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Clc06G02630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G02630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationClcChr06:2560329..2561314
RNA-Seq ExpressionClc06G02630
SyntenyClc06G02630
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0010223 - secondary shoot formation (biological process)
GO:0016121 - carotene catabolic process (biological process)
GO:1901601 - strigolactone biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039790.1 carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa]1.6e-2877.91Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH
        MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQSFCEVKCDEDCDEKEVADKL+I+ A+
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH

XP_016902456.1 PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 [Cucumis melo]1.6e-2877.91Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH
        MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQSFCEVKCDEDCDEKEVADKL+I+ A+
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH

XP_038875643.1 major pollen allergen Ole e 6-like [Benincasa hispida]1.6e-2881.93Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI
        MAKKMIAVF MCI+V+AALQF+TAN  E+ DKYEAKFDAKYKSCYETCEKECLE+G+GQ+FCEVKCDEDCDEKE ADKL I +
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI

XP_038891517.1 major pollen allergen Ole e 6-like [Benincasa hispida]7.0e-2983.13Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI
        MAKKM+AVFLMCI+VVAALQF+TAN E++  KYEAKFDAKYKSCYETCEKECL +G+GQSFCEVKCDEDCDEKEVADKL I +
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI

XP_038906682.1 major pollen allergen Ole e 6-like [Benincasa hispida]4.8e-3084.71Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINIAH
        MAKKMIAVFLMCI+V+AALQF+TAN  E+  KYEAKFDAKYKSCYETCEKECLE GNGQSFCEVKCDEDCDEKE ADKL I  AH
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINIAH

TrEMBL top hitse value%identityAlignment
A0A0A0KFH6 Uncharacterized protein5.4e-2772.62Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINI
        MAKKM+ V L+CI+++A L+FS  N EEKEDKYE+KFDA+YKSCYE+CEKECL +G NGQS+CEVKCDEDCDEKEVADKL + +
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINI

A0A1S3C530 major pollen allergen Ole e 6-like9.9e-2978.31Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI
        MAKKMIA+FLMCI+VVAALQF++AN E++  KYEAKFDAKYKSC++TCEKECLE+G+GQS+CEVKCDEDC+EKEVADKL I +
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI

A0A1S4E2K0 carotenoid cleavage dioxygenase 7, chloroplastic isoform X17.5e-2977.91Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH
        MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQSFCEVKCDEDCDEKEVADKL+I+ A+
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH

A0A5D3BCS2 Major pollen allergen Ole e 6-like9.9e-2978.31Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI
        MAKKMIA+FLMCI+VVAALQF++AN E++  KYEAKFDAKYKSC++TCEKECLE+G+GQS+CEVKCDEDC+EKEVADKL I +
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINI

A0A5D3DM52 Carotenoid cleavage dioxygenase 77.5e-2977.91Show/hide
Query:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH
        MAKKM+ V L+CI+V+AAL+FS AN EEK+DKYE+KFDAKYKSCYE+CEKECL++G NGQSFCEVKCDEDCDEKEVADKL+I+ A+
Subjt:  MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESG-NGQSFCEVKCDEDCDEKEVADKLQINIAH

SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 64.9e-0955.81Show/hide
Query:  DAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQ
        +A++K CY+TC KEC + GNG +FCE+KCD DC  K+V +KL+
Subjt:  DAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQ

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTGCATTTTGGTGGTGGCTGCTTTGCAGTTTTCCACTGCCAATGCAGAGGAAAAGGAGGACAAATATGAGGCCAAATT
TGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGACAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGG
AAGTTGCTGATAAGCTCCAGATCAACATAGCACATTGA
mRNA sequenceShow/hide mRNA sequence
ACTGTAAAAAGGCACAATTCAAAGCTTAAGACAACAAAAAATTAAAGAGGAAATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTGCATTTTGGTGGTGGCTGCTTTGC
AGTTTTCCACTGCCAATGCAGAGGAAAAGGAGGACAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGC
AATGGACAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGATAAGCTCCAGATCAACATAGCACATTGAGCAATGGAGGATAAAAGAAA
ATAAGTGCCCTTGAGAAAATTTATCAGATTTATGTCAACAATTCTTACCATGTATTAGTATATTGAAATAATGTAGTTTGAGAGGGAGTTGATAAAGTTCCCTTTTTCCC
TTTTTTTCTCTTTAATGAACTTTTTCCTCTTTCTTTTATAATAATGTGATTGAATATTTCAATTTTATAAAGTTCTAATGGGATTGTGAATGAACCATTTTTCACCATTA
TGTATTTATTATACAACAAAGATT
Protein sequenceShow/hide protein sequence
MAKKMIAVFLMCILVVAALQFSTANAEEKEDKYEAKFDAKYKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLQINIAH