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Clc05G29260 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G29260
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGlutamate receptor 2 plant
Genome locationClcChr05:36157506..36157881
RNA-Seq ExpressionClc05G29260
SyntenyClc05G29260
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF49536.1 glutamate receptor 2 plant, putative [Ricinus communis]4.2e-0652.11Show/hide
Query:  EFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI
        E + +  FPA  S G+KA+   AA+IPTGK R++ GGGGSGG +KG TT++ A  A T T TK K RTI +
Subjt:  EFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI

KAE8648868.1 hypothetical protein Csa_008159, partial [Cucumis sativus]1.0e-2081.08Show/hide
Query:  HTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAIFWQPEI
        H    P  TSEGEKARRRSAAMIPTGKKR+TSGGGG GGRT GRTTMETATAAR +TDTKLKQRTIA F Q EI
Subjt:  HTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAIFWQPEI

KAG5066285.1 hypothetical protein JHK86_010016 [Glycine max]5.5e-0666Show/hide
Query:  SAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI
        SAAMIPTGKKR TSGGGGSGG   G TT++ A+AART+T+ K KQR +++
Subjt:  SAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI

KAG6573795.1 hypothetical protein SDJN03_27682, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1978.38Show/hide
Query:  MLFEFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI
        M+  F  T  FP PTSEGEKAR  SAAMIPTGKKR+  GGGGSGGRT GRTTMETATAART+TDTKLKQRTI I
Subjt:  MLFEFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI

PON98760.1 hypothetical protein TorRG33x02_053750 [Trema orientale]1.6e-0554.24Show/hide
Query:  TSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIA
        + EGEKA   SAAMIPTGKK + +GGGG GG+  G+ T++ A AA T+T+ KL+ R I+
Subjt:  TSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIA

TrEMBL top hitse value%identityAlignment
A0A0A0KWY2 Glutamate receptor 2 plant1.9e-2085.51Show/hide
Query:  PAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAIFWQPEI
        P  TSEGEKARRRSAAMIPTGKKR+TSGGGG GGRT GRTTMETATAAR +TDTKLKQRTIA F Q EI
Subjt:  PAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAIFWQPEI

A0A2P5FLV3 Uncharacterized protein7.7e-0654.24Show/hide
Query:  TSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIA
        + EGEKA   SAAMIPTGKK + +GGGG GG+  G+ T++ A AA T+T+ KL+ R I+
Subjt:  TSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIA

A0A498JFA5 Uncharacterized protein2.5e-0452.46Show/hide
Query:  PAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTI
        PA    GEKAR + AA++PTGK ++ +GGGGSGG   GRTT   A  A T+ D KL   TI
Subjt:  PAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTI

A0A540KIX5 Uncharacterized protein6.5e-0556.14Show/hide
Query:  GEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI
        GEKAR   AA++PTGK ++ +GGGGSGG  KGRTTM  A  A T TD KL   T+ +
Subjt:  GEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI

B9RG81 Glutamate receptor 2 plant, putative2.0e-0652.11Show/hide
Query:  EFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI
        E + +  FPA  S G+KA+   AA+IPTGK R++ GGGGSGG +KG TT++ A  A T T TK K RTI +
Subjt:  EFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTCGAATTCCTTCATACAAAGACGTTCCCGGCGCCGACATCGGAGGGGGAAAAAGCGAGGAGAAGAAGCGCCGCCATGATTCCAACCGGAAAGAAGAGAAACAC
AAGCGGTGGCGGAGGCAGCGGCGGAAGAACCAAGGGCAGAACGACCATGGAAACCGCAACGGCGGCGAGGACGAAAACGGACACTAAGTTGAAGCAACGTACCATAGCAA
TTTTCTGGCAGCCGGAGATTGGATCATGTCCTTCAGCGGCGGGAATGCGTGTGAAAAGAATCCGGTGA
mRNA sequenceShow/hide mRNA sequence
AATGTTATTCGAATTCCTTCATACAAAGACGTTCCCGGCGCCGACATCGGAGGGGGAAAAAGCGAGGAGAAGAAGCGCCGCCATGATTCCAACCGGAAAGAAGAGAAACA
CAAGCGGTGGCGGAGGCAGCGGCGGAAGAACCAAGGGCAGAACGACCATGGAAACCGCAACGGCGGCGAGGACGAAAACGGACACTAAGTTGAAGCAACGTACCATAGCA
ATTTTCTGGCAGCCGGAGATTGGATCATGTCCTTCAGCGGCGGGAATGCGTGTGAAAAGAATCCGGTGACGACGGTGGCAATTTTGGATCGAAGTTGACGGAGGCGGAAA
AATTAGGGGTGGGGGTTTATATAGCTTTATTAAAACAACACAATAA
Protein sequenceShow/hide protein sequence
MLFEFLHTKTFPAPTSEGEKARRRSAAMIPTGKKRNTSGGGGSGGRTKGRTTMETATAARTKTDTKLKQRTIAIFWQPEIGSCPSAAGMRVKRIR