; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G01410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G01410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRmlC-like cupins superfamily protein
Genome locationClcChr06:1330479..1331313
RNA-Seq ExpressionClc06G01410
SyntenyClc06G01410
Gene Ontology termsNA
InterPro domainsIPR008579 - (S)-ureidoglycine aminohydrolase, cupin-3 domain
IPR011051 - RmlC-like cupin domain superfamily
IPR014710 - RmlC-like jelly roll fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592849.1 hypothetical protein SDJN03_12325, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4483.33Show/hide
Query:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV
        NEE  +NNPSTNN L+II+ERNPSQAKLS LNI  WPKWGCSAGKYQLKFEAEETCYLVKGKVKAY KG    S+  EYTEFGAGDLV IPKGLSCTWDV
Subjt:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV

Query:  SVAVDKFYKFESQS
        SVAVDKFYKFES S
Subjt:  SVAVDKFYKFESQS

KAG7025258.1 hypothetical protein SDJN02_11753 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4484.21Show/hide
Query:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV
        NEE  +NNPSTNN L+IIVERNPSQAKLS LNI  WPKWGCSAGKYQLKFEAEETCYLVKGKVKAY KG    S+  EYTEFGAGDLV IPKGLSCTWDV
Subjt:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV

Query:  SVAVDKFYKFESQS
        SVAVDKFYKFES S
Subjt:  SVAVDKFYKFESQS

XP_004140583.1 uncharacterized protein LOC101208389 [Cucumis sativus]4.7e-5290.76Show/hide
Query:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS-----CEEYTEFGAGDLVIIPKGLS
        NEEEGNNN   NN LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS     CEEY EFGAGDLVIIPKGLS
Subjt:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS-----CEEYTEFGAGDLVIIPKGLS

Query:  CTWDVSVAVDKFYKFESQS
        CTWDVSVAVDKFYKFESQS
Subjt:  CTWDVSVAVDKFYKFESQS

XP_008459983.1 PREDICTED: uncharacterized protein LOC103498932 [Cucumis melo]9.6e-5389.43Show/hide
Query:  NEEEGN----NNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS-----CEEYTEFGAGDLVIIP
        NEE GN    NNPSTNN LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS     CEEY EFGAGDLVIIP
Subjt:  NEEEGN----NNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS-----CEEYTEFGAGDLVIIP

Query:  KGLSCTWDVSVAVDKFYKFESQS
        KGLSCTWDVSVAVDKFYKFESQS
Subjt:  KGLSCTWDVSVAVDKFYKFESQS

XP_038906875.1 uncharacterized protein LOC120092760 [Benincasa hispida]4.9e-5794.96Show/hide
Query:  MANNEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGID--SSSSCEEYTEFGAGDLVIIPKGLS
        MANNEEEGN NPSTNN+LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGID  SSSSCEEYTEFGAGDLV IPKGLS
Subjt:  MANNEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGID--SSSSCEEYTEFGAGDLVIIPKGLS

Query:  CTWDVSVAVDKFYKFESQS
        CTWDVSVAVDKFYKFESQS
Subjt:  CTWDVSVAVDKFYKFESQS

TrEMBL top hitse value%identityAlignment
A0A1S3CBJ5 uncharacterized protein LOC1034989324.6e-5389.43Show/hide
Query:  NEEEGN----NNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS-----CEEYTEFGAGDLVIIP
        NEE GN    NNPSTNN LKIIVERNPSQAKLSQLNIH WPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS     CEEY EFGAGDLVIIP
Subjt:  NEEEGN----NNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSS-----CEEYTEFGAGDLVIIP

Query:  KGLSCTWDVSVAVDKFYKFESQS
        KGLSCTWDVSVAVDKFYKFESQS
Subjt:  KGLSCTWDVSVAVDKFYKFESQS

A0A2P5C0K2 RmlC-like cupins superfamily protein2.6e-4070.69Show/hide
Query:  ANNEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTW
        +++    +N+ S+   L+IIVE+NPS+A+LS+LNI CWPKWGCS GKYQLKF+AEETCYL+KGKVKAYPKG    SS  E+ EFGAGDLV IPKGLSCTW
Subjt:  ANNEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTW

Query:  DVSVAVDKFYKFESQS
        DVSVAVDK+YKFES S
Subjt:  DVSVAVDKFYKFESQS

A0A6J1H6X6 uncharacterized protein LOC1114609981.8e-4484.21Show/hide
Query:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV
        NEE  +NNPSTNN L+IIVERNPSQAKLS LNI  WPKWGCSAGKYQLKFEAEETCYLVKGKVKAY KG    S+  EYTEFGAGDLV IPKGLSCTWDV
Subjt:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV

Query:  SVAVDKFYKFESQS
        SVAVDKFYKFES S
Subjt:  SVAVDKFYKFESQS

A0A6J1KU03 uncharacterized protein LOC1114981883.9e-4483.33Show/hide
Query:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV
        NEE  +NNPSTNN L+IIVERNPS+AKLS LNI  WPKWGCSAGKYQLKFEAEETCYLVKGKVKAY KG    S+  EYTEFGAGDLV IPKGLSCTWDV
Subjt:  NEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDV

Query:  SVAVDKFYKFESQS
        SVAVDKFYKFES S
Subjt:  SVAVDKFYKFESQS

W9QZN5 Cupin_3 domain-containing protein1.5e-4075Show/hide
Query:  NNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDK
        +N S NN+L+IIVERNPS+A+LS+L I CWPKWGCS GKYQLKF+AEETCYL+KGKVKAYPKG        E+ EFGAGDLVIIPKG+SCTWDVS+AVDK
Subjt:  NNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDK

Query:  FYKFESQS
        +YKFES S
Subjt:  FYKFESQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G04300.1 RmlC-like cupins superfamily protein2.6e-3261.86Show/hide
Query:  LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE
        + I++E NPS  +LS L +  WPKW C  GKY L FE  ETCYLVKGKVK YPKG        E+ EFGAGDLV IPKGLSCTWDVS+ +DK YKF+
Subjt:  LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE

AT4G10280.1 RmlC-like cupins superfamily protein1.9e-1437.86Show/hide
Query:  PSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFY
        P+  + +KI+  R  S  KL+QL +  WPKW  +  K+  +F+  ET Y ++GKVK    G D     EE  E G GD+V+ PK +   W+++ AV K Y
Subjt:  PSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFY

Query:  KFE
          E
Subjt:  KFE

AT4G10290.1 RmlC-like cupins superfamily protein1.1e-0936.84Show/hide
Query:  VERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQ
        V R  S AKL++L +  W  W     K+  KF+  ET Y V+GK+K     ++      E  EF AGDLV+ P+ ++   DV   V K Y  ES+
Subjt:  VERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFESQ

AT4G10300.1 RmlC-like cupins superfamily protein1.3e-2855.67Show/hide
Query:  LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE
        L I +E+NP ++KL+QL +  WPKWGC   K+   + A+ETCYL++GKVK YP G D      E  E  AGD V+ PKG+SCTWDVSVAVDK Y+FE
Subjt:  LKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFE

AT4G28703.1 RmlC-like cupins superfamily protein3.1e-3365Show/hide
Query:  KIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEY---TEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFES
        +IIVE+NPSQA+L +L    WPKWGCS GKY LK+EAEE CY+++GKVK YPK   SSSS  E     EFGAGD+V  PKGLSCTWDVS++VDK Y F S
Subjt:  KIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEY---TEFGAGDLVIIPKGLSCTWDVSVAVDKFYKFES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATAATGAAGAAGAAGGCAATAACAATCCCTCAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAGCTCAACATCCA
CTGTTGGCCAAAATGGGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGTTATTTAGTGAAAGGGAAAGTAAAAGCTTATCCAAAAGGAATTG
ATTCTTCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTTGGGATGTCTCTGTTGCTGTTGATAAATTC
TACAAGTTTGAATCTCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
AACAAAACCCTCTTAATTATGTATATATAAATCTCACGCACACAAGGTTGTTGTTCTTCAATTCTCCTAATTCTCTTCCATTCAAAACCAAAAGAGATTCCTTTCCTTTC
CCTTTCATCTCCTAATTTGTGTTTCTATAAATTCCCCCACAGTCCCACCCTTCTGTTTTCCCAAACACTTCTTGTGAGGCAAAAGTTTGTTCTCATCTCTCTAGTATGGC
AAATAATGAAGAAGAAGGCAATAACAATCCCTCAACAAACAACCACCTCAAAATCATTGTAGAAAGAAACCCTTCTCAAGCCAAGCTTTCACAGCTCAACATCCACTGTT
GGCCAAAATGGGGTTGTTCAGCAGGGAAATACCAGCTGAAATTTGAGGCAGAAGAGACTTGTTATTTAGTGAAAGGGAAAGTAAAAGCTTATCCAAAAGGAATTGATTCT
TCTTCTTCTTGTGAGGAATACACTGAATTTGGAGCTGGGGATTTGGTCATTATTCCTAAAGGCCTTAGCTGCACTTGGGATGTCTCTGTTGCTGTTGATAAATTCTACAA
GTTTGAATCTCAATCTTAAATATTTTTAACTATAATTACCATTTTCCCATTCCTTTGTAAATAAATATTTTTTTTTTCTCCTTAATCTTCTGCATCTTTCAAAGATTTGA
ATCTCTCGTTTCTAAGTCGAATACTTACTTTTTACGGTTAAATTAAAACTCGGGTTTTAGATTGTAGAGAAGGGTTCAAGAGAGTTCAAGATAAGTCTTT
Protein sequenceShow/hide protein sequence
MANNEEEGNNNPSTNNHLKIIVERNPSQAKLSQLNIHCWPKWGCSAGKYQLKFEAEETCYLVKGKVKAYPKGIDSSSSCEEYTEFGAGDLVIIPKGLSCTWDVSVAVDKF
YKFESQS