CuGenDBv2

Gene ID	Clc05G29140
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	cytochrome c oxidase assembly factor 5
Genome location	ClcChr05:36017210..36018284
RNA-Seq Expression	Clc05G29140
Synteny	Clc05G29140
Gene Ontology terms	GO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process) GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR018793 - Cytochrome c oxidase assembly protein PET191

Homology

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GenBank top hits

e value

%identity

Alignment

ADN34196.1 hypothetical protein [Cucumis melo subsp. melo]

2.8e-26

95.16

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASFH
        MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ   H
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASFH

KAG7031931.1 hypothetical protein SDJN02_05973 [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-27

98.36

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASF
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQASF
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASF

KYP51355.1 hypothetical protein KK1_026786 [Cajanus cajan]

6.8e-25

93.33

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAS
        MSKSCKGLAMELVKCLSESDCVKV+ R+YREC GEKSPCIPSECVGLRETYFNCKRGQAS
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAS

XP_008446948.1 PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo]

8.1e-26

100

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

XP_022956695.1 cytochrome c oxidase assembly factor 5 [Cucurbita moschata]

1.8e-25

98.28

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRS4 Uncharacterized protein

3.9e-26

100

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

A0A1S3BGA9 cytochrome c oxidase assembly factor 5

3.9e-26

100

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

A0A6J1CDL1 cytochrome c oxidase assembly factor 5

3.9e-26

100

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

A0A6J1IEJ6 cytochrome c oxidase assembly factor 5

8.7e-26

98.28

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

E5GCJ7 Uncharacterized protein

1.3e-26

95.16

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASFH
        MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ   H
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASFH

SwissProt top hits

e value

%identity

Alignment

O42921 Mitochondrial protein pet191 homolog

9.7e-06

42.86

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKR
        M +SCK +  +L  CL  SDC+ V+ ++ REC   K   +P EC  L E Y  CKR
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKR

Arabidopsis top hits

e value

%identity

Alignment

AT1G10865.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

1.4e-23

82.76

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        M+KSCKGLA ELVKCLSES CVK + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

AT1G10865.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

1.4e-23

82.76

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        M+KSCKGLA ELVKCLSES CVK + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

Sequences

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CDS sequence

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ATGGCCCTTTCTTTACTTCTTTCGTCTTCTTCTCCGTCGGGCGCTCACAGCAATCGGTCGTCGCTGTTGCCTTTCACCAGGGTAAAATTAAGGGGAAGGATGTCGAAGTC
TTGCAAAGGTTTGGCGATGGAATTGGTCAAGTGTCTCAGCGAATCTGATTGTGTAAAGGTTCAGAACCGAACTTACAGGGAATGTGCTGGAGAGAAGAGTCCTTGCATAC
CTAGTGAATGTGTGGGATTAAGAGAAACATATTTCAACTGTAAAAGAGGCCAGGCAAGTTTTCATTGA

mRNA sequence

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Protein sequence

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MALSLLLSSSSPSGAHSNRSSLLPFTRVKLRGRMSKSCKGLAMELVKCLSESDCVKVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQASFH

Clc05G29140 (gene) of Watermelon (cordophanus) v2 genome