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Clc05G28100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G28100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr05:35204235..35205810
RNA-Seq ExpressionClc05G28100
SyntenyClc05G28100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601537.1 hypothetical protein SDJN03_06770, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1151.14Show/hide
Query:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHR
        +VSFFVK++ES+P+F LQLP  + S      KR + WIK  ++  +        LDVH K IC+ +NQRS R VCSVFCT+SF RNHR
Subjt:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHR

KAG7032311.1 Plant intracellular Ras-group-related LRR protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-1251.69Show/hide
Query:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRL
        MVSFFVK++ES+P+F LQLP  + S      KR + WIK  ++  +        LDVH K IC+ +N+RS R VCSVFCT+SF RNHRL
Subjt:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRL

XP_022956675.1 uncharacterized protein LOC111458328 isoform X3 [Cucurbita moschata]6.1e-1565.62Show/hide
Query:  LDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY
        LDVH KKIC+ +NQRS R VCSVFCT+SF RNHRL         EE S SGQQG W++MHWGPY
Subjt:  LDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY

XP_022956678.1 uncharacterized protein LOC111458328 isoform X6 [Cucurbita moschata]8.7e-2253.39Show/hide
Query:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEE
        MVSFFVK++ES+P+F LQLP  + S      KR + WIK  ++  +        LDVH KKIC+ +NQRS R VCSVFCT+SF RNHRL         EE
Subjt:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEE

Query:  NSKSGQQGLWMRMHWGPY
         S SGQQG W++MHWGPY
Subjt:  NSKSGQQGLWMRMHWGPY

XP_022965042.1 uncharacterized protein LOC111500016 isoform X4 [Cucurbita maxima]2.3e-1450.53Show/hide
Query:  KSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY
        +S+  + +KR + WIK  ++  +        LDVH  KI +C+NQRS R VCSVFCTKSF RNHRL         EE S SGQQG W++MHWGPY
Subjt:  KSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY

TrEMBL top hitse value%identityAlignment
A0A0A0KS70 Uncharacterized protein3.8e-0748.72Show/hide
Query:  NFALQLPFTI-KSVHLTIFKRQAWIKLIVEDDKKLRLR-----FSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRN
        + ALQLPF +  S+  TI          ++  K  R +       QLDVHV+ ICYCQ QRSLRP+CSVFC+KSFF N
Subjt:  NFALQLPFTI-KSVHLTIFKRQAWIKLIVEDDKKLRLR-----FSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRN

A0A6J1GX72 uncharacterized protein LOC111458328 isoform X43.3e-0667.5Show/hide
Query:  LDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPE
        LDVH KKIC+ +NQRS R VCSVFCT+SF RNHR +   E
Subjt:  LDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPE

A0A6J1GXS7 uncharacterized protein LOC111458328 isoform X64.2e-2253.39Show/hide
Query:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEE
        MVSFFVK++ES+P+F LQLP  + S      KR + WIK  ++  +        LDVH KKIC+ +NQRS R VCSVFCT+SF RNHRL         EE
Subjt:  MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEE

Query:  NSKSGQQGLWMRMHWGPY
         S SGQQG W++MHWGPY
Subjt:  NSKSGQQGLWMRMHWGPY

A0A6J1GYF3 uncharacterized protein LOC111458328 isoform X32.9e-1565.62Show/hide
Query:  LDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY
        LDVH KKIC+ +NQRS R VCSVFCT+SF RNHRL         EE S SGQQG W++MHWGPY
Subjt:  LDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY

A0A6J1HJ99 uncharacterized protein LOC111500016 isoform X41.1e-1450.53Show/hide
Query:  KSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY
        +S+  + +KR + WIK  ++  +        LDVH  KI +C+NQRS R VCSVFCTKSF RNHRL         EE S SGQQG W++MHWGPY
Subjt:  KSVHLTIFKRQA-WIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWMRMHWGPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTTCTTCGTCAAAAAATCAGAATCCATTCCCAACTTTGCATTACAGCTTCCATTTACCATTAAGTCCGTCCACCTCACGATTTTTAAGAGACAGGCATGGAT
CAAACTAATAGTTGAAGACGACAAGAAACTGCGTCTGCGGTTCAGCCAACTGGATGTACATGTGAAGAAAATCTGCTATTGTCAGAACCAGAGATCTCTGAGGCCAGTTT
GCTCTGTTTTCTGTACCAAGAGTTTCTTTCGCAATCACAGATTGAATCCAATCCCTGAACTTGAAAATTTTGAGGAAAACTCCAAAAGTGGACAGCAAGGACTTTGGATG
AGAATGCATTGGGGACCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTTCTTCGTCAAAAAATCAGAATCCATTCCCAACTTTGCATTACAGCTTCCATTTACCATTAAGTCCGTCCACCTCACGATTTTTAAGAGACAGGCATGGAT
CAAACTAATAGTTGAAGACGACAAGAAACTGCGTCTGCGGTTCAGCCAACTGGATGTACATGTGAAGAAAATCTGCTATTGTCAGAACCAGAGATCTCTGAGGCCAGTTT
GCTCTGTTTTCTGTACCAAGAGTTTCTTTCGCAATCACAGATTGAATCCAATCCCTGAACTTGAAAATTTTGAGGAAAACTCCAAAAGTGGACAGCAAGGACTTTGGATG
AGAATGCATTGGGGACCATATTGA
Protein sequenceShow/hide protein sequence
MVSFFVKKSESIPNFALQLPFTIKSVHLTIFKRQAWIKLIVEDDKKLRLRFSQLDVHVKKICYCQNQRSLRPVCSVFCTKSFFRNHRLNPIPELENFEENSKSGQQGLWM
RMHWGPY