; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G00210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G00210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTCP family transcription factor family protein
Genome locationClcChr06:199882..200910
RNA-Seq ExpressionClc06G00210
SyntenyClc06G00210
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008361 - regulation of cell size (biological process)
GO:0048364 - root development (biological process)
GO:1900056 - negative regulation of leaf senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040018.1 transcription factor TCP9 [Cucumis melo var. makuwa]2.1e-14889.32Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F  DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN      
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
         VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSR
        APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+R
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSR

KAG6574771.1 Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. sororia]3.4e-14383.87Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MADI KQ+LDD   SPPTHL IN+SDSS ++LL L PK+EHPD+D         Q++KFTA+I K+VSS+PPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA+KKRRKRPANSDYVDVNDA+SVSVSASNG VQA 
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
        TVAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV CSSTRPQ FSFP PAAPLINTTARPIST PSK  TSHIQ++ TNQSSSTS+SSASKS+SVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK
        APISSSTV T+GKTT QMLR+FSLEIYDKEE QFMSRSS +
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK

XP_004145050.1 transcription factor TCP9 [Cucumis sativus]1.9e-14688.3Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F  DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN      
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
         VAGS AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF  PAAPLINTTARPIS FPSK +TSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH
        APISSS    SGKTTTQMLRDFSLEIYDKEE QFMS SSSKH
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH

XP_008460149.1 PREDICTED: transcription factor TCP9 [Cucumis melo]4.5e-15189.47Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F  DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN      
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
         VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH
        APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+RSSSKH
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH

XP_038876433.1 transcription factor TCP9 [Benincasa hispida]7.4e-16292.69Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MADIQKQELDDDDDSP THLPIN SDSSR+DLL LPPKQEHPDS  SNLPPSG+QLL FT DIAK+VS+LPPKR STKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS QDSADPSAAKKRRKRPANSDYVDV+ ALSVSVSASNGV+QAG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
        TV GSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAP APLI+TTARPISTF SKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH
        APISSST  T+GKTTTQMLRDFSLEIY+KEE QFMSRSSSKH
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH

TrEMBL top hitse value%identityAlignment
A0A0A0KCU1 TCP domain-containing protein9.4e-14788.3Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F  DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN      
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
         VAGS AVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF  PAAPLINTTARPIS FPSK +TSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH
        APISSS    SGKTTTQMLRDFSLEIYDKEE QFMS SSSKH
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH

A0A1S3CBF3 transcription factor TCP92.2e-15189.47Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F  DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN      
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
         VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH
        APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+RSSSKH
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH

A0A5A7TAM9 Transcription factor TCP91.0e-14889.32Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQELDDDDDSPPTHL INDSDSSR+DLL L PKQEHP   DSNLP     LL F  DI K++SSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSA KKRRKRPANSDYVDVNDALSVS+SASN      
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAG

Query:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
         VAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSF APAAP+INTTARPIS FPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM
Subjt:  TVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVM

Query:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSR
        APISSS+V  SGKTTTQMLRDFSLEIYDKEE QFM+R
Subjt:  APISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSR

A0A6J1H4Z3 transcription factor TCP9-like2.0e-14182.42Show/hide
Query:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR
        MADI KQ+LDD   SPPTHL IN+SDSS ++LL L PK+EHPD+D         Q++KFTA+I K+VSS+PPKRPSTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSV------SASN
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA+KKRRKRPANSDYVDVNDA+SVSV      SASN
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSV------SASN

Query:  GVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSAS
        G VQA TVAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV CSSTRPQ FSFP PAAPLINTTARPIST PSK  TSHIQ++ TNQSSSTS+SSAS
Subjt:  GVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSAS

Query:  KSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK
        KS+SVMAPISSSTV T+GKTT QMLR+FSLEIYDKEE QFMSRSS +
Subjt:  KSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK

A0A6J1L1L3 transcription factor TCP9-like2.7e-14181.82Show/hide
Query:  MADIQKQELDDDDD-----SPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPA
        MADI KQELDDD+D     SPPTHL IN+SDSS ++LL L PK+EHPD+D         Q+LKFTA+I K+VSS+PPKRPSTKDRHTKVEGRGRRIRIPA
Subjt:  MADIQKQELDDDDD-----SPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPA

Query:  TCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSAS--
        TCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTTSSSNQDS D SA+KKRRKRP NSDYVDVNDA+SVSVS S  
Subjt:  TCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSAS--

Query:  ----NGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTS
            NG VQA TVAGSPAVQQ FPPGFVPVWAIPSNAIIPGAVFMVPSV CSSTRPQ FSFP PAAPLINTTARPIST PSK  TSHIQ++ TNQSSSTS
Subjt:  ----NGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTS

Query:  SSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK
        +SSASKS+SVMAPISSSTVPT+ KTT QMLR+FSLEIYDKEE QFMSRSS +
Subjt:  SSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSK

SwissProt top hitse value%identityAlignment
A2YXQ1 Transcription factor PCF27.4e-3242.25Show/hide
Query:  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP
        PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIAATGTGT+PAIA +V+G L+IPT +SSS+  ++      + 
Subjt:  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP

Query:  SAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGS------------PAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV
        S+AK+RRK          +   + + +A   V+    + GS            P      P G VPV+A+P+         N +IP   AV+MVP     
Subjt:  SAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGS------------PAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV

Query:  ACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS
        A +  +P  F     A  L+N      + FP+  + +  Q     Q  ST+    S S
Subjt:  ACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS

O64647 Transcription factor TCP92.4e-6755.18Show/hide
Query:  FTADIAKSVSSLPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS
        F+  +A   S+ PP KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++ 
Subjt:  FTADIAKSVSSLPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS

Query:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVS-----VSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQLFSF
        +      +  KK+RKRP+NS+Y+D++DA+S S     ++ +  +     +A S   QQ  P G  P+WAIPSNA+IP  GA F++P +A  S +PQL +F
Subjt:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVS-----VSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQLFSF

Query:  PAPAAPLINTTA--RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGK-----TTTQMLRDFSLEIYDKEE-RQFMSRSSSK
        PA AA   +  A  +  ST    P    + SS     S  S S+ S++ SVMAP SSS V T        TTT  LRDFSLEIY+K+E  QFMS ++++
Subjt:  PAPAAPLINTTA--RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGK-----TTTQMLRDFSLEIYDKEE-RQFMSRSSSK

Q6ZBH6 Transcription factor PCF27.4e-3242.25Show/hide
Query:  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP
        PP  P  +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIAATGTGT+PAIA +V+G L+IPT +SSS+  ++      + 
Subjt:  PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSA------DP

Query:  SAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGS------------PAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV
        S+AK+RRK          +   + + +A   V+    + GS            P      P G VPV+A+P+         N +IP   AV+MVP     
Subjt:  SAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGS------------PAVQQAFPPGFVPVWAIPS---------NAIIP--GAVFMVP---SV

Query:  ACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS
        A +  +P  F     A  L+N      + FP+  + +  Q     Q  ST+    S S
Subjt:  ACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKS

Q9C9L2 Transcription factor TCP151.0e-2842.92Show/hide
Query:  PDSDDSNLPPSGIQLL-KFTADIAKSVSSL-------------PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA
        PD D ++ P   +QLL   T+  + S++ +             PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA
Subjt:  PDSDDSNLPPSGIQLL-KFTADIAKSVSSL-------------PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA

Query:  IIAATGTGTIPAIAMSVNGTLK----------IPTTTSS----SNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFP
        +IAATGTGTIPA   S+N +L+          + TT SS    S   S       + + RP N  +   + +  +      G     + AGS    Q+  
Subjt:  IIAATGTGTIPAIAMSVNGTLK----------IPTTTSS----SNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFP

Query:  PGFVPVWAIPSN
        P   P W+   N
Subjt:  PGFVPVWAIPSN

Q9LT89 Transcription factor TCP194.6e-5046.51Show/hide
Query:  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM
        SD +     G+ L+K      + V + P PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+
Subjt:  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM

Query:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
        SVNGTLKIPT++   N      D    KKRRKR   SD+VDVND+   SV++    + A     +  +      GFVP W +       G  F+      
Subjt:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC

Query:  SSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS
             Q+++ P  A AP +N  ARP+S++                      S+AS +++ M         TSG  TTQ LRDFSLEIYDK E QF+  S 
Subjt:  SSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS

Query:  S
        +
Subjt:  S

Arabidopsis top hitse value%identityAlignment
AT1G69690.1 TCP family transcription factor7.1e-3042.92Show/hide
Query:  PDSDDSNLPPSGIQLL-KFTADIAKSVSSL-------------PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA
        PD D ++ P   +QLL   T+  + S++ +             PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA
Subjt:  PDSDDSNLPPSGIQLL-KFTADIAKSVSSL-------------PPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA

Query:  IIAATGTGTIPAIAMSVNGTLK----------IPTTTSS----SNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFP
        +IAATGTGTIPA   S+N +L+          + TT SS    S   S       + + RP N  +   + +  +      G     + AGS    Q+  
Subjt:  IIAATGTGTIPAIAMSVNGTLK----------IPTTTSS----SNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFP

Query:  PGFVPVWAIPSN
        P   P W+   N
Subjt:  PGFVPVWAIPSN

AT2G45680.1 TCP family transcription factor1.7e-6855.18Show/hide
Query:  FTADIAKSVSSLPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS
        F+  +A   S+ PP KR STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++ 
Subjt:  FTADIAKSVSSLPP-KRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS

Query:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVS-----VSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQLFSF
        +      +  KK+RKRP+NS+Y+D++DA+S S     ++ +  +     +A S   QQ  P G  P+WAIPSNA+IP  GA F++P +A  S +PQL +F
Subjt:  NQDSADPSAAKKRRKRPANSDYVDVNDALSVS-----VSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIP--GAVFMVPSVACSSTRPQLFSF

Query:  PAPAAPLINTTA--RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGK-----TTTQMLRDFSLEIYDKEE-RQFMSRSSSK
        PA AA   +  A  +  ST    P    + SS     S  S S+ S++ SVMAP SSS V T        TTT  LRDFSLEIY+K+E  QFMS ++++
Subjt:  PAPAAPLINTTA--RPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGK-----TTTQMLRDFSLEIYDKEE-RQFMSRSSSK

AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 203.5e-2976.25Show/hide
Query:  AKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMS
        +++ + L PKR S KDRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETI+WLL++AEP+IIAATG+GTIPA A++
Subjt:  AKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMS

AT5G51910.1 TCP family transcription factor3.3e-5146.51Show/hide
Query:  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM
        SD +     G+ L+K      + V + P PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+
Subjt:  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM

Query:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
        SVNGTLKIPT++   N      D    KKRRKR   SD+VDVND+   SV++    + A     +  +      GFVP W +       G  F+      
Subjt:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC

Query:  SSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS
             Q+++ P  A AP +N  ARP+S++                      S+AS +++ M         TSG  TTQ LRDFSLEIYDK E QF+  S 
Subjt:  SSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS

Query:  S
        +
Subjt:  S

AT5G51910.2 TCP family transcription factor3.3e-5146.51Show/hide
Query:  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM
        SD +     G+ L+K      + V + P PKRP++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+
Subjt:  SDDSNLPPSGIQLLKFTADIAKSVSSLP-PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAM

Query:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC
        SVNGTLKIPT++   N      D    KKRRKR   SD+VDVND+   SV++    + A     +  +      GFVP W +       G  F+      
Subjt:  SVNGTLKIPTTTSSSNQD--SADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVAC

Query:  SSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS
             Q+++ P  A AP +N  ARP+S++                      S+AS +++ M         TSG  TTQ LRDFSLEIYDK E QF+  S 
Subjt:  SSTRPQLFSFPAPA-APLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSS

Query:  S
        +
Subjt:  S


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGACTCCTCTCGAATCGACCTTCTTTCCCTTCCTCC
TAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGA
GACCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCAC
AAGTCCGACGGCGAAACTATTCGGTGGCTTCTCGAGCGGGCCGAGCCGGCTATCATCGCCGCAACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCAC
TCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACG
ACGCCCTCTCCGTCTCCGTCTCCGCCTCGAATGGCGTCGTTCAGGCCGGTACCGTTGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGG
GCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCT
CATCAACACGACGGCGCGGCCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTT
CCAAGTCTCAATCTGTGATGGCGCCGATCTCGAGCTCTACCGTTCCAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAA
GAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGACTCCTCTCGAATCGACCTTCTTTCCCTTCCTCC
TAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGA
GACCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCAC
AAGTCCGACGGCGAAACTATTCGGTGGCTTCTCGAGCGGGCCGAGCCGGCTATCATCGCCGCAACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCAC
TCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACG
ACGCCCTCTCCGTCTCCGTCTCCGCCTCGAATGGCGTCGTTCAGGCCGGTACCGTTGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGG
GCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCT
CATCAACACGACGGCGCGGCCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTT
CCAAGTCTCAATCTGTGATGGCGCCGATCTCGAGCTCTACCGTTCCAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAA
GAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA
Protein sequenceShow/hide protein sequence
MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGH
KSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVW
AIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKE
ERQFMSRSSSKH