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Clc06G02600 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G02600
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationClcChr06:2549161..2553489
RNA-Seq ExpressionClc06G02600
SyntenyClc06G02600
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0010223 - secondary shoot formation (biological process)
GO:0016121 - carotene catabolic process (biological process)
GO:1901601 - strigolactone biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456958.1 PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]1.8e-2477.03Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KKMIA+FLMCIVVVAALQF++AN E++V KYEAKF+AKYKSC++TCEKECL  G+GQS+CEVKCDEDC+EK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
XP_038891517.1 major pollen allergen Ole e 6-like [Benincasa hispida]1.1e-2481.08Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KKM+A+FLMCIVVVAALQF+TAN E++V KYEAKF+AKYKSCY+TCEKECL  G+GQSFCEVKCDEDCDEK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
XP_038906482.1 major pollen allergen Ole e 6-like [Benincasa hispida]4.8e-2582.43Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KK+IAMFLMCIVV+ ALQF TAN  E+VDKYEAKFEAKYKSCY+TCEKECL   NGQSFCEVKCDEDCDEK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
XP_038906677.1 major pollen allergen Ole e 6-like [Benincasa hispida]8.2e-2581.08Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KK+IA+F MCIVV+AA QF+TAN  E+V+KYEAKFEAKYKSCY+TCEKECL  GNGQSFCEVKCDEDCDEK+TA
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
XP_038906682.1 major pollen allergen Ole e 6-like [Benincasa hispida]1.7e-2583.78Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KKMIA+FLMCIVV+AALQF+TAN  E+V KYEAKF+AKYKSCY+TCEKECL  GNGQSFCEVKCDEDCDEK+TA
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
TrEMBL top hitse value%identityAlignment
A0A0A0KCI6 Uncharacterized protein1.3e-2371.79Show/hide
Query:  MGKKKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSFCEVKCDEDCDEKQTA
        M KKKM+ + L+CIVV+AAL+FS  NGEEK DKYE+KF+AKYK+CY++CEKECL  G NGQSFCEVKCDEDC EK++A
Subjt:  MGKKKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSFCEVKCDEDCDEKQTA
A0A1S3C530 major pollen allergen Ole e 6-like8.9e-2577.03Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KKMIA+FLMCIVVVAALQF++AN E++V KYEAKF+AKYKSC++TCEKECL  G+GQS+CEVKCDEDC+EK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
A0A1S4E2K0 carotenoid cleavage dioxygenase 7, chloroplastic isoform X15.7e-2476Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSFCEVKCDEDCDEKQTA
        KKM+ + L+CIVV+AAL+FS ANGEEK DKYE+KF+AKYKSCY++CEKECL  G NGQSFCEVKCDEDCDEK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSFCEVKCDEDCDEKQTA
A0A5D3BCS2 Major pollen allergen Ole e 6-like8.9e-2577.03Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
        KKMIA+FLMCIVVVAALQF++AN E++V KYEAKF+AKYKSC++TCEKECL  G+GQS+CEVKCDEDC+EK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTA
A0A5D3DM52 Carotenoid cleavage dioxygenase 75.7e-2476Show/hide
Query:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSFCEVKCDEDCDEKQTA
        KKM+ + L+CIVV+AAL+FS ANGEEK DKYE+KF+AKYKSCY++CEKECL  G NGQSFCEVKCDEDCDEK+ A
Subjt:  KKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTG-NGQSFCEVKCDEDCDEKQTA
SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 62.1e-0750.94Show/hide
Query:  EAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTAAIANKEEVEKYEAK
        EA++K CY TC KEC   GNG +FCE+KCD DC  K       KE++E Y+ K
Subjt:  EAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTAAIANKEEVEKYEAK
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAGAAAATGATTGCAATGTTTCTAATGTGCATTGTGGTGGTGGCTGCTTTGCAATTTTCCACTGCCAATGGAGAGGAGAAAGTGGACAAATATGAAGCCAA
ATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAA
AACAAACTGCTGCCATTGCCAATAAGGAGGAGGTGGAAAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTCAAACT
GGCAATGGCCAAAGCTTTTGTGAAGTCAAATGCGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCTCTCTTCTCTTCGTCTTTCTTCTAATAACATCGATACCAT
AATGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAGAAAATGATTGCAATGTTTCTAATGTGCATTGTGGTGGTGGCTGCTTTGCAATTTTCCACTGCCAATGGAGAGGAGAAAGTGGACAAATATGAAGCCAA
ATTTGAGGCCAAATACAAATCTTGCTATCAAACTTGTGAGAAGGAATGCCTTCACACTGGTAATGGCCAAAGTTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAA
AACAAACTGCTGCCATTGCCAATAAGGAGGAGGTGGAAAAATATGAGGCCAAATTTGATGCTAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTCAAACT
GGCAATGGCCAAAGCTTTTGTGAAGTCAAATGCGATGAAGATTGTGATGAAAAACAAACTGCTGGTACTCTCTCTTCTCTTCGTCTTTCTTCTAATAACATCGATACCAT
AATGCATTAA
Protein sequenceShow/hide protein sequence
MGKKKMIAMFLMCIVVVAALQFSTANGEEKVDKYEAKFEAKYKSCYQTCEKECLHTGNGQSFCEVKCDEDCDEKQTAAIANKEEVEKYEAKFDAKYKSCYETCEKECLQT
GNGQSFCEVKCDEDCDEKQTAGTLSSLRLSSNNIDTIMH