CuGenDBv2

Gene ID	Clc05G27680
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	hybrid signal transduction histidine kinase L
Genome location	ClcChr05:34894639..34895664
RNA-Seq Expression	Clc05G27680
Synteny	Clc05G27680
Gene Ontology terms	GO:0016310 - phosphorylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8648720.1 hypothetical protein Csa_008998 [Cucumis sativus]

3.5e-70

83.94

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Query:  MSELQQQQ-QPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPK
        MSELQQQQ Q Q Q Q QQQQP +VYPDTAAT AG Q PP HHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPK
Subjt:  MSELQQQQ-QPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPK

Query:  LHPDKEGDIEFGFDLKNPNGKGKFPSG-------GNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        LHPDKEGDIEFGFDL+NP+GKGKFPSG       GNGGSKGKGNGNG   G +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA+GHH
Subjt:  LHPDKEGDIEFGFDLKNPNGKGKFPSG-------GNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

XP_008446202.1 PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo]

1.2e-70

83.16

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Query:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL
        MSELQQQQ+   Q Q QQQQP +VYPDTAAT AG Q PPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPKL
Subjt:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL

Query:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        HPDKEGDIEFGFDL+NP+GKGKFP GGNG   G G   G GNGNGP   +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA GHH
Subjt:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

XP_011655621.2 la-related protein Larp4B [Cucumis sativus]

3.5e-70

83.94

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Query:  MSELQQQQ-QPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPK
        MSELQQQQ Q Q Q Q QQQQP +VYPDTAAT AG Q PP HHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPK
Subjt:  MSELQQQQ-QPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPK

Query:  LHPDKEGDIEFGFDLKNPNGKGKFPSG-------GNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        LHPDKEGDIEFGFDL+NP+GKGKFPSG       GNGGSKGKGNGNG   G +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA+GHH
Subjt:  LHPDKEGDIEFGFDLKNPNGKGKFPSG-------GNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

XP_022956516.1 uncharacterized protein LOC111458233 [Cucurbita moschata]

1.8e-61

77.19

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Query:  QPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIEFGFDLKNP
        Q QQQQP  VYP+TAA  G QPPPSHHSNGSFGAVFIVLAVI+VIS +AC LGRLCNRR ENQR KPEKTHGGARPRGKEPKLHPDKEGDIEFG DL+NP
Subjt:  QPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIEFGFDLKNP

Query:  NGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHT--DHHEGDFNFKASGHHV
        NGKGK PSGGNGG+K      GNG+GP+GPNGH + FKPFEN GE R +IKH   DHHEGDF FKA+ H V
Subjt:  NGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHT--DHHEGDFNFKASGHHV

XP_038892720.1 uncharacterized protein LOC120081701 [Benincasa hispida]

6.7e-77

89.78

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Query:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARPRGKEPKLHP
        MSELQQQQQ QPQ Q QQQQP FVYP+TAAT G QPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEKTH GARPRGKEPKLHP
Subjt:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARPRGKEPKLHP

Query:  DKEGDIEFGFDLKNPNG-KGKFP-SGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHHV
        DKEGDIEFGFDL+NPNG KGKFP SGGNGGSKGK NGNGNG   +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA+GHHV
Subjt:  DKEGDIEFGFDLKNPNG-KGKFP-SGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHHV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTP5 Uncharacterized protein

1.3e-70

83.85

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Query:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL
        MSELQQQ   QPQ Q QQQQP +VYPDTAAT AG Q PP HHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPKL
Subjt:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL

Query:  HPDKEGDIEFGFDLKNPNGKGKFPSG-------GNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        HPDKEGDIEFGFDL+NP+GKGKFPSG       GNGGSKGKGNGNG   G +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA+GHH
Subjt:  HPDKEGDIEFGFDLKNPNGKGKFPSG-------GNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

A0A1S3BF63 hybrid signal transduction histidine kinase L

5.9e-71

83.16

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Query:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL
        MSELQQQQ+   Q Q QQQQP +VYPDTAAT AG Q PPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPKL
Subjt:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL

Query:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        HPDKEGDIEFGFDL+NP+GKGKFP GGNG   G G   G GNGNGP   +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA GHH
Subjt:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

A0A5A7ST81 Hybrid signal transduction histidine kinase L

5.9e-71

83.16

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Query:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL
        MSELQQQQ+   Q Q QQQQP +VYPDTAAT AG Q PPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPKL
Subjt:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL

Query:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        HPDKEGDIEFGFDL+NP+GKGKFP GGNG   G G   G GNGNGP   +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA GHH
Subjt:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

A0A6J1GWS9 uncharacterized protein LOC111458233

8.5e-62

77.19

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Query:  QPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIEFGFDLKNP
        Q QQQQP  VYP+TAA  G QPPPSHHSNGSFGAVFIVLAVI+VIS +AC LGRLCNRR ENQR KPEKTHGGARPRGKEPKLHPDKEGDIEFG DL+NP
Subjt:  QPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIEFGFDLKNP

Query:  NGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHT--DHHEGDFNFKASGHHV
        NGKGK PSGGNGG+K      GNG+GP+GPNGH + FKPFEN GE R +IKH   DHHEGDF FKA+ H V
Subjt:  NGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHT--DHHEGDFNFKASGHHV

E5GBJ1 Uncharacterized protein

5.9e-71

83.16

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Query:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL
        MSELQQQQ+   Q Q QQQQP +VYPDTAAT AG Q PPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN QRPKPEK+H GARP RGKEPKL
Subjt:  MSELQQQQQPQPQPQPQQQQPNFVYPDTAAT-AGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVEN-QRPKPEKTHGGARP-RGKEPKL

Query:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH
        HPDKEGDIEFGFDL+NP+GKGKFP GGNG   G G   G GNGNGP   +GPNGHGNSFKPFEN GETRSEIKHTDHHEGDFNFKA GHH
Subjt:  HPDKEGDIEFGFDLKNPNGKGKFPSGGNGGSKGKG--NGNGNGNGP---HGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G23530.1 unknown protein

8.8e-11

38.29

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Query:  QQQQPNFVYPDT----AATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNR------RVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIE
        Q QQP  VYP+           +P  S  S+G+FG VFIVLAVI V+SALAC  GRLCNR      +  ++ PK EK         +  +  P + GD++
Subjt:  QQQQPNFVYPDT----AATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNR------RVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIE

Query:  FGFDLKNPNGKGKFPSGGNGGSK----------GKGNGNGNGNGPHGPN-GHGNSFKPFENSGETRSEIKHTDHH
        FGFD+K P    K PSG +GG             +G   G G GP  PN  H   FK  EN           DHH
Subjt:  FGFDLKNPNGKGKFPSGGNGGSK----------GKGNGNGNGNGPHGPN-GHGNSFKPFENSGETRSEIKHTDHH

AT1G70470.1 unknown protein

1.0e-11

40.82

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Query:  QPQQQQPNFVYPDT-AATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNR-------RVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIE
        QPQ+ Q   VYP T ++T+    P S  S+GSFG  FIVLA I+V++ALAC  GRLCNR       +  N+  K EK         +  +  P + GD+E
Subjt:  QPQQQQPNFVYPDT-AATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNR-------RVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIE

Query:  FGFDLKNPNGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKP
        FGFD+K P    K P+G NGG    G  N  G G  G  G     +P
Subjt:  FGFDLKNPNGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKP

Sequences

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CDS sequence

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ATGTCGGAACTTCAACAGCAACAGCAACCGCAACCGCAACCGCAACCGCAGCAACAACAGCCGAATTTTGTTTATCCCGACACGGCGGCGACAGCCGGCATCCAACCTCC
GCCTTCCCACCATTCCAACGGCTCATTTGGGGCAGTTTTTATAGTTCTTGCGGTTATTGTTGTCATATCAGCTCTTGCTTGTTTCCTTGGCCGCCTCTGCAACCGGCGAG
TTGAAAACCAGAGGCCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCTAGAGGAAAAGAACCCAAATTGCATCCTGATAAAGAAGGAGATATCGAATTTGGATTTGAT
TTAAAAAACCCAAATGGGAAAGGTAAATTCCCATCTGGTGGAAATGGAGGAAGCAAAGGCAAAGGCAATGGCAATGGCAATGGTAATGGGCCGCATGGGCCTAATGGCCA
TGGAAATAGCTTCAAACCCTTTGAAAATAGCGGTGAAACGAGAAGCGAAATCAAACATACAGATCATCATGAAGGAGATTTCAATTTCAAAGCTTCAGGGCATCATGTTT
GA

mRNA sequence

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CTTGTTTTATGTTCTATGTCCAACAATATAATCATCAATCAAAACACAACTTCTTCTGTTCATTAAAACTCAAAATTTAAAGTACCAGAAGGAATATGTTTAGCTGTCTG
TCTCTTTACCAAAAGAAAGTTCCTCCCTTTTTGACCTCTTCTCTTTCTCTCTCCCTTAAACCCCATTTCTTAGAATCCCATTCATTATACATAACCCACTTCCATATGCA
ACCTTCTTGCTTCTTTCTTCAGTAAATTCCATCTCTCCCTTCTCTTCCACTCAAAGCACCACCTTCATTTCATATCACCTCCTTAATAGCCTAAAATTTCAATCCCCCAC
TTCCTTAATTTCTCCCAACTCCCGATATTCCCAAAACCTTGGCCGACATGTCGGAACTTCAACAGCAACAGCAACCGCAACCGCAACCGCAACCGCAGCAACAACAGCCG
AATTTTGTTTATCCCGACACGGCGGCGACAGCCGGCATCCAACCTCCGCCTTCCCACCATTCCAACGGCTCATTTGGGGCAGTTTTTATAGTTCTTGCGGTTATTGTTGT
CATATCAGCTCTTGCTTGTTTCCTTGGCCGCCTCTGCAACCGGCGAGTTGAAAACCAGAGGCCGAAGCCGGAGAAAACCCACGGCGGCGCTCGTCCTAGAGGAAAAGAAC
CCAAATTGCATCCTGATAAAGAAGGAGATATCGAATTTGGATTTGATTTAAAAAACCCAAATGGGAAAGGTAAATTCCCATCTGGTGGAAATGGAGGAAGCAAAGGCAAA
GGCAATGGCAATGGCAATGGTAATGGGCCGCATGGGCCTAATGGCCATGGAAATAGCTTCAAACCCTTTGAAAATAGCGGTGAAACGAGAAGCGAAATCAAACATACAGA
TCATCATGAAGGAGATTTCAATTTCAAAGCTTCAGGGCATCATGTTTGATGGGTACTTGTAAAACAACAGAGAAACATGAAAAATCCCAATTTCATCGTATCAAGTTATA
GCAGTGTGGTCTTTTTTCTCTTTCCTTTTTTTTTTT

Protein sequence

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MSELQQQQQPQPQPQPQQQQPNFVYPDTAATAGIQPPPSHHSNGSFGAVFIVLAVIVVISALACFLGRLCNRRVENQRPKPEKTHGGARPRGKEPKLHPDKEGDIEFGFD
LKNPNGKGKFPSGGNGGSKGKGNGNGNGNGPHGPNGHGNSFKPFENSGETRSEIKHTDHHEGDFNFKASGHHV

Clc05G27680 (gene) of Watermelon (cordophanus) v2 genome