +GD V+E+V +CTEI  TF+  +Y GPGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ +VD
Subjt:  EYKFPDPIPEFAVAETEKFRAHLLQKL--SKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVD

Query:  KDWNQWTGD
        KDW  WTG+
Subjt:  KDWNQWTGD

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic1.3e-3449.04Show/hide
Query:  LHKPNLPPSFFSIPSTPRLSPPL------TLPFPPSSFPNHICSAA--EYKFPDPIPEFAVAETEKFRAHLLQKLSKK--DIYGDSVQEVVGICTEIFNT
        L+ P L  S  S PS+ RL   +        P P         +AA  +YKFPDPIPEFA  ET KF+ H++ +L +K  D +G+ V+E+V +CTEI  T
Subjt:  LHKPNLPPSFFSIPSTPRLSPPL------TLPFPPSSFPNHICSAA--EYKFPDPIPEFAVAETEKFRAHLLQKLSKK--DIYGDSVQEVVGICTEIFNT

Query:  FMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGD
        F+  +Y GPGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ ++DKDW  WTG+
Subjt:  FMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGD

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic5.3e-5278.76Show/hide
Query:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +C AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLVIPFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNQWTGDD
        HVDKDW +WTG D
Subjt:  HVDKDWNQWTGDD

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein3.8e-5378.76Show/hide
Query:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +C AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLVIPFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNQWTGDD
        HVDKDW +WTG D
Subjt:  HVDKDWNQWTGDD

AT1G10522.2 unknown protein3.8e-5378.76Show/hide
Query:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +C AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLVIPFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNQWTGDD
        HVDKDW +WTG D
Subjt:  HVDKDWNQWTGDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGACTGTATCTTCTTCTTCTTCTTTCCATCTCCTCCTCCCTTCTCTCTTTCCCCTCCTCCATAAACCCAACCTTCCACCATCCTTCTTCTCCATTCCTTCAAC
TCCTCGCCTCTCCCCCCCTCTCACTCTTCCATTTCCACCCTCCTCCTTCCCAAACCACATTTGCAGCGCCGCCGAATACAAATTCCCCGACCCAATTCCCGAATTCGCCG
TCGCTGAGACCGAGAAGTTCAGGGCTCATCTACTTCAAAAACTCTCTAAGAAAGATATTTACGGGGATTCCGTTCAAGAGGTCGTCGGAATATGCACTGAGATATTCAAT
ACCTTTATGCACACCGAGTATGGCGGGCCTGGGACTTTGTTGGTTATACCTTTCATAGACATGTCTGATACAATCAATGAACGAGGATTACCTGGAGGCCCTCAAGCTGC
TCGTGCTGCAGTCAAATGGGCTCAGGATCATGTTGATAAAGACTGGAACCAGTGGACTGGTGATGATGGTTCTTTAGTCCAAAAGAAGGGGGGGGCGGTAAGCGTGAGAC
TGATAATTTACTACTTCCATGTCCACAAGAGAAAATGCAATGGACACGATTTCCTTACCGATGACGTTGATCAAGCAGTTCCTCCCTGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGGACTGTATCTTCTTCTTCTTCTTTCCATCTCCTCCTCCCTTCTCTCTTTCCCCTCCTCCATAAACCCAACCTTCCACCATCCTTCTTCTCCATTCCTTCAAC
TCCTCGCCTCTCCCCCCCTCTCACTCTTCCATTTCCACCCTCCTCCTTCCCAAACCACATTTGCAGCGCCGCCGAATACAAATTCCCCGACCCAATTCCCGAATTCGCCG
TCGCTGAGACCGAGAAGTTCAGGGCTCATCTACTTCAAAAACTCTCTAAGAAAGATATTTACGGGGATTCCGTTCAAGAGGTCGTCGGAATATGCACTGAGATATTCAAT
ACCTTTATGCACACCGAGTATGGCGGGCCTGGGACTTTGTTGGTTATACCTTTCATAGACATGTCTGATACAATCAATGAACGAGGATTACCTGGAGGCCCTCAAGCTGC
TCGTGCTGCAGTCAAATGGGCTCAGGATCATGTTGATAAAGACTGGAACCAGTGGACTGGTGATGATGGTTCTTTAGTCCAAAAGAAGGGGGGGGCGGTAAGCGTGAGAC
TGATAATTTACTACTTCCATGTCCACAAGAGAAAATGCAATGGACACGATTTCCTTACCGATGACGTTGATCAAGCAGTTCCTCCCTGTCAATGA
Protein sequenceShow/hide protein sequence
MAWTVSSSSSFHLLLPSLFPLLHKPNLPPSFFSIPSTPRLSPPLTLPFPPSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFN
TFMHTEYGGPGTLLVIPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGSLVQKKGGAVSVRLIIYYFHVHKRKCNGHDFLTDDVDQAVPPCQ