; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G00600 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G00600
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description50S ribosomal protein L3
Genome locationClcChr06:532038..534160
RNA-Seq ExpressionClc06G00600
SyntenyClc06G00600
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000597 - Ribosomal protein L3
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR019927 - Ribosomal protein L3, bacterial/organelle-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039986.1 50S ribosomal protein L3 [Cucumis melo var. makuwa]2.3e-14184.66Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  F TRRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQVKTEATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

KAG6574805.1 50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.7e-14284.36Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MS+IS SSASTS+R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NNLR QFP  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQ+KTEATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

XP_008460096.1 PREDICTED: 50S ribosomal protein L3, chloroplastic [Cucumis melo]2.8e-14284.97Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  FPTRRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQVKTEATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

XP_023006396.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]1.4e-14184.05Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MS+IS SSASTS R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NN+R QFP  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQ+KTEATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

XP_038876222.1 50S ribosomal protein L3, chloroplastic [Benincasa hispida]6.6e-14485.89Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MSIISFSSASTS+R+PIF NNASSSSSFSSTSSSLTLRTSFLALP+     NNLRLQFPTRRTTRRPN+ LSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQVKTEATDGYS+VQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESV GFE NQ LVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

TrEMBL top hitse value%identityAlignment
A0A0A0K9U5 Uncharacterized protein3.7e-14083.74Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MSIISFSSAS S+++PIFTNN SSSS  SS+SSSLTLRTSFLALPLKS   NNLR  FPTR TTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQVKT+ATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVD FEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVG+NIPK+
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

A0A1S3CBR5 50S ribosomal protein L3, chloroplastic1.3e-14284.97Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  FPTRRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQVKTEATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

A0A5A7TD05 50S ribosomal protein L31.1e-14184.66Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MSIISFSSAS S+++PIFTNN SSS   SS+SSSLTLRTSFLALPLKS   NNLR  F TRRTTRRP+DGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQVKTEATDGYS+VQVGYRRVRDRKLTKPELGHL+KAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKIDEDLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1H630 50S ribosomal protein L3, chloroplastic-like1.1e-14184.05Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MS+IS S ASTS+R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NNLR QFP  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQ+KTEATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1KXN5 50S ribosomal protein L3, chloroplastic-like6.7e-14284.05Show/hide
Query:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
        MS+IS SSASTS R+PIFTNNASS    SS SSSL LRTSFLALPLKS R+NN+R QFP  RTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV
Subjt:  MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKV

Query:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
        VPVTVVGFKEGNIVTQ+KTEATDGYS+VQVGYRRVRDRKLTKPE+GHLQKAGAIPMRHLQEFRLES+DGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ
Subjt:  VPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQ

Query:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK
                                      GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+DLNVVMIK
Subjt:  GSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIK

Query:  GAVPGKPGNLLRIAPAKIVGKNIPKN
        GAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GAVPGKPGNLLRIAPAKIVGKNIPKN

SwissProt top hitse value%identityAlignment
B0C1D3 50S ribosomal protein L34.7e-6049.79Show/hide
Query:  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFN
        +G++ TKLGM   F+  G+ +PVTVV  + G   VTQ+KT  TDGY+++Q+GY    ++ LT+PELGHL+K+G+ P+RHLQE+RL  V  +E  Q  +  
Subjt:  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFN

Query:  ELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK
        +LF EG LVD+SGT+IG+GF G                                KRHNF+RGPM HGSK+HRA GS GAGTTPGR+Y GK+M G+MG  K
Subjt:  ELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK

Query:  RKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKN
        + IRKL +V++D + NV++IKG+VPGKPG LL I PA IVG++
Subjt:  RKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKN

B1XJT9 50S ribosomal protein L33.3e-6151.85Show/hide
Query:  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVF
        +G++ TKLGM   F+ + G  +PVTVV  + G   VTQ+KT  TDGY+SVQ+GY  V+++ LTKP+LGHL+KA A P+RHL+E+RL+ V G+E  Q +  
Subjt:  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVF

Query:  NELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT
        N +F+ G +VDVSG TIG+GF G                                KRHNFKRG MTHGSK+HR  GS GAGTTPGRVY GK+M GR GGT
Subjt:  NELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT

Query:  KRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGK
        K  +RKL +V++DE+ N+++IKGA+PGK GNLL IAP+ IVG+
Subjt:  KRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGK

O80360 50S ribosomal protein L3, chloroplastic (Fragment)1.1e-10468.58Show/hide
Query:  SSSLTLRTSFL-ALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQV
        ++ LTLR+ FL  LPL++ +         T + T       S+  S+EAG+GVMATKLGMMSFFE  G VVPVTVVGF+EGNIVTQ+KTEATDGY++VQV
Subjt:  SSSLTLRTSFL-ALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQV

Query:  GYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCH
        GYRRVRDRKLTKPE+GHL+K+G IP+RHLQEFRL+S+DGFE  Q+L F ELFKEGDLVDVSGTTIGKGFQ                              
Subjt:  GYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCH

Query:  GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        GGIKRHNFKRG MTHGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL+IVKID+ LN++MIKGA+PGKPGNLLRIAPAKIVGKNIPK+
Subjt:  GGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

P82191 50S ribosomal protein L3, chloroplastic1.1e-10164.76Show/hide
Query:  SFSSASTSSRYPIFTNNASSSSSFSSTSS--------SLTLRTSFLALPLKSRRSNNLRLQFPTRRT-TRRPNDGLSV-CMSMEAGIGVMATKLGMMSFF
        +FS  S+S  Y     + SS  + S +SS        SL L TSF+  P    +   L+   P+R T  RR   GL +  MS++AGIGVM TKLGMMSFF
Subjt:  SFSSASTSSRYPIFTNNASSSSSFSSTSS--------SLTLRTSFLALPLKSRRSNNLRLQFPTRRT-TRRPNDGLSV-CMSMEAGIGVMATKLGMMSFF

Query:  EPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTT
        E DG VVPVTV+GFKEGNIVTQVKTE+TDGY++VQVGY R+RDRKLT PE GHL KAG IPMRHLQEFRL SVD F P+Q+L+F ELFKEGD+VD+SGTT
Subjt:  EPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTT

Query:  IGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDL
        IGKGFQ                              GGIKRHNFKRG MTHGSKSHRALGSIGAGTTPG VYKGKKMPGRMGGTK KIRKL+I+KID DL
Subjt:  IGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDL

Query:  NVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
         VVMIKGAVPGKPGNLLR+APAKIVGKNIPKN
Subjt:  NVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Q9SKX4 50S ribosomal protein L3-1, chloroplastic2.9e-10266.33Show/hide
Query:  SFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYS
        SF S  +  TL +S         +S++L ++         P     V  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY 
Subjt:  SFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYS

Query:  SVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIV
        +VQ+GYRRVRD+KLTKPE GHLQKAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGDLVDV+GTTIGKGFQ                          
Subjt:  SVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIV

Query:  IPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
            GGIKRH+FKRG MTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+ KIRKL+IVK+D++LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Subjt:  IPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Arabidopsis top hitse value%identityAlignment
AT2G43030.1 Ribosomal protein L3 family protein2.1e-10366.33Show/hide
Query:  SFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYS
        SF S  +  TL +S         +S++L ++         P     V  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY 
Subjt:  SFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYS

Query:  SVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIV
        +VQ+GYRRVRD+KLTKPE GHLQKAG IPMRHLQEFRL +++GFEPNQ+LVF+E+FKEGDLVDV+GTTIGKGFQ                          
Subjt:  SVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIV

Query:  IPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
            GGIKRH+FKRG MTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+ KIRKL+IVK+D++LNVVMIKGA+PGKPGNLLRI PAKIVG NIPKN
Subjt:  IPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

AT3G17465.1 ribosomal protein L3 plastid5.8e-2933.9Show/hide
Query:  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL
        G++A K GM + ++  GK +P++++ + + NIV+QVKT   +G  ++Q+G  + + + L+K  +GH +  G    R L+EF + + D   P    +    
Subjt:  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNEL

Query:  FKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKR
        F  G  VDV+G T GKGFQG                               +KRH F   P +HG S SHR+ GS G    PG+V+KG+KM GRMG  +R
Subjt:  FKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSLQNTFIVIPCHGGIKRHNFKRGPMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKR

Query:  KIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPA
         ++ + + KID   N++ ++G VPG  GN + I  A
Subjt:  KIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCATATCATTTTCATCAGCTTCAACCTCATCCAGATATCCAATTTTCACCAACAATGCTTCTTCTTCTTCTTCATTTTCCTCCACTTCTTCATCTCTGACACT
CAGGACATCTTTCCTCGCCCTTCCTCTGAAATCCCGCCGCAGCAACAACCTTCGTCTCCAATTTCCGACACGAAGAACCACTAGACGTCCTAACGACGGCCTCTCCGTTT
GTATGAGCATGGAGGCCGGCATTGGCGTCATGGCCACCAAGCTCGGTATGATGAGCTTCTTCGAGCCCGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAA
GGCAACATCGTCACGCAGGTTAAGACGGAGGCGACTGACGGCTATAGTTCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTGGGGCA
TCTCCAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGTCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTAGTTTTCAATGAACTTTTCAAGG
AGGGCGACCTGGTTGATGTCTCGGGCACTACAATTGGAAAGGGATTTCAAGGTTCTTATTTATGTGTGTGGATAAGGATGTGTCTGTGCTATCTTGGCAAGCTTTCATTG
CAAAACACATTCATTGTCATCCCTTGTCATGGTGGAATCAAGAGGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCCAAGAGTCACAGAGCACTTGGATCAATCGG
TGCAGGAACTACACCGGGGCGTGTTTACAAGGGGAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAAATCAGAAAACTTAGGATTGTAAAGATTGACGAGGACC
TTAATGTTGTGATGATCAAAGGCGCCGTCCCAGGTAAGCCAGGAAACCTCCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTATCATATCATTTTCATCAGCTTCAACCTCATCCAGATATCCAATTTTCACCAACAATGCTTCTTCTTCTTCTTCATTTTCCTCCACTTCTTCATCTCTGACACT
CAGGACATCTTTCCTCGCCCTTCCTCTGAAATCCCGCCGCAGCAACAACCTTCGTCTCCAATTTCCGACACGAAGAACCACTAGACGTCCTAACGACGGCCTCTCCGTTT
GTATGAGCATGGAGGCCGGCATTGGCGTCATGGCCACCAAGCTCGGTATGATGAGCTTCTTCGAGCCCGACGGCAAGGTCGTCCCTGTCACGGTGGTTGGTTTCAAGGAA
GGCAACATCGTCACGCAGGTTAAGACGGAGGCGACTGACGGCTATAGTTCCGTTCAGGTTGGGTACCGTAGGGTTAGGGATCGGAAATTGACGAAACCGGAATTGGGGCA
TCTCCAGAAAGCTGGAGCGATTCCAATGCGCCATTTGCAGGAGTTTCGTCTTGAGTCTGTTGATGGATTTGAGCCCAATCAGCGCCTAGTTTTCAATGAACTTTTCAAGG
AGGGCGACCTGGTTGATGTCTCGGGCACTACAATTGGAAAGGGATTTCAAGGTTCTTATTTATGTGTGTGGATAAGGATGTGTCTGTGCTATCTTGGCAAGCTTTCATTG
CAAAACACATTCATTGTCATCCCTTGTCATGGTGGAATCAAGAGGCACAACTTCAAAAGGGGTCCGATGACCCACGGTTCCAAGAGTCACAGAGCACTTGGATCAATCGG
TGCAGGAACTACACCGGGGCGTGTTTACAAGGGGAAGAAGATGCCTGGAAGGATGGGAGGAACCAAGAGAAAAATCAGAAAACTTAGGATTGTAAAGATTGACGAGGACC
TTAATGTTGTGATGATCAAAGGCGCCGTCCCAGGTAAGCCAGGAAACCTCCTTCGTATAGCTCCTGCAAAGATAGTAGGAAAGAACATTCCTAAGAACTAG
Protein sequenceShow/hide protein sequence
MSIISFSSASTSSRYPIFTNNASSSSSFSSTSSSLTLRTSFLALPLKSRRSNNLRLQFPTRRTTRRPNDGLSVCMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKE
GNIVTQVKTEATDGYSSVQVGYRRVRDRKLTKPELGHLQKAGAIPMRHLQEFRLESVDGFEPNQRLVFNELFKEGDLVDVSGTTIGKGFQGSYLCVWIRMCLCYLGKLSL
QNTFIVIPCHGGIKRHNFKRGPMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLRIVKIDEDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN