| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004154029.1 RNA polymerase sigma factor sigB [Cucumis sativus] | 1.9e-293 | 90.36 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANYS HHSFLPTA SSYTKVRDPHSLRTQCILSAASP TSTGTATT +VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQSS KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
DMEPTSEELELLQDELSESITV+SKRQTERKARRTRAAEKT TSV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
EVISDPEAET EDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Query: KRTKHLQQYLMS
KRTKHLQQY+MS
Subjt: KRTKHLQQYLMS
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| XP_008460092.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo] | 3.2e-293 | 90.52 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN S HHSF+PTA SSYTKVRDPHSLRTQCILSAASP TSTGTATT NVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQ S KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
D+EPTS+ELELLQDELSESITV+SKRQTERKARRTRAAEKT TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
EVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Query: KRTKHLQQYLMS
KRTKHLQQYLMS
Subjt: KRTKHLQQYLMS
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| XP_008460093.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Cucumis melo] | 5.3e-280 | 87.75 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN S HHSF+PTA SSYT SP TSTGTATT NVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQ S KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
D+EPTS+ELELLQDELSESITV+SKRQTERKARRTRAAEKT TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
EVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Query: KRTKHLQQYLMS
KRTKHLQQYLMS
Subjt: KRTKHLQQYLMS
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| XP_022155781.1 RNA polymerase sigma factor sigB [Momordica charantia] | 1.3e-281 | 86.75 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFK-------TAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRS
MSCLLPQFKCHPETFSIQFK T ANYS HH+FLPTANSS TKVRDPHSLRTQCILSAASPSTSTGTATTFNV+RLKLPP D NTDS+S ERLRS
Subjt: MSCLLPQFKCHPETFSIQFK-------TAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQ
YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DA LL NNSNSS+ G KSQSSSK DALHFKW QFMESERADIIG PVGVNNRP EGDALQ
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQ
Query: TSTTESDDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELS
T ESD +PT+EELELLQDELS +I VRS+RQTER+A+RTRAAEK A TSVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELS
Subjt: TSTTESDDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELS
Query: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
EGIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Subjt: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Query: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIA
KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIA
Query: YSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
EVISDPEAET+ED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Subjt: YSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Query: FRKLKNKKRTKHLQQYLMS
FRKLKNKKRTKHLQQYLMS
Subjt: FRKLKNKKRTKHLQQYLMS
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| XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | 1.1e-296 | 91.52 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSP-HHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVE
MSCLLPQFKCHPETFSIQFKTAANY+P HH+FLPTANSSYTKVRDPHSLRTQCILSAASP TSTGTATT NVDRL LPPFDTNTDSVSVERLRSYLGAVE
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSP-HHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVE
Query: SSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTES
SSLASTLLTSEEATIAAAAAEAV LAKAAVKVARDA LLANNSNSSRAG KS+SS +PDALHFKWAQFMESERADIIGEPVGVNNRP+E DALQ STT+S
Subjt: SSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTES
Query: DDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDL
DDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTA TSVVSLKSGSSSRKKRNS+QEVDYSDPLRYLRATTSTSRLLTA EELELSEGIQDL
Subjt: DDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDL
Query: LKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA
LKLERLQEELA+RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA
Subjt: LKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA
Query: HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFP
HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFP
Query: LFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN
EVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN
Subjt: LFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKN
Query: KKRTKHLQQYLMS
KKRTKHLQQYL+S
Subjt: KKRTKHLQQYLMS
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0K917 RNA polymerase sigma factor | 9.2e-294 | 90.36 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANYS HHSFLPTA SSYTKVRDPHSLRTQCILSAASP TSTGTATT +VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQSS KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
DMEPTSEELELLQDELSESITV+SKRQTERKARRTRAAEKT TSV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
EVISDPEAET EDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Query: KRTKHLQQYLMS
KRTKHLQQY+MS
Subjt: KRTKHLQQYLMS
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| A0A1S3CBA5 RNA polymerase sigma factor | 2.6e-280 | 87.75 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN S HHSF+PTA SSYT SP TSTGTATT NVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQ S KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
D+EPTS+ELELLQDELSESITV+SKRQTERKARRTRAAEKT TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
EVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Query: KRTKHLQQYLMS
KRTKHLQQYLMS
Subjt: KRTKHLQQYLMS
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| A0A1S3CD00 RNA polymerase sigma factor | 1.6e-293 | 90.52 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN S HHSF+PTA SSYTKVRDPHSLRTQCILSAASP TSTGTATT NVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQ S KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
D+EPTS+ELELLQDELSESITV+SKRQTERKARRTRAAEKT TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
EVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNK
Query: KRTKHLQQYLMS
KRTKHLQQYLMS
Subjt: KRTKHLQQYLMS
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| A0A5A7T955 RNA polymerase sigma factor | 1.3e-276 | 90.34 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN S HHSFLPTA SSYTKVRDPHSLRTQCILSAASP TSTGTATT NVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDA LLANN NSSRAGTKSQ S KPDALHFKWAQFMESERADIIGEPVGVN RP+EGDAL+ STTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQTSTTESD
Query: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
D+EPTSEELELLQDELSESITV+SKRQTERKARRTRAAEKT TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Subjt: DMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPL
Query: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMG
EVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: FSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMG
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| A0A6J1DSR7 RNA polymerase sigma factor | 6.2e-282 | 86.75 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFK-------TAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRS
MSCLLPQFKCHPETFSIQFK T ANYS HH+FLPTANSS TKVRDPHSLRTQCILSAASPSTSTGTATTFNV+RLKLPP D NTDS+S ERLRS
Subjt: MSCLLPQFKCHPETFSIQFK-------TAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQ
YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DA LL NNSNSS+ G KSQSSSK DALHFKW QFMESERADIIG PVGVNNRP EGDALQ
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDALQ
Query: TSTTESDDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELS
T ESD +PT+EELELLQDELS +I VRS+RQTER+A+RTRAAEK A TSVVS+KSGSSSRKKRNS+QEVDYSDPLRYLRATTS SRLLTATEELELS
Subjt: TSTTESDDMEPTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELS
Query: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
EGIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Subjt: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Query: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIA
KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Subjt: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIA
Query: YSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
EVISDPEAET+ED+LIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Subjt: YSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Query: FRKLKNKKRTKHLQQYLMS
FRKLKNKKRTKHLQQYLMS
Subjt: FRKLKNKKRTKHLQQYLMS
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 4.1e-182 | 60.74 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T+ +P H+ + + QC +S SP+ T + +V +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDAL
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L N++N T +SS D KW QF E ERA I+G + V++ + D +
Subjt: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDAL
Query: QTSTTESD---DME-PTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATE
S + + D+E EE+ELL+++ S S+ VRS RQTERKARR + EKTA + + S+K+GSS +KKR QEVD++DPLRYLR TTS+S+LLT E
Subjt: QTSTTESD---DME-PTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATE
Query: ELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
E ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Subjt: ELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Query: ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
A+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKPS
Subjt: ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Query: VRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQ
EVI+DPEA T+ED+LIK+FM+QDL+KVLDSL RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQ
Subjt: VRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQ
Query: IESCAFRKLKNKKRTKHLQQYLMS
IES AFRKLKNKKR HLQQYL++
Subjt: IESCAFRKLKNKKRTKHLQQYLMS
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| P26683 RNA polymerase sigma factor SigA | 7.0e-73 | 42.7 | Show/hide |
Query: KSGSSSRKKRNSIQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
KSG +++ +R + + + D +R RLL A EE+EL+ I DLL+LER++E L+E+ +P ++WA A + R RL+ G KDKM
Subjt: KSGSSSRKKRNSIQEVDY--SDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
Query: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P
Subjt: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD
Query: DEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVL
+EEIA +++++L + + + P SLE IG ++ + + D +S + ET ED + K +++DLEKVL
Subjt: DEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVL
Query: DSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
DSL+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A RKL++ R L++Y+
Subjt: DSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
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| P38023 RNA polymerase sigma factor SigA1 | 2.3e-68 | 39.09 | Show/hide |
Query: SEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSL------------KSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELS
++ ELL L + T ++KR + +KA T A + ATT + + ++ K + +++ D +R RLL A EE+EL+
Subjt: SEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSL------------KSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELS
Query: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
I DLL LER+++EL E+ P+ A+WAAA R+RL G KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+
Subjt: EGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Query: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIA
KFSTYA WWI+QA+ ++++DQSRTIRLP H+ E R+K+ K L E GR P +EEIA +++++L + + + P SLE IG ++ +
Subjt: KFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIA
Query: YSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
+ D ++ + ET ED + K +++DLE VL +L+PRER V+R R+G++DGRMKTL+EIG++ V+RERIRQIE+ A
Subjt: YSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Query: FRKLKNKKRTKHLQQYL
RKL++ R L++Y+
Subjt: FRKLKNKKRTKHLQQYL
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| P74565 RNA polymerase sigma factor SigA | 2.7e-61 | 36.18 | Show/hide |
Query: KRNSIQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFA------------------------------------
+++++++ Y+ D +R RLL A EE+EL+ I DLL+LE +++ L + +P+
Subjt: KRNSIQEVDYS-DPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFA------------------------------------
Query: --------QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
+W+ N R+RL KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ ++++
Subjt: --------QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Query: DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLF
DQSRTIRLP H+ E R+K+ K L E R P +EEIAE +++++L + + + P SLE IG ++ + + D
Subjt: DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLF
Query: DSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
++ + ET ED + K +++DLE VLD+L+PRER V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A RKL++ R L++Y+
Subjt: DSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 1.1e-62 | 37.89 | Show/hide |
Query: VRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQ
VRSKRQ ER+A+ RA + + +S++KK Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT +
Subjt: VRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQ
Query: WAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
WA A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RKS+ SRTIRLP
Subjt: WAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Query: FHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEV
++ +V EARK E P EE+A G+S ++L +L + P S++Q P++S D T FQE+
Subjt: FHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEV
Query: ISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
D ET + KQ M+ + +L+ L+P+ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: ISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 2.9e-183 | 60.74 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T+ +P H+ + + QC +S SP+ T + +V +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANYSPHHSFLPTANSSYTKVRDPHSLRTQCILSAASPSTSTGTATTFNVDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDAL
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L N++N T +SS D KW QF E ERA I+G + V++ + D +
Subjt: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAVLLANNSNSSRAGTKSQSSSKPDALHFKWAQFMESERADIIGEPVGVNNRPVEGDAL
Query: QTSTTESD---DME-PTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATE
S + + D+E EE+ELL+++ S S+ VRS RQTERKARR + EKTA + + S+K+GSS +KKR QEVD++DPLRYLR TTS+S+LLT E
Subjt: QTSTTESD---DME-PTSEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATE
Query: ELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
E ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Subjt: ELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Query: ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
A+KGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQLYSE G+HP +EEIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKPS
Subjt: ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPS
Query: VRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQ
EVI+DPEA T+ED+LIK+FM+QDL+KVLDSL RE+QVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQ
Subjt: VRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQ
Query: IESCAFRKLKNKKRTKHLQQYLMS
IES AFRKLKNKKR HLQQYL++
Subjt: IESCAFRKLKNKKRTKHLQQYLMS
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| AT1G64860.1 sigma factor A | 1.7e-37 | 30.37 | Show/hide |
Query: KARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQ
+ RR A +KT T V ++ SS ++ R ++ V D +L+ E + LS+ I+ L+L+ + L +R G EP+ Q A + +++
Subjt: KARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQ
Query: RTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR
L+ L L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD+SKGF+ STY +WWI+Q V ++L D SRT+RLP H+ E
Subjt: RTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR
Query: VKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETA
++ A+ +L E G P + IAE+ +S K++ A ++ + ++++ PS+ P +H H+ + +
Subjt: VKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETA
Query: EDMLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
D L +K+++ K++ +L RE+++IR +G+ D T ++I + +G+SRER+RQ+ A KLK+ R + ++ ++
Subjt: EDMLIKQFMKQDLEKVLD-SLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
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| AT2G36990.1 RNApolymerase sigma-subunit F | 7.9e-64 | 37.89 | Show/hide |
Query: VRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQ
VRSKRQ ER+A+ RA + + +S++KK Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT +
Subjt: VRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQ
Query: WAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
WA A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RKS+ SRTIRLP
Subjt: WAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Query: FHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEV
++ +V EARK E P EE+A G+S ++L +L + P S++Q P++S D T FQE+
Subjt: FHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEV
Query: ISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
D ET + KQ M+ + +L+ L+P+ER++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: ISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
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| AT3G53920.1 RNApolymerase sigma-subunit C | 2.0e-51 | 31.28 | Show/hide |
Query: SEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERL
S+ EL+ ++ + V S+R+ ++KARR+ + S + + R N+I P +Y + SR E E+S G++ + +ER+
Subjt: SEELELLQDELSESITVRSKRQTERKARRTRAAEKTATTSVVSLKSGSSSRKKRNSIQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERL
Query: QEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ
+ +L E G + + WAAAAG+N++ L + L+YG C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+++GAE+FD ++G+KFSTY +WI++
Subjt: QEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ
Query: AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHC
++ +S +R + +P ++ +++ARK L + +G ++ DEEIA+ G S+K++ A K S+++K+G
Subjt: AVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG-RHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSVRLIAYSVSFPLFSHC
Query: NITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTK
D F T F E D E+ E+ +++Q ++D+ +L+ L PRE+QV+ R+G++D R K+L+EIG+++ VS+E IR+IE A KL+++ +
Subjt: NITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTK
Query: HLQQYL
L+ YL
Subjt: HLQQYL
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| AT5G13730.1 sigma factor 4 | 5.9e-43 | 33.23 | Show/hide |
Query: STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
S S L+ EE++L +++ KLE L + E NE A+ G +R+ + L ++K+ + RLV+SIA YQG G+NLQDL+QEG
Subjt: STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
GL+RGAE+FD +G+K STY +WWIKQA+ ++++ +SR ++LP M E T +V EA L + R P EEIAE L++ + + ++P SL++
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
Query: IGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
N + QE++ P+ E+M+ ++ MK ++E++L SL RE +V+ FG+ + +EIG+
Subjt: IGINQNLKPSVRLIAYSVSFPLFSHCNITIFDLFDSHTLFQEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPRERQVIRWRFGMEDGRMKTLQEIGEI
Query: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
+ +SRER+RQI A +KL+N L+ Y S
Subjt: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
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