CuGenDBv2

Gene ID	Clc06G01510
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Vacuolar sorting-associated protein 62
Genome location	ClcChr06:1409657..1413395
RNA-Seq Expression	Clc06G01510
Synteny	Clc06G01510
Gene Ontology terms	NA
InterPro domains	IPR014807 - Cytochrome c oxidase assembly factor 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039892.1 Vacuolar sorting-associated protein 62 [Cucumis melo var. makuwa]

1.8e-80

91.57

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Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        ++SIKPSE+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFA AACVSCT CQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

XP_004140577.1 uncharacterized protein LOC101206927 [Cucumis sativus]

1.0e-80

90.96

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Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        ++SIKP+E+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEK RNNQAVIDAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINL+EKFA AACVSCTDCQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

XP_008459968.1 PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo]

1.8e-80

91.57

Show/hide

Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        ++SIKPSE+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFA AACVSCT CQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

XP_038876218.1 uncharacterized protein LOC120068500 isoform X1 [Benincasa hispida]

1.2e-84

95.18

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Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        +SSIKPSEDGVN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDILIMDALLHVP NEGKQKT+RINLTEKFA AACVSCTDCQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

XP_038876219.1 uncharacterized protein LOC120068500 isoform X2 [Benincasa hispida]

1.2e-84

95.18

Show/hide

Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        +SSIKPSEDGVN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDILIMDALLHVP NEGKQKT+RINLTEKFA AACVSCTDCQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KF26 Uncharacterized protein

5.0e-81

90.96

Show/hide

Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        ++SIKP+E+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEK RNNQAVIDAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINL+EKFA AACVSCTDCQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

A0A1S3CBF0 uncharacterized protein LOC103498925 isoform X1

8.6e-81

91.57

Show/hide

Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        ++SIKPSE+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFA AACVSCT CQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

A0A1S3CBW1 uncharacterized protein LOC103498925 isoform X2

1.1e-80

92.12

Show/hide

Query:  SSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL
        +SIKPSE+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQG GIL
Subjt:  SSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGIL

Query:  QLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        QLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFA AACVSCT CQPPE
Subjt:  QLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

A0A5D3DMW4 Vacuolar sorting-associated protein 62

8.6e-81

91.57

Show/hide

Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        ++SIKPSE+ VN+SWGRKAVSFVLITVTGGVALSALDDLAIY SCSSKAIEKARNNQAV DAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQG GI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE
        LQLKAVRNG DSWI FLRPRDWDIL+MDALL+VPENEGKQKTLRINLTEKFA AACVSCT CQPPE
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAACVSCTDCQPPE

A0A6J1JLR1 uncharacterized protein LOC111488050 isoform X2

1.2e-79

87.21

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Query:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
        +SS++PSE+GVN+SWGRKAVSFVL+TVTGGVALSALDDLAIY SCSSKAIEKA+NN+A+IDAIGEPI KGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI
Subjt:  TSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGI

Query:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAA--CVSCTDCQPP--EKR
        +QLKAVRNG DSWI FLRPRDWDILIMDALLHVPENEGKQ+TLRINLTEKFA AA  CV+CTDCQ P  EKR
Subjt:  LQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTEKFASAA--CVSCTDCQPP--EKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20390.1 unknown protein

4.1e-59

70.7

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Query:  FACFMKKETSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPV
        F  F K  ++S      G   S+GRKAVSFVLITVTGGVALSALDDL+IYR CSSKA+EK  N++ +I+AIGEPI KGPWYNASLAV+H+RHS+SC+FPV
Subjt:  FACFMKKETSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPV

Query:  SGPQGTGILQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTE
         GPQGTGIL LKAVRNG DS   FL+ RDWDILIMDAL+HVP NEG Q+TLRIN+T+
Subjt:  SGPQGTGILQLKAVRNG-DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTE

AT2G20390.2 unknown protein

6.1e-55

57.51

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Query:  FACFMKKETSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPV
        F  F K  ++S      G   S+GRKAVSFVLITVTGGVALSALDDL+IYR CSSKA+EK  N++ +I+AIGEPI KGPWYNASLAV+H+RHS+SC+FPV
Subjt:  FACFMKKETSSIKPSEDGVNRSWGRKAVSFVLITVTGGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPV

Query:  SGPQGTGILQLKAVRNG-------------------------------------DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTE
         GPQGTGIL LKAVRNG                                     DS   FL+ RDWDILIMDAL+HVP NEG Q+TLRIN+T+
Subjt:  SGPQGTGILQLKAVRNG-------------------------------------DSWIPFLRPRDWDILIMDALLHVPENEGKQKTLRINLTE

Sequences

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CDS sequence

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ATGTATAAGGGAGTGAAATTAAAGACAGCTTATTTTAGTGGGGAAGCGATTGAAGGAGCAAGCAAAGCTGAAAATGCTGGCGAAAAGGTTCGTTTCCTTGTTCAAGCGCT
CTCCAAATCCACAGTCTTCCAGTTACTAATTCACCCACCAACTTCAGTTGAACATGGAATCAATCGATTGCCCGCATTTTTTGCAAGAGATATATATCTGGGTTTTTCAA
TTTTTGCATGTTTTATGAAAAAGGAAACCAGTTCCATAAAGCCATCGGAGGATGGGGTGAATAGATCCTGGGGTCGGAAAGCAGTCTCTTTTGTACTTATTACTGTTACT
GGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCGTAGCTGTAGCAGCAAAGCCATAGAGAAAGCCAGAAACAATCAAGCAGTTATAGATGCTATTGGAGA
ACCCATTGCCAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCATAAGAGACATTCTCTATCCTGCACGTTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCC
AACTGAAGGCAGTTCGTAATGGAGATTCCTGGATTCCTTTTCTCCGGCCTCGAGACTGGGACATTCTGATCATGGATGCTCTCCTCCATGTTCCTGAAAACGAAGGTAAG
CAGAAAACATTGCGTATTAATCTCACTGAGAAGTTTGCCTCCGCTGCTTGTGTCTCATGCACTGATTGTCAGCCTCCAGAGAAGAGATGA

mRNA sequence

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Protein sequence

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MYKGVKLKTAYFSGEAIEGASKAENAGEKVRFLVQALSKSTVFQLLIHPPTSVEHGINRLPAFFARDIYLGFSIFACFMKKETSSIKPSEDGVNRSWGRKAVSFVLITVT
GGVALSALDDLAIYRSCSSKAIEKARNNQAVIDAIGEPIAKGPWYNASLAVAHKRHSLSCTFPVSGPQGTGILQLKAVRNGDSWIPFLRPRDWDILIMDALLHVPENEGK
QKTLRINLTEKFASAACVSCTDCQPPEKR

Clc06G01510 (gene) of Watermelon (cordophanus) v2 genome