; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G00390 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G00390
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCalcium-binding EF-hand
Genome locationClcChr06:350722..351646
RNA-Seq ExpressionClc06G00390
SyntenyClc06G00390
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO78596.1 Calcium-binding EF-hand [Corchorus capsularis]2.1e-2044.59Show/hide
Query:  NHFELLFNLLDSNGDGKISTKELRRKWIP--------------------------TVMDEFLEVLREEE------------EEVVLREAFLIFDGDKNGL
        N F  +F ++D+NGDGKIS  EL    +                             +DEF+ V+  +E            EE  L +AFLIFD DKNGL
Subjt:  NHFELLFNLLDSNGDGKISTKELRRKWIP--------------------------TVMDEFLEVLREEE------------EEVVLREAFLIFDGDKNGL

Query:  ICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT
        I A+ELR+ L  LG+TKC L+ECKRMI GVDKDGDGFV+F++FR MMT
Subjt:  ICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT

TXG62712.1 hypothetical protein EZV62_009706 [Acer yangbiense]5.5e-2144.03Show/hide
Query:  FKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRR------------------KWIPTVM----------DEFLEVL------REEEEEVVLRE
        F   +NN    +    N F+ +F ++DSNGDGKIST E+                    + + T M          DEF++ +      +EE+ +  L +
Subjt:  FKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRR------------------KWIPTVM----------DEFLEVL------REEEEEVVLRE

Query:  AFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMM
        AFLIFD DKNGLI A+ELRR L  LG +KC L ECKRMI GVDKDGDGFV+FQ+FR MM
Subjt:  AFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMM

XP_004153117.1 calmodulin-beta [Cucumis sativus]6.5e-5469.66Show/hide
Query:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF
        MFNLTSS F TFFHRN I+SKPFF+KSLNNQKLPSFTTFNHF+LLFNLLDS+GDGKISTKEL         +K   T+                  MDEF
Subjt:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF

Query:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK
        LEVL++ EEEE +LREAFLIFDGDKNGLICAE+L+RTLSK GW KC LK+CK+MI GVD DGDG+VNFQDFRLMMTQK
Subjt:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK

XP_008460131.1 PREDICTED: calmodulin-like protein 7 [Cucumis melo]4.9e-5469.66Show/hide
Query:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF
        M NLTSS F+TFFHRN ITSKPFF+KSLNNQKLPSFTTFNHF+LLFN+LDS GDGKISTKEL         +K   T+                  MDEF
Subjt:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF

Query:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK
        LEVL++ EEEE +LREAFLIFDGDKNGLICAEEL+RT  K GWTKC LK+CK+MI GVD DGDGFVNFQDFRLMMTQK
Subjt:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK

XP_012083557.1 probable calcium-binding protein CML27 [Jatropha curcas]3.5e-2343.58Show/hide
Query:  SFTT---FFHRNIITSKPFFKKSLNNQKL-----PSFTTF---NHFELLFNLLDSNGDGKIST-------------------------KELRRKWIPTV-
        SFTT      R +I      K++L++        PSF +    N F+ +FNL+D+NGDGKIS+                         KEL R     V 
Subjt:  SFTT---FFHRNIITSKPFFKKSLNNQKL-----PSFTTF---NHFELLFNLLDSNGDGKIST-------------------------KELRRKWIPTV-

Query:  MDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT
         DEF  +L   +EE  L +AF+IFD DKNGLI A+EL++ LS+LG+ KC LKEC+ MI GVDKDGDGFV+F++FR MMT
Subjt:  MDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT

TrEMBL top hitse value%identityAlignment
A0A067JXS4 Uncharacterized protein1.7e-2343.58Show/hide
Query:  SFTT---FFHRNIITSKPFFKKSLNNQKL-----PSFTTF---NHFELLFNLLDSNGDGKIST-------------------------KELRRKWIPTV-
        SFTT      R +I      K++L++        PSF +    N F+ +FNL+D+NGDGKIS+                         KEL R     V 
Subjt:  SFTT---FFHRNIITSKPFFKKSLNNQKL-----PSFTTF---NHFELLFNLLDSNGDGKIST-------------------------KELRRKWIPTV-

Query:  MDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT
         DEF  +L   +EE  L +AF+IFD DKNGLI A+EL++ LS+LG+ KC LKEC+ MI GVDKDGDGFV+F++FR MMT
Subjt:  MDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT

A0A0A0K8Z4 Uncharacterized protein3.1e-5469.66Show/hide
Query:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF
        MFNLTSS F TFFHRN I+SKPFF+KSLNNQKLPSFTTFNHF+LLFNLLDS+GDGKISTKEL         +K   T+                  MDEF
Subjt:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF

Query:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK
        LEVL++ EEEE +LREAFLIFDGDKNGLICAE+L+RTLSK GW KC LK+CK+MI GVD DGDG+VNFQDFRLMMTQK
Subjt:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK

A0A1R3I7M2 Calcium-binding EF-hand1.0e-2044.59Show/hide
Query:  NHFELLFNLLDSNGDGKISTKELRRKWIP--------------------------TVMDEFLEVLREEE------------EEVVLREAFLIFDGDKNGL
        N F  +F ++D+NGDGKIS  EL    +                             +DEF+ V+  +E            EE  L +AFLIFD DKNGL
Subjt:  NHFELLFNLLDSNGDGKISTKELRRKWIP--------------------------TVMDEFLEVLREEE------------EEVVLREAFLIFDGDKNGL

Query:  ICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT
        I A+ELR+ L  LG+TKC L+ECKRMI GVDKDGDGFV+F++FR MMT
Subjt:  ICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT

A0A1S3CBX8 calmodulin-like protein 72.4e-5469.66Show/hide
Query:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF
        M NLTSS F+TFFHRN ITSKPFF+KSLNNQKLPSFTTFNHF+LLFN+LDS GDGKISTKEL         +K   T+                  MDEF
Subjt:  MFNLTSS-FTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELR--------RKWIPTV------------------MDEF

Query:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK
        LEVL++ EEEE +LREAFLIFDGDKNGLICAEEL+RT  K GWTKC LK+CK+MI GVD DGDGFVNFQDFRLMMTQK
Subjt:  LEVLRE-EEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMTQK

A0A5C7I2Q7 Uncharacterized protein2.7e-2144.03Show/hide
Query:  FKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRR------------------KWIPTVM----------DEFLEVL------REEEEEVVLRE
        F   +NN    +    N F+ +F ++DSNGDGKIST E+                    + + T M          DEF++ +      +EE+ +  L +
Subjt:  FKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRR------------------KWIPTVM----------DEFLEVL------REEEEEVVLRE

Query:  AFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMM
        AFLIFD DKNGLI A+ELRR L  LG +KC L ECKRMI GVDKDGDGFV+FQ+FR MM
Subjt:  AFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMM

SwissProt top hitse value%identityAlignment
Q9C9U8 Probable calcium-binding protein CML265.6e-1637.16Show/hide
Query:  KSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL-----------RRKWIPTVMD-------------EFLEVLREEEEEVVLREAFLIFDGDKNGL
        +S N    PS  T    + +F+  D+NGDGKIS  EL             + +  V+D             EF  + R     V +REAF ++D +KNGL
Subjt:  KSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL-----------RRKWIPTVMD-------------EFLEVLREEEEEVVLREAFLIFDGDKNGL

Query:  ICAEELRRTLSKLGWTKCGLKECKRMIG-VDKDGDGFVNFQDFRLMMT
        I + E+ + L++LG T C +++C RMIG VD DGDG VNF++F+ MM+
Subjt:  ICAEELRRTLSKLGWTKCGLKECKRMIG-VDKDGDGFVNFQDFRLMMT

Q9FYK2 Probable calcium-binding protein CML251.4e-1435.26Show/hide
Query:  PFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL---------------RRKWIPTV---------MDEFLEVLRE--EEEEVV--LREAFLI
        P+ +K+ + +     T     E +F   D NGDGKIS+KEL                 K I  +          +EF+E+  +  ++ +V+  L++AF +
Subjt:  PFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL---------------RRKWIPTV---------MDEFLEVLRE--EEEEVV--LREAFLI

Query:  FDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT
        +D D NG I AEEL   L  LG  +C + EC++MI GVDKDGDG ++F++F++MMT
Subjt:  FDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT

Q9LE22 Probable calcium-binding protein CML271.2e-1540.46Show/hide
Query:  LFNLLDSNGDGKISTKEL--------------------------RRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTK
        +F+  DSNGDGKIS  EL                          R  +I   +DEF  + R       +R+AF ++D DKNGLI A EL + L++LG + 
Subjt:  LFNLLDSNGDGKISTKEL--------------------------RRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTK

Query:  CGLKECKRMIG-VDKDGDGFVNFQDFRLMMT
        C +++C RMIG VD DGDG VNF++F+ MMT
Subjt:  CGLKECKRMIG-VDKDGDGFVNFQDFRLMMT

Q9SRR7 Calmodulin-like protein 32.6e-1347.06Show/hide
Query:  LDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCG--LKECKRMIG-VDKDGDGFVNFQDFRL
        +D NGDG +  +E    +  T+M+E     R+EEE+  +REAF +FD +++G I  EELR  L+ LG  K G  L++CKRMI  VD DGDG VNF++F+ 
Subjt:  LDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCG--LKECKRMIG-VDKDGDGFVNFQDFRL

Query:  MM
        MM
Subjt:  MM

Q9SS31 Probable calcium-binding protein CML361.5e-1339.02Show/hide
Query:  KSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECK
        +SL ++  P   T     ++   +D +GDG I  +EL  + +       L+  R+  E   L+E F  FD D++GLI A+EL R  S +G  +C L +CK
Subjt:  KSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCGLKECK

Query:  RMIG-VDKDGDGFVNFQDFRLMM
        RMI  VD+DGDGFV F +F  MM
Subjt:  RMIG-VDKDGDGFVNFQDFRLMM

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein8.8e-1740.46Show/hide
Query:  LFNLLDSNGDGKISTKEL--------------------------RRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTK
        +F+  DSNGDGKIS  EL                          R  +I   +DEF  + R       +R+AF ++D DKNGLI A EL + L++LG + 
Subjt:  LFNLLDSNGDGKISTKEL--------------------------RRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTK

Query:  CGLKECKRMIG-VDKDGDGFVNFQDFRLMMT
        C +++C RMIG VD DGDG VNF++F+ MMT
Subjt:  CGLKECKRMIG-VDKDGDGFVNFQDFRLMMT

AT1G18210.2 Calcium-binding EF-hand family protein8.8e-1740.46Show/hide
Query:  LFNLLDSNGDGKISTKEL--------------------------RRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTK
        +F+  DSNGDGKIS  EL                          R  +I   +DEF  + R       +R+AF ++D DKNGLI A EL + L++LG + 
Subjt:  LFNLLDSNGDGKISTKEL--------------------------RRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTK

Query:  CGLKECKRMIG-VDKDGDGFVNFQDFRLMMT
        C +++C RMIG VD DGDG VNF++F+ MMT
Subjt:  CGLKECKRMIG-VDKDGDGFVNFQDFRLMMT

AT1G24620.1 EF hand calcium-binding protein family9.7e-1635.26Show/hide
Query:  PFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL---------------RRKWIPTV---------MDEFLEVLRE--EEEEVV--LREAFLI
        P+ +K+ + +     T     E +F   D NGDGKIS+KEL                 K I  +          +EF+E+  +  ++ +V+  L++AF +
Subjt:  PFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL---------------RRKWIPTV---------MDEFLEVLRE--EEEEVV--LREAFLI

Query:  FDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT
        +D D NG I AEEL   L  LG  +C + EC++MI GVDKDGDG ++F++F++MMT
Subjt:  FDGDKNGLICAEELRRTLSKLGWTKCGLKECKRMI-GVDKDGDGFVNFQDFRLMMT

AT1G73630.1 EF hand calcium-binding protein family3.9e-1737.16Show/hide
Query:  KSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL-----------RRKWIPTVMD-------------EFLEVLREEEEEVVLREAFLIFDGDKNGL
        +S N    PS  T    + +F+  D+NGDGKIS  EL             + +  V+D             EF  + R     V +REAF ++D +KNGL
Subjt:  KSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKEL-----------RRKWIPTVMD-------------EFLEVLREEEEEVVLREAFLIFDGDKNGL

Query:  ICAEELRRTLSKLGWTKCGLKECKRMIG-VDKDGDGFVNFQDFRLMMT
        I + E+ + L++LG T C +++C RMIG VD DGDG VNF++F+ MM+
Subjt:  ICAEELRRTLSKLGWTKCGLKECKRMIG-VDKDGDGFVNFQDFRLMMT

AT3G07490.1 ARF-GAP domain 111.8e-1447.06Show/hide
Query:  LDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCG--LKECKRMIG-VDKDGDGFVNFQDFRL
        +D NGDG +  +E    +  T+M+E     R+EEE+  +REAF +FD +++G I  EELR  L+ LG  K G  L++CKRMI  VD DGDG VNF++F+ 
Subjt:  LDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTLSKLGWTKCG--LKECKRMIG-VDKDGDGFVNFQDFRL

Query:  MM
        MM
Subjt:  MM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATCTCACATCTTCCTTCACTACCTTCTTCCATAGGAACATTATTACCTCAAAACCCTTCTTCAAGAAATCCCTAAACAACCAAAAGCTACCTTCTTTCACCAC
TTTTAACCACTTTGAGCTCCTCTTCAACCTCCTTGACTCCAATGGTGATGGAAAGATCTCCACGAAAGAGCTCCGTCGGAAATGGATTCCGACCGTGATGGATGAATTTT
TAGAGGTTTTGAGGGAGGAGGAAGAAGAAGTAGTTCTTAGGGAAGCTTTTTTGATATTTGATGGTGACAAGAATGGATTGATTTGTGCTGAGGAACTAAGGAGAACATTG
AGCAAACTTGGATGGACAAAATGTGGGCTCAAAGAATGTAAAAGGATGATTGGAGTGGATAAAGATGGCGATGGGTTTGTGAATTTTCAAGATTTTCGGCTGATGATGAC
ACAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATCTCACATCTTCCTTCACTACCTTCTTCCATAGGAACATTATTACCTCAAAACCCTTCTTCAAGAAATCCCTAAACAACCAAAAGCTACCTTCTTTCACCAC
TTTTAACCACTTTGAGCTCCTCTTCAACCTCCTTGACTCCAATGGTGATGGAAAGATCTCCACGAAAGAGCTCCGTCGGAAATGGATTCCGACCGTGATGGATGAATTTT
TAGAGGTTTTGAGGGAGGAGGAAGAAGAAGTAGTTCTTAGGGAAGCTTTTTTGATATTTGATGGTGACAAGAATGGATTGATTTGTGCTGAGGAACTAAGGAGAACATTG
AGCAAACTTGGATGGACAAAATGTGGGCTCAAAGAATGTAAAAGGATGATTGGAGTGGATAAAGATGGCGATGGGTTTGTGAATTTTCAAGATTTTCGGCTGATGATGAC
ACAAAAATGA
Protein sequenceShow/hide protein sequence
MFNLTSSFTTFFHRNIITSKPFFKKSLNNQKLPSFTTFNHFELLFNLLDSNGDGKISTKELRRKWIPTVMDEFLEVLREEEEEVVLREAFLIFDGDKNGLICAEELRRTL
SKLGWTKCGLKECKRMIGVDKDGDGFVNFQDFRLMMTQK