; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G02880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G02880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding KH domain-containing protein
Genome locationClcChr06:2862312..2871964
RNA-Seq ExpressionClc06G02880
SyntenyClc06G02880
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039772.1 RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo var. makuwa]1.4e-16192.08Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENS+TDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

XP_008459768.1 PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Cucumis melo]1.4e-16192.08Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENS+TDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

XP_011656837.1 RNA-binding KH domain-containing protein PEPPER [Cucumis sativus]1.8e-16191.79Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASD+SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENS+TDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

XP_022959402.1 flowering locus K homology domain-like [Cucurbita moschata]2.5e-15890.03Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDD IV NSEA DVSAPKRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKD ENS+TDAEKALQ IAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGD+PAVLKALEEIGNQLRVNPPRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

XP_038875599.1 flowering locus K homology domain-like isoform X1 [Benincasa hispida]4.0e-16492.38Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPS+P MAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDN+NS+TDAEKALQQIAALILKEDGTS+EELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

TrEMBL top hitse value%identityAlignment
A0A0A0KCF8 Uncharacterized protein8.9e-16291.79Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASD+SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENS+TDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

A0A1S3CB11 RNA-binding KH domain-containing protein PEPPER-like6.8e-16292.08Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENS+TDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

A0A5A7T8H9 RNA-binding KH domain-containing protein PEPPER-like6.8e-16292.08Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDD IV NS+ASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKDNENS+TDAEKALQQIAALILKEDG+SIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGDI AVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

A0A6J1H4F3 flowering locus K homology domain-like1.2e-15890.03Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVS+ GHTVTGKRRREDD IV NSEA DVSAPKRQAKAHDVLFRI+VPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKD ENS+TDAEKALQ IAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGA+ITILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGD+PAVLKALEEIGNQLRVNPPRQVISVSPTYNYN MHPPQSY+DPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

A0A6J1KTT5 poly(RC)-binding protein 4-like isoform X16.0e-15889.15Show/hide
Query:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
        MQ GDIP+YPSMPA APLPVSMPLPGT+LVS+PGH VTGKRRREDDPIVP SEA DV APKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA
Subjt:  MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKA

Query:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP
        TIKIADAVARYEERVIIISSKD EN++TDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGAS+TILAP
Subjt:  TIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP

Query:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
        NQLPLCASAHESDRVVQISGD+PAVLKALEEIGNQLRVNPPRQVISVSPTYNYN +HPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES
Subjt:  NQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNES

Query:  GATIK---------------------VALAKQRVDEYIYSQ
        GATIK                     VALAKQRVDEYIYSQ
Subjt:  GATIK---------------------VALAKQRVDEYIYSQ

SwissProt top hitse value%identityAlignment
F4KDN0 KH domain-containing protein HEN43.5e-1432.75Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL
        DV+F+I+  ++  G VIG  G  ++ +  ET A I + + +   EER+I +++ +N E   + A+KA+  I + + +     I    +  G  ++ T RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR
        ++  SQ G ++G  G  + ++R ++GA+I IL   Q P C S  E+D+VVQI+G+ P V +A+  I ++LR
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR

P57722 Poly(rC)-binding protein 34.0e-1024.49Show/hide
Query:  PIVPNSEASDVS-------APKRQAKAHD------VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSITDAEKA
        PI+P+S    +S         K ++K  +      +  R+++  K++G +IGK G  ++K+REE+ A I I++      ER++ I+        TDA   
Subjt:  PIVPNSEASDVS-------APKRQAKAHD------VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSITDAEKA

Query:  LQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIG
           + A   +ED  +       T      T+RL++  SQ GSLIG  G  I+++R S+GA + + A + LP     + ++R V ISG   A+++ +++I 
Subjt:  LQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIG

Query:  NQLRVNPPR-----------------------------------QVISVSPTYNYNTMHPPQSYMDP--------------------------TSVNYVT
          +  +PP+                                   Q+  +       T  PP    +P                           S    T
Subjt:  NQLRVNPPR-----------------------------------QVISVSPTYNYNTMHPPQSYMDP--------------------------TSVNYVT

Query:  FEMLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDE
         E+ I   L+G +IG  G  I+ IR  SGA IK+A A +   E
Subjt:  FEMLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDE

P58223 KH domain-containing protein At4g183758.1e-1130.77Show/hide
Query:  VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII------------SSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGT
        V++RI+ P   +G VIGK G  I  +R  TKA IK+ D +    +RVI I             +K     +  A+ AL ++   I+  D  +    K   
Subjt:  VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII------------SSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGT

Query:  GHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPN-QLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPT
                RLL+  SQ+ SLIG +G+NI+++R  + AS+ +++ +   P    A E D VV ISG+  +V +AL  +   +    PR+ I +  T
Subjt:  GHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPN-QLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPRQVISVSPT

Q9SR13 Flowering locus K homology domain1.4e-1531.55Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL
        + +FR++VP++++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+S+  +   L ++   I+  DG   E  +       +   RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------VNPPRQVISVSPTYNYNTMHPP
        L+  SQAGSLIG  G  ++ ++ +S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR       + P  +     PT   + M PP
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR-------VNPPRQVISVSPTYNYNTMHPP

Query:  QSYMDP
             P
Subjt:  QSYMDP

Q9SZH4 RNA-binding KH domain-containing protein PEPPER3.8e-1632.16Show/hide
Query:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRL
        D +FR++VP  ++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+   +      A+  +  +  +  G    ++  V       +++RL
Subjt:  DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSITDAEKALQQIAALILKEDG-TSIEELKVGTGHVAANTIRL

Query:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR
        L+A +QA +LIG  G  I+ +  +SGAS+ IL+  + P  A+  + +R+V + G+   +LKALE I   LR
Subjt:  LIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLR

Arabidopsis top hitse value%identityAlignment
AT1G14170.1 RNA-binding KH domain-containing protein7.5e-2029.18Show/hide
Query:  AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSITDAEKALQQIAALIL----KEDGTSIEELK
        + D ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          +  A  AL ++  +++    ++DGT  +   
Subjt:  AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSITDAEKALQQIAALIL----KEDGTSIEELK

Query:  VGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPR-QVISVSPTYN
           G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  NP R Q + +S   +
Subjt:  VGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPR-QVISVSPTYN

Query:  YNTMHPPQSYMDPTSV-----NYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI
         ++MH P + +   ++     NY                +     VGG+IG GG  I++IR E+GATI+V  ++   D+ I
Subjt:  YNTMHPPQSYMDPTSV-----NYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI

AT1G14170.2 RNA-binding KH domain-containing