; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G00920 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G00920
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCAP domain containing protein
Genome locationClcChr06:808998..811065
RNA-Seq ExpressionClc06G00920
SyntenyClc06G00920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593718.1 hypothetical protein SDJN03_13194, partial [Cucurbita argyrosperma subsp. sororia]2.3e-11187.34Show/hide
Query:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP
        MMM+KLC+  CF   S L AVLVSSKYHGNPAND+VDIINRNRTAAKLS LSDSAGLGC+ALQF NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELP
Subjt:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP

Query:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS
        TFDTITG IVACQPEY EPTEAFSRALIPDKKTLSLL NKSHTEVGVGMVGVHKGPF WCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR HS
Subjt:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS

Query:  NGAFWNNVSLILFFFIISCKIFSFSLMVM
        NGAFWNNV++++ FFIIS KI S S  VM
Subjt:  NGAFWNNVSLILFFFIISCKIFSFSLMVM

XP_008460047.1 PREDICTED: uncharacterized protein LOC103498980 [Cucumis melo]5.5e-11392.92Show/hide
Query:  MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT
        MMRKLCIF+CFI+ SFLFAVLVSSK+HGNPAND+VDIINRNRTAAKLSHLSDSAGLGCMALQF+NFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT
Subjt:  MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT

Query:  FDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSN
        FDTITGQIVACQ EY EPTEAFSRAL+PDKKTLSLL+NKSHTEVGVG+VGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS+
Subjt:  FDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSN

Query:  GAFWNNVSLILF
        GAFWNN S IL+
Subjt:  GAFWNNVSLILF

XP_022999943.1 uncharacterized protein LOC111494268 isoform X3 [Cucurbita maxima]4.7e-11287.77Show/hide
Query:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP
        MMM+KLC+  CF   S L AVLVSSKYHGNPAND+VDIINRNRTAAKLS LS+SAGLGCMALQF NFCKGNCT+NNTVNCNPSSDNFTE+FAPDCGVELP
Subjt:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP

Query:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS
        TFDTITG IVACQPEY EPTEAFSRALIPDKK LSLL NKSHTEVGVGMVGVHKGPF WCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR HS
Subjt:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS

Query:  NGAFWNNVSLILFFFIISCKIFSFSLMVM
        NGAFWNNVS+++ FFIIS KI SFS MVM
Subjt:  NGAFWNNVSLILFFFIISCKIFSFSLMVM

XP_023549079.1 uncharacterized protein LOC111807547 [Cucurbita pepo subsp. pepo]4.7e-11288.69Show/hide
Query:  MRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTF
        MR LC  +CF++ SFLFAVLVSSKYHGNPAND+VDIIN+NRTAAKLS LSD+AGLGCMALQF+NFCKGNC+SNNTVNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTF

Query:  DTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQP Y EPTEAFSRAL+PDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGS VECSRGHSNG
Subjt:  DTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWNNVSLILFFFIISCKIFS
        A WNNVS  LFF II CKI S
Subjt:  AFWNNVSLILFFFIISCKIFS

XP_038875229.1 uncharacterized protein LOC120067738 [Benincasa hispida]4.2e-12193.45Show/hide
Query:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP
        M+MRKLC F+CFI+ SFLFAVLVSSK+HGNPAND+VDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP
Subjt:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP

Query:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS
        TFDTITGQIVACQP Y EPTEAFSRAL+PDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVEC+RGHS
Subjt:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS

Query:  NGAFWNNVSLILFFFIISCKIFSFSLMVM
        NGAFWNNVS+ILFFFIISCKI +FS MVM
Subjt:  NGAFWNNVSLILFFFIISCKIFSFSLMVM

TrEMBL top hitse value%identityAlignment
A0A1S3CB60 uncharacterized protein LOC1034989802.7e-11392.92Show/hide
Query:  MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT
        MMRKLCIF+CFI+ SFLFAVLVSSK+HGNPAND+VDIINRNRTAAKLSHLSDSAGLGCMALQF+NFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT
Subjt:  MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT

Query:  FDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSN
        FDTITGQIVACQ EY EPTEAFSRAL+PDKKTLSLL+NKSHTEVGVG+VGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS+
Subjt:  FDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSN

Query:  GAFWNNVSLILF
        GAFWNN S IL+
Subjt:  GAFWNNVSLILF

A0A6J1HIR8 uncharacterized protein LOC111464418 isoform X15.6e-11186.9Show/hide
Query:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP
        MMM+KLC+  CF   S L AVLVSSKYHGNPAND+VDIINRNRTAAKLS LSDSAGLGC+ALQF NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELP
Subjt:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP

Query:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS
        TFDTIT  IVACQPEY EPTEAFSRALIPDKKTLSLL NKSHTEVGVGMVGVHKGPF WCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR HS
Subjt:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS

Query:  NGAFWNNVSLILFFFIISCKIFSFSLMVM
        NGAFWNNV++++ FFIIS KI S S  VM
Subjt:  NGAFWNNVSLILFFFIISCKIFSFSLMVM

A0A6J1KC53 uncharacterized protein LOC111494268 isoform X21.2e-11086.27Show/hide
Query:  MMMRKLCIFQCFIVYSFLFAVLVSSKYH----GNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCG
        MMM+KLC+  CF   S L AVLVSSKYH    GNPAND+VDIINRNRTAAKLS LS+SAGLGCMALQF NFCKGNCT+NNTVNCNPSSDNFTE+FAPDCG
Subjt:  MMMRKLCIFQCFIVYSFLFAVLVSSKYH----GNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCG

Query:  VELPTFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
        VELPTFDTITG IVACQPEY EPTEAFSRALIPDKK LSLL NKSHTEVGVGMVGVHKGPF WCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
Subjt:  VELPTFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS

Query:  RGHSNGAFWNNVSLILFFFIISCKIFSFSLMVM
        R HSNGAFWNNVS+++ FFIIS KI SFS MVM
Subjt:  RGHSNGAFWNNVSLILFFFIISCKIFSFSLMVM

A0A6J1KL52 uncharacterized protein LOC111494268 isoform X32.3e-11287.77Show/hide
Query:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP
        MMM+KLC+  CF   S L AVLVSSKYHGNPAND+VDIINRNRTAAKLS LS+SAGLGCMALQF NFCKGNCT+NNTVNCNPSSDNFTE+FAPDCGVELP
Subjt:  MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELP

Query:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS
        TFDTITG IVACQPEY EPTEAFSRALIPDKK LSLL NKSHTEVGVGMVGVHKGPF WCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR HS
Subjt:  TFDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHS

Query:  NGAFWNNVSLILFFFIISCKIFSFSLMVM
        NGAFWNNVS+++ FFIIS KI SFS MVM
Subjt:  NGAFWNNVSLILFFFIISCKIFSFSLMVM

A0A6J1L4J5 uncharacterized protein LOC1114990821.5e-11188.24Show/hide
Query:  MRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTF
        MR LCI +CF++ S LFAVLV+SK+HGNPAND+VDIIN+NRTAAKLS LSDSAGLGCMALQF+NFCKGNCTSNNTVNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTF

Query:  DTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG
        DTITGQIVACQP Y EPTEAFSRAL+PDKKTLSLLRN+SHTEVGVGMVGV+KGPFFWCVLFS+GKTNS+FVLENHGLGIKQKRGCFSGSSVECSRGHSNG
Subjt:  DTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNG

Query:  AFWNNVSLILFFFIISCKIFS
        AFWNNVS  LFF II CKI S
Subjt:  AFWNNVSLILFFFIISCKIFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02180.1 ferredoxin-related4.3e-6356.41Show/hide
Query:  MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT
        M  ++ I +  +++  L +VL SSK HGN A+++V I+N+NRTA KL  L++S GLGCMALQ+V  C+GNC  NNT++C    D+FT++FAP+CGVELPT
Subjt:  MMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPT

Query:  FDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
        F TITG I+ C  +Y  P  AFS  L  D   LS+LRN+SHTEVGVGM  +HKG FFWC+LFS G  NS+FVLE++G GIKQ+ GC+SGS+  CS
Subjt:  FDTITGQIVACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGAGGAAGCTCTGTATCTTCCAGTGCTTCATTGTCTATTCTTTCCTCTTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCAAATGATATTGTGGA
TATCATCAACAGAAACCGAACTGCTGCAAAGCTCTCTCACCTGAGTGACAGTGCAGGTCTTGGGTGCATGGCGTTGCAATTCGTGAACTTCTGCAAAGGAAACTGTACTA
GTAACAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACTGAAATCTTCGCTCCAGATTGCGGTGTCGAGTTGCCAACTTTTGACACAATAACCGGCCAAATTGTG
GCTTGTCAACCTGAATATTTCGAGCCTACCGAGGCCTTCTCTCGAGCGCTCATTCCTGACAAGAAAACTCTCTCACTGTTGAGGAACAAATCTCACACAGAAGTAGGGGT
GGGGATGGTTGGGGTCCATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAA
AGAGAGGCTGTTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACAATGTTTCCTTAATCCTGTTCTTTTTTATTATCTCTTGCAAG
ATTTTTTCTTTTTCATTAATGGTGATGTGA
mRNA sequenceShow/hide mRNA sequence
CAATCTCTGCAACAATTTGATCAATAAATCTCTCTCCCTTTCTTTTTCCCGGAAAAATTTCCACTCCCCATTACACCCTTTTCCCCAACTAGGGTTTCTTTTCCTTTCCC
ACTTCCATTTCTCTTCTTTCTTCCACTGTAAAGCAAACCCCTCTTTTTTCTTCTTCTCTTTTTTGCCTTTTTATCTTCTCTATTTCTTTTTACAGTCAGTCGTTGTTTGT
GGTAATGATGATGAGGAAGCTCTGTATCTTCCAGTGCTTCATTGTCTATTCTTTCCTCTTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCAAATGATATTG
TGGATATCATCAACAGAAACCGAACTGCTGCAAAGCTCTCTCACCTGAGTGACAGTGCAGGTCTTGGGTGCATGGCGTTGCAATTCGTGAACTTCTGCAAAGGAAACTGT
ACTAGTAACAACACTGTAAATTGCAATCCATCCTCCGACAACTTCACTGAAATCTTCGCTCCAGATTGCGGTGTCGAGTTGCCAACTTTTGACACAATAACCGGCCAAAT
TGTGGCTTGTCAACCTGAATATTTCGAGCCTACCGAGGCCTTCTCTCGAGCGCTCATTCCTGACAAGAAAACTCTCTCACTGTTGAGGAACAAATCTCACACAGAAGTAG
GGGTGGGGATGGTTGGGGTCCATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAG
CAAAAGAGAGGCTGTTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGGTCACTCCAATGGAGCTTTTTGGAACAATGTTTCCTTAATCCTGTTCTTTTTTATTATCTCTTG
CAAGATTTTTTCTTTTTCATTAATGGTGATGTGAAAGTAGAGATTGATGATTAAAATTTTTGTTCTATACTGAATTACAGGAAGAGTTAGAAGCCAATTTGAAAGAGCAT
TGTATGTTGAGGTCTTTTCTGCTTTATAATCTACCTTTCTGAATATAGCCCTTTTTTTAGTGTTTTACTTCCATACAAGTAATTTTAG
Protein sequenceShow/hide protein sequence
MMMRKLCIFQCFIVYSFLFAVLVSSKYHGNPANDIVDIINRNRTAAKLSHLSDSAGLGCMALQFVNFCKGNCTSNNTVNCNPSSDNFTEIFAPDCGVELPTFDTITGQIV
ACQPEYFEPTEAFSRALIPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRGHSNGAFWNNVSLILFFFIISCK
IFSFSLMVM