; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G01540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G01540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTPR_REGION domain-containing protein
Genome locationClcChr06:1425623..1427150
RNA-Seq ExpressionClc06G01540
SyntenyClc06G01540
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0009833 - plant-type primary cell wall biogenesis (biological process)
GO:0030244 - cellulose biosynthetic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016759 - cellulose synthase activity (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039891.1 TPR_11 domain-containing protein [Cucumis melo var. makuwa]3.5e-14176.33Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH
        MLLKSSSTPLLGSLLPPDHHHHH+D VGKH       SPS F FH  NK LSFS TTASL+SSPSFSDHH    P+GFRRT+S+GNLNT+SHAS+VI+VH
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH

Query:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM
        EDPFS DS NFKSSN     LKRSILQTIPSFSFYGSR R EED ++++D+  D E +EDDLGNFGI+       AAV+TPEVRAMEQAW+R  A GD M
Subjt:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM

Query:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQAS-SNIVSKKRDLRGAEEYYSRAILMD
        GF GDL+KEMYLARGLGIGG  G GGGGGR  S GG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+AS S ++  K DL  AEEYYSRAILMD
Subjt:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQAS-SNIVSKKRDLRGAEEYYSRAILMD

Query:  SQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA
        SQDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GK  AT+TY AAATA
Subjt:  SQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

KAG7014598.1 hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-13376.5Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFSTTASLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHED
        MLL+SSSTPLL SLLPPDH HHHHDAVGKH   SPSPS S FAF   NK L            SFSDHH   PTGFRRTHS+GNL TLSHASDVI+VHED
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFSTTASLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHED

Query:  PFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARI-EEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDAGDRMGFV
        PFSFDSFNFK SN L H   RS+L+TIPSFSFYGSRAR  EEDD+DDDQH D E DE  L NFG+ N  RMD AA+VTP VRAMEQAWTR ++GD +GFV
Subjt:  PFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARI-EEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDAGDRMGFV

Query:  GDLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMD-SQDG
        GDLQKEM+LARG G GG  GGGGGGRR S  G GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQA S +   K D+RGAEEYYSRAILMD SQDG
Subjt:  GDLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMD-SQDG

Query:  EILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTY
        EILSKYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED  SLGK MAT  +
Subjt:  EILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTY

XP_004140576.2 uncharacterized protein LOC101206684 [Cucumis sativus]3.7e-13574.87Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVH
        MLLKSSSTPLLGSLLPPD  HHHHD  GKH       SPS F FH  NK LSFS TTASL SSP+FSDHH    P+GFRRT+S+GNLNT+SHASDVI+VH
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVH

Query:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRMG
        EDPFSFDS NFKSS   CH LKRSILQTIPSFSFYGSRAR EE+++++D+  D + +ED LGNF ID       AA+VTPEVRAMEQAW+R  A GD MG
Subjt:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRMG

Query:  FVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQ
        FVGDL+KEMYLARGLGIGG  G GGGGGR    GG GGGGE++GMEEYYKKMVVENP NALVLSNYAEFLYQ       +K DL  AEEYYSRAILMDS 
Subjt:  FVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQ

Query:  DGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA
        DGE LSKYAKLVWELHHDQQKALSYFQRALQASP DSHVQAAYANFLWETEE+EDE SL K  AT+TY AAATA
Subjt:  DGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

XP_008459965.1 PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]5.0e-14075.47Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH
        MLLKSSSTPLLGSLLPPDHHHHH+D VGKH       SPS F FH  NK LSFS TTASL+SSPSFSDHH    P+GFRRT+S+GNLNT+SHAS+VI+VH
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH

Query:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM
        EDPFS DS NFKSSN     LKRS+LQTIPSFSFYGSR R EED ++++D+  D E +EDDLGNFGI+       AAV+TPEVRAMEQAW+R  A GD +
Subjt:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM

Query:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDS
        GFVGDL+KEMYLARGLGIGG  G GGGGGR  + GG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+       +K DLR AEEYYSRAILMDS
Subjt:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDS

Query:  QDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA
        QDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GK  AT+TY AAATA
Subjt:  QDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

XP_038874350.1 uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida]3.8e-14880Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFSTTASLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHED
        MLLKSSSTPLL SLLPPD   HHHD V KHSS   SPSP PFAFH  NKTLSFST ASL+SSPSFS     TPTGFRRTHS+GNLNTLSHA DVI+VHED
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFSTTASLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHED

Query:  PFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDAGDRMGFVG
        PFSFDSFNFK SN+  HSLKRS+LQTIPSFSFY SRAR EEDDDDDDQHTD E DED LG+FGI NR   D AA+VTPEV+AME AWT     D +GFVG
Subjt:  PFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDAGDRMGFVG

Query:  DLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEI
        D QKEMYL   LGIGG   GGGGGRRWS GG GGGGEQHGMEEYYKKMV+ENPGNALVLSNYAEFLYQ       ++ DLRGAEEYYSRAILMD+QDGEI
Subjt:  DLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEI

Query:  LSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA
        LSKYAKLVWELHHDQQKAL+YFQRALQASPHDS+VQAAYANFLWETEEDEDEHSLGK MATQTY AAAT+
Subjt:  LSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

TrEMBL top hitse value%identityAlignment
A0A061DPH6 Tetratricopeptide repeat-like superfamily protein, putative isoform 15.0e-6145.9Show/hide
Query:  MLLKSSSTPLLGSLL-----PPDHHHHHHDAVGKHSSPSPS--PSPSPFAFHSKNKTLSFSTTASLHSSP-------SFSDHHHTTPTGFRRTHSDGNLN
        MLL+SSSTPLLGSLL      P +++H+  +      PS S   + +  +FH    +L  STT S  SSP        FSD       GFRR  S+GNL 
Subjt:  MLLKSSSTPLLGSLL-----PPDHHHHHHDAVGKHSSPSPS--PSPSPFAFHSKNKTLSFSTTASLHSSP-------SFSDHHHTTPTGFRRTHSDGNLN

Query:  TLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDL------------------GNFGIDNRF
         L HA+   N        D +N      L    +R +LQTIPSFSFY S AR EE++D+    +DLE +E++L                  GN    N F
Subjt:  TLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDL------------------GNFGIDNRF

Query:  RMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGL--------GIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLS
        RM+   ++  EV+        ED G   G VG+   +M+LARGL        G+ G  GGGGGG    +G  G G   HG+EE+Y++MV ENPGN L L 
Subjt:  RMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGL--------GIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLS

Query:  NYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDE
        NYA+FLYQ+       K+DL  AEEYYSRAIL D +DGE LS+YAKLVWELHHDQ++A SYF+RA+QASP DSHV AAYA+FLWETEEDE
Subjt:  NYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDE

A0A061DWD9 Tetratricopeptide repeat-like superfamily protein, putative isoform 25.0e-6145.9Show/hide
Query:  MLLKSSSTPLLGSLL-----PPDHHHHHHDAVGKHSSPSPS--PSPSPFAFHSKNKTLSFSTTASLHSSP-------SFSDHHHTTPTGFRRTHSDGNLN
        MLL+SSSTPLLGSLL      P +++H+  +      PS S   + +  +FH    +L  STT S  SSP        FSD       GFRR  S+GNL 
Subjt:  MLLKSSSTPLLGSLL-----PPDHHHHHHDAVGKHSSPSPS--PSPSPFAFHSKNKTLSFSTTASLHSSP-------SFSDHHHTTPTGFRRTHSDGNLN

Query:  TLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDL------------------GNFGIDNRF
         L HA+   N        D +N      L    +R +LQTIPSFSFY S AR EE++D+    +DLE +E++L                  GN    N F
Subjt:  TLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDL------------------GNFGIDNRF

Query:  RMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGL--------GIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLS
        RM+   ++  EV+        ED G   G VG+   +M+LARGL        G+ G  GGGGGG    +G  G G   HG+EE+Y++MV ENPGN L L 
Subjt:  RMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGL--------GIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLS

Query:  NYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDE
        NYA+FLYQ+       K+DL  AEEYYSRAIL D +DGE LS+YAKLVWELHHDQ++A SYF+RA+QASP DSHV AAYA+FLWETEEDE
Subjt:  NYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDE

A0A0A0KA70 TPR_REGION domain-containing protein2.0e-11873.67Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVH
        MLLKSSSTPLLGSLLPPD  HHHHD  GKH       SPS F FH  NK LSFS TTASL SSP+FSDHH    P+GFRRT+S+GNLNT+SHASDVI+VH
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVH

Query:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRMG
        EDPFSFDS NFKSS   CH LKRSILQTIPSFSFYGSRAR EE+++++D+  D + +ED LGNF ID       AA+VTPEVRAMEQAW+R  A GD MG
Subjt:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRMG

Query:  FVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQ
        FVGDL+KEMYLARGLGIGG  G GGGGGR    GG GGGGE++GMEEYYKKMVVENP NALVLSNYAEFLYQ       +K DL  AEEYYSRAILMDS 
Subjt:  FVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQ

Query:  DGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSH
        DGE LSKYAKLVWELHHDQQKALSYFQRALQASP D +
Subjt:  DGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSH

A0A1S3CCM7 uncharacterized protein LOC1034989232.4e-14075.47Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH
        MLLKSSSTPLLGSLLPPDHHHHH+D VGKH       SPS F FH  NK LSFS TTASL+SSPSFSDHH    P+GFRRT+S+GNLNT+SHAS+VI+VH
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH

Query:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM
        EDPFS DS NFKSSN     LKRS+LQTIPSFSFYGSR R EED ++++D+  D E +EDDLGNFGI+       AAV+TPEVRAMEQAW+R  A GD +
Subjt:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM

Query:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDS
        GFVGDL+KEMYLARGLGIGG  G GGGGGR  + GG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+       +K DLR AEEYYSRAILMDS
Subjt:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDS

Query:  QDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA
        QDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GK  AT+TY AAATA
Subjt:  QDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

A0A5A7TE10 TPR_11 domain-containing protein1.7e-14176.33Show/hide
Query:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH
        MLLKSSSTPLLGSLLPPDHHHHH+D VGKH       SPS F FH  NK LSFS TTASL+SSPSFSDHH    P+GFRRT+S+GNLNT+SHAS+VI+VH
Subjt:  MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFS-TTASLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVH

Query:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM
        EDPFS DS NFKSSN     LKRSILQTIPSFSFYGSR R EED ++++D+  D E +EDDLGNFGI+       AAV+TPEVRAMEQAW+R  A GD M
Subjt:  EDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEED-DDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDA-GDRM

Query:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQAS-SNIVSKKRDLRGAEEYYSRAILMD
        GF GDL+KEMYLARGLGIGG  G GGGGGR  S GG GGGGE++GMEEYYKKMVVENPGNALVLSNYAEFLY+AS S ++  K DL  AEEYYSRAILMD
Subjt:  GFVGDLQKEMYLARGLGIGGSDG-GGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQAS-SNIVSKKRDLRGAEEYYSRAILMD

Query:  SQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA
        SQDGEILSKYAKLVWELHHDQQKA+SYFQRALQASPHDSHVQAAYANFLWETEE+EDE S+GK  AT+TY AAATA
Subjt:  SQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.2e-2044.22Show/hide
Query:  MYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYA
        M+LA GLGI   D  G             G +     +YYK M+ E P + L+L NYA+FL          K DL GAEEYY +  +++  DG  L+ Y 
Subjt:  MYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYA

Query:  KLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
        +LV +LH D+ KA+SYF+RA+QASP DS V AAYA+FLWE   D+D+
Subjt:  KLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.0e-2540.56Show/hide
Query:  MEQAWTREDAGDRMGFVGDLQKEMYLARGLGIGGSDG---GGGGGRRWSSGGSG--GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKK
        +E+ ++    GD+     D  + +    G G+GGS G    GGGG     GGSG  GG  +   + YY++M+  NPGN+L+  NYA+FL +        K
Subjt:  MEQAWTREDAGDRMGFVGDLQKEMYLARGLGIGGSDG---GGGGGRRWSSGGSG--GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKK

Query:  RDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGK
         D++ AEEY  RAIL ++ DG +LS YA L+   H D+Q+A SY+++A++ SP D +VQA+YA FLW+ +EDE++ +LG+
Subjt:  RDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGK

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.2e-2642.48Show/hide
Query:  GDLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGE
        G L  E     G G+GG  G  GG   + +GG GG  ++  + +YY++M+  NP N+L+L NY +FLY+        ++D  GAEEYY RAIL +  DGE
Subjt:  GDLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGE

Query:  ILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
         LS Y +L+WE   D+++A  YF +A+ ASP+D  V  +YA F+WE E+D+D+
Subjt:  ILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-2245.65Show/hide
Query:  GSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDS-QDGEILSKYAKLVWELHHD
        G   GG GGR     G GGGG    ++ YY++M+   PG+ L+LSNYA FL +        K D R AEEY  RA+L +S +DGE+LS Y  L+W+ H D
Subjt:  GSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDS-QDGEILSKYAKLVWELHHD

