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Clc05G29265 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc05G29265
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-regulated gene involved in organ size
Genome locationClcChr05:36157524..36158479
RNA-Seq ExpressionClc05G29265
SyntenyClc05G29265
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5742459.1 putative transmembrane protein [Tripterygium wilfordii]3.0e-1473.85Show/hide
Query:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV
        MVRCF++ SV VLAAVA SMVVLPL+LPPLPPPPL+ LFFPVGIM AL+ LAFSP ++  GNV V
Subjt:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV

KAG2372512.1 uncharacterized protein HKW66_Vig0206190 [Vigna angularis]3.5e-1556.14Show/hide
Query:  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLL
        P  S S Q+ H    R H +  T +  + G    HD      I    K  MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+L
Subjt:  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLL

Query:  LAFSPSDVGAGNVF
        LAFSPSD G G V+
Subjt:  LAFSPSDVGAGNVF

KAG6601123.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2774.26Show/hide
Query:  IFPPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAG
        I PP    IQN  R HRIL     AA+GHD IS  +KIAMVRCFNLVS+FVLAAVAVSMVVL LVLPPLPPPP+V LFFPVG+MAALL+LAFSPSDVG  
Subjt:  IFPPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAG

Query:  N
        N
Subjt:  N

RZC16429.1 hypothetical protein D0Y65_009620 [Glycine soja]5.0e-1449.07Show/hide
Query:  LYKPPPLIFPPPSTSIQNCHRRHRILFTRI-----PAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALL
        ++  P  ++ P +  +    R+H ++  ++         G + +     I M RCF L SV VLAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+
Subjt:  LYKPPPLIFPPPSTSIQNCHRRHRILFTRI-----PAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALL

Query:  LLAFSPSD
        LL FSPSD
Subjt:  LLAFSPSD

XP_007148923.1 hypothetical protein PHAVU_005G025500g [Phaseolus vulgaris]3.0e-1479.69Show/hide
Query:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF
        MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G G V+
Subjt:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF

TrEMBL top hitse value%identityAlignment
A0A0L9UI81 Uncharacterized protein1.7e-1556.14Show/hide
Query:  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLL
        P  S S Q+ H    R H +  T +  + G    HD      I    K  MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+L
Subjt:  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLL

Query:  LAFSPSDVGAGNVF
        LAFSPSD G G V+
Subjt:  LAFSPSDVGAGNVF

A0A0S3SKI1 Uncharacterized protein1.7e-1556.14Show/hide
Query:  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLL
        P  S S Q+ H    R H +  T +  + G    HD      I    K  MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+L
Subjt:  PPPSTSIQNCH----RRHRILFTRIPAAEG----HD-----PISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLL

Query:  LAFSPSDVGAGNVF
        LAFSPSD G G V+
Subjt:  LAFSPSDVGAGNVF

A0A445KZX5 Uncharacterized protein2.4e-1449.07Show/hide
Query:  LYKPPPLIFPPPSTSIQNCHRRHRILFTRI-----PAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALL
        ++  P  ++ P +  +    R+H ++  ++         G + +     I M RCF L SV VLAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+
Subjt:  LYKPPPLIFPPPSTSIQNCHRRHRILFTRI-----PAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALL

Query:  LLAFSPSD
        LL FSPSD
Subjt:  LLAFSPSD

A0A7J7D881 Putative transmembrane protein1.4e-1473.85Show/hide
Query:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV
        MVRCF++ SV VLAAVA SMVVLPL+LPPLPPPPL+ LFFPVGIM AL+ LAFSP ++  GNV V
Subjt:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV

V7BSD6 Uncharacterized protein1.4e-1479.69Show/hide
Query:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF
        MVRCF+L SV +LAA+A SMVVLPL+LPPLPPPPLV LFFPVGIMAAL+LLAFSPSD G G V+
Subjt:  MVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVF

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.2e-0738.95Show/hide
Query:  PPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMV--RCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS
        PPP+ + +N     R  F+              QK  M+    F+L S+ +L  +  S+++LPLVLPPLPPPP + L  P+GIM  L++LAF PS
Subjt:  PPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMV--RCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.2e-0750.82Show/hide
Query:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV
        F+L S+F+L  +  S+++LPLVLPPLPPPP + L  P+GIM  L++LAF PS     N  V
Subjt:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.6e-0544.83Show/hide
Query:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGN
        F++ S+ +L  V  S+V+LPLVLPPLPPPP + +  PV ++  LL LAF P+   + +
Subjt:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGN

Q8RXL7 ARGOS-like protein4.7e-0753.85Show/hide
Query:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS
        F+L S+ VL  +  S+++LPL+LPPLPPPP + L  P+GIM  L++LAF PS
Subjt:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS

Arabidopsis top hitse value%identityAlignment
AT2G41230.1 unknown protein8.6e-0446.94Show/hide
Query:  SVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSD
        SV +L  +++ +++LP  LPPLPPPP   L  P+ +M  L+ LAFSPS+
Subjt:  SVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSD

AT2G44080.1 ARGOS-like3.4e-0853.85Show/hide
Query:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS
        F+L S+ VL  +  S+++LPL+LPPLPPPP + L  P+GIM  L++LAF PS
Subjt:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPS

AT3G59900.1 auxin-regulated gene involved in organ size8.9e-0950.82Show/hide
Query:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV
        F+L S+F+L  +  S+++LPLVLPPLPPPP + L  P+GIM  L++LAF PS     N  V
Subjt:  FNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGAGNVFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAAAGCTATATAAACCCCCACCCCTAATTTTTCCGCCTCCGTCAACTTCGATCCAAAATTGCCACCGTCGTCACCGGATTCTTTTCACACGCATTCCCGCCGC
TGAAGGACATGATCCAATCTCCGGCTGCCAGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTTTCGTCCTCGCCGCCGTTGCGGTTTCCATGGTCGTTCTGC
CCTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGTTTCTCTTCTTTCCGGTTGGAATCATGGCGGCGCTTCTTCTCCTCGCTTTTTCCCCCTCCGATGTCGGCGCC
GGGAACGTCTTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATAAAGCTATATAAACCCCCACCCCTAATTTTTCCGCCTCCGTCAACTTCGATCCAAAATTGCCACCGTCGTCACCGGATTCTTTTCACACGCATTCCCGCCGC
TGAAGGACATGATCCAATCTCCGGCTGCCAGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTTTCGTCCTCGCCGCCGTTGCGGTTTCCATGGTCGTTCTGC
CCTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGTTTCTCTTCTTTCCGGTTGGAATCATGGCGGCGCTTCTTCTCCTCGCTTTTTCCCCCTCCGATGTCGGCGCC
GGGAACGTCTTTGTATGA
Protein sequenceShow/hide protein sequence
MEIKLYKPPPLIFPPPSTSIQNCHRRHRILFTRIPAAEGHDPISGCQKIAMVRCFNLVSVFVLAAVAVSMVVLPLVLPPLPPPPLVFLFFPVGIMAALLLLAFSPSDVGA
GNVFV