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Clc06G02270 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G02270
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:2174647..2175798
RNA-Seq ExpressionClc06G02270
SyntenyClc06G02270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039815.1 hypothetical protein E6C27_scaffold122G00900 [Cucumis melo var. makuwa]6.5e-3472.8Show/hide
Query:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSM--TTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV
        MEKNQKRKGF+RRLYRAAR AGKAKVKQ+NPP  STS +S  G DSFA SSE  SASNP RS+   TVQKQASS H           GAYGG GGGDENV
Subjt:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSM--TTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV

Query:  DAKAATYILLVRERLKMERSMDRKV
        D KAATYILLV+ERLKMERSMDR+V
Subjt:  DAKAATYILLVRERLKMERSMDRKV

KAG6592959.1 hypothetical protein SDJN03_12435, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2365.81Show/hide
Query:  MRRLYRAARYAGKAKV--KQSNPPAA---STSLHSDGGDDSFALSSEMRSASNPKRSMTTV---QKQASSVHGGFRDGISEMRGAYGGCGGGDENVDAKA
        MRRLYRAAR AGKAK   KQSNPPA+   +T     GG   F   SEMRS S P +S       QKQASS HGGFRDG  EMRG YGG  GGDENVD KA
Subjt:  MRRLYRAARYAGKAKV--KQSNPPAA---STSLHSDGGDDSFALSSEMRSASNPKRSMTTV---QKQASSVHGGFRDGISEMRGAYGGCGGGDENVDAKA

Query:  ATYILLVRERLKMERSM
         TYIL VRERLKMERSM
Subjt:  ATYILLVRERLKMERSM

KGN46459.1 hypothetical protein Csa_005040 [Cucumis sativus]1.5e-3372Show/hide
Query:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKR--SMTTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV
        ME  QKRKGF+RRLYRAAR AGKAKVKQSNPP  STS +S  GDD FA SSE +SASNP R  + TTVQKQASS H           GAYGG GGGDENV
Subjt:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKR--SMTTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV

Query:  DAKAATYILLVRERLKMERSMDRKV
        D KAATYILLV+ERLKMERSMDR+V
Subjt:  DAKAATYILLVRERLKMERSMDRKV

RWR80007.1 hypothetical protein CKAN_00861200 [Cinnamomum micranthum f. kanehirae]1.9e-0434.59Show/hide
Query:  MEKNQKRKGFMR-----RLYRAARYAG----KAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSMTTVQKQASSVHGGFRDGISEMRGAYGGC
        ME N+KR+GFM+       YRA++        +K+KQS  PA++ S+     +  FA+S      S+P +    V       +  F   +    GA G  
Subjt:  MEKNQKRKGFMR-----RLYRAARYAG----KAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSMTTVQKQASSVHGGFRDGISEMRGAYGGC

Query:  GGGDENVDAKAATYILLVRERLKMERSMDRKVE
          GDE+VD +AATYI  V+ER ++ERS  RK +
Subjt:  GGGDENVDAKAATYILLVRERLKMERSMDRKVE

TrEMBL top hitse value%identityAlignment
A0A0A0KCA4 Uncharacterized protein7.0e-3472Show/hide
Query:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKR--SMTTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV
        ME  QKRKGF+RRLYRAAR AGKAKVKQSNPP  STS +S  GDD FA SSE +SASNP R  + TTVQKQASS H           GAYGG GGGDENV
Subjt:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKR--SMTTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV

Query:  DAKAATYILLVRERLKMERSMDRKV
        D KAATYILLV+ERLKMERSMDR+V
Subjt:  DAKAATYILLVRERLKMERSMDRKV

A0A443NNB4 Uncharacterized protein9.0e-0534.59Show/hide
Query:  MEKNQKRKGFMR-----RLYRAARYAG----KAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSMTTVQKQASSVHGGFRDGISEMRGAYGGC
        ME N+KR+GFM+       YRA++        +K+KQS  PA++ S+     +  FA+S      S+P +    V       +  F   +    GA G  
Subjt:  MEKNQKRKGFMR-----RLYRAARYAG----KAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSMTTVQKQASSVHGGFRDGISEMRGAYGGC

Query:  GGGDENVDAKAATYILLVRERLKMERSMDRKVE
          GDE+VD +AATYI  V+ER ++ERS  RK +
Subjt:  GGGDENVDAKAATYILLVRERLKMERSMDRKVE

A0A5A7TED2 Uncharacterized protein3.2e-3472.8Show/hide
Query:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSM--TTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV
        MEKNQKRKGF+RRLYRAAR AGKAKVKQ+NPP  STS +S  G DSFA SSE  SASNP RS+   TVQKQASS H           GAYGG GGGDENV
Subjt:  MEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSM--TTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENV

Query:  DAKAATYILLVRERLKMERSMDRKV
        D KAATYILLV+ERLKMERSMDR+V
Subjt:  DAKAATYILLVRERLKMERSMDRKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCGGAGCAAATGGAGAAAAACCAGAAGCGGAAAGGCTTCATGAGGCGACTATATCGAGCCGCAAGATACGCCGGCAAGGCCAAAGTGAAGCAAAGCAACCCCCC
GGCGGCGTCTACATCGCTACATAGCGACGGCGGCGACGACTCTTTTGCGTTGTCGAGCGAGATGAGATCTGCAAGTAATCCGAAAAGATCCATGACGACAGTGCAGAAGC
AGGCCTCATCGGTGCATGGCGGATTTCGCGACGGAATCAGTGAAATGCGGGGAGCATACGGTGGTTGTGGCGGTGGTGACGAGAATGTTGACGCAAAGGCAGCGACGTAC
ATTTTGTTGGTAAGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTTGAAGCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCGGAGCAAATGGAGAAAAACCAGAAGCGGAAAGGCTTCATGAGGCGACTATATCGAGCCGCAAGATACGCCGGCAAGGCCAAAGTGAAGCAAAGCAACCCCCC
GGCGGCGTCTACATCGCTACATAGCGACGGCGGCGACGACTCTTTTGCGTTGTCGAGCGAGATGAGATCTGCAAGTAATCCGAAAAGATCCATGACGACAGTGCAGAAGC
AGGCCTCATCGGTGCATGGCGGATTTCGCGACGGAATCAGTGAAATGCGGGGAGCATACGGTGGTTGTGGCGGTGGTGACGAGAATGTTGACGCAAAGGCAGCGACGTAC
ATTTTGTTGGTAAGAGAGCGTTTGAAGATGGAGAGGTCCATGGATCGAAAAGTTGAAGCAAATTGA
Protein sequenceShow/hide protein sequence
MGSEQMEKNQKRKGFMRRLYRAARYAGKAKVKQSNPPAASTSLHSDGGDDSFALSSEMRSASNPKRSMTTVQKQASSVHGGFRDGISEMRGAYGGCGGGDENVDAKAATY
ILLVRERLKMERSMDRKVEAN