Query:  QQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
          +A SY+ +A+Q+SP D +V A+YA FLW+ EE+ +E
Subjt:  QQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.7e-2541.62Show/hide
Query:  EDAGDRMGFVGDLQKEMY------LARGLGIGGSDGGG---GGGRRWSSGGS-GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRD
        ED  + +GF G ++   Y      L     + G  GGG   GGG+  S G S GG G     + +Y+KM+  NPGN + LSNYA+FL +        ++D
Subjt:  EDAGDRMGFVGDLQKEMY------LARGLGIGGSDGGG---GGGRRWSSGGS-GGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRD

Query:  LRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE
           AEEY  RAIL+   DG +L+ YA+LVW++H D  +A +YF +A+ A+P D +VQA+YA FLW+ EE+E+E
Subjt:  LRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCGCCGGACCACCACCACCACCACCACGACGCCGTCGGAAAACACTCCTCCCCTTCCCCTTCCCC
TTCCCCTTCCCCCTTCGCCTTCCACTCCAAAAATAAAACGCTTTCTTTCTCCACCACTGCTTCTCTTCACTCCTCGCCTTCTTTCTCCGATCACCACCACACCACTCCCA
CTGGCTTCCGGAGAACCCACTCCGATGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCAATGTCCATGAAGATCCCTTCTCCTTTGATTCCTTCAATTTCAAA
TCCTCTAATAACCTCTGCCATAGCCTCAAACGCTCAATTCTCCAGACTATACCCTCGTTTTCCTTCTATGGTTCTAGAGCCAGGATTGAAGAAGATGATGACGATGATGA
TCAACATACTGATCTAGAGGTGGATGAAGATGACTTGGGGAATTTTGGCATTGACAACAGGTTCAGGATGGACGCTGCTGCCGTTGTAACTCCCGAGGTTAGGGCCATGG
AACAAGCTTGGACTAGAGAAGATGCTGGTGATAGGATGGGTTTTGTGGGTGATTTACAGAAAGAGATGTATCTGGCTAGAGGGCTCGGCATCGGAGGATCGGATGGTGGC
GGCGGTGGTGGTCGACGGTGGAGTAGTGGCGGCAGCGGTGGTGGAGGTGAGCAACATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTTT
GGTTTTAAGTAACTATGCGGAGTTCTTATACCAGGCAAGTTCTAACATTGTTTCCAAGAAAAGAGACCTGCGAGGAGCTGAAGAGTATTACAGTAGAGCCATTTTGATGG
ATTCCCAAGATGGAGAAATTCTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCA
CATGACAGCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGATGAACACAGCTTAGGAAAAGTGATGGCAACACAGACTTACAAAGCAGC
TGCAACTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCGCCGGACCACCACCACCACCACCACGACGCCGTCGGAAAACACTCCTCCCCTTCCCCTTCCCC
TTCCCCTTCCCCCTTCGCCTTCCACTCCAAAAATAAAACGCTTTCTTTCTCCACCACTGCTTCTCTTCACTCCTCGCCTTCTTTCTCCGATCACCACCACACCACTCCCA
CTGGCTTCCGGAGAACCCACTCCGATGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCAATGTCCATGAAGATCCCTTCTCCTTTGATTCCTTCAATTTCAAA
TCCTCTAATAACCTCTGCCATAGCCTCAAACGCTCAATTCTCCAGACTATACCCTCGTTTTCCTTCTATGGTTCTAGAGCCAGGATTGAAGAAGATGATGACGATGATGA
TCAACATACTGATCTAGAGGTGGATGAAGATGACTTGGGGAATTTTGGCATTGACAACAGGTTCAGGATGGACGCTGCTGCCGTTGTAACTCCCGAGGTTAGGGCCATGG
AACAAGCTTGGACTAGAGAAGATGCTGGTGATAGGATGGGTTTTGTGGGTGATTTACAGAAAGAGATGTATCTGGCTAGAGGGCTCGGCATCGGAGGATCGGATGGTGGC
GGCGGTGGTGGTCGACGGTGGAGTAGTGGCGGCAGCGGTGGTGGAGGTGAGCAACATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTTT
GGTTTTAAGTAACTATGCGGAGTTCTTATACCAGGCAAGTTCTAACATTGTTTCCAAGAAAAGAGACCTGCGAGGAGCTGAAGAGTATTACAGTAGAGCCATTTTGATGG
ATTCCCAAGATGGAGAAATTCTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCA
CATGACAGCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGATGAACACAGCTTAGGAAAAGTGATGGCAACACAGACTTACAAAGCAGC
TGCAACTGCTTGA
Protein sequenceShow/hide protein sequence
MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFSTTASLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFK
SSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIGGSDGG
GGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASP
HDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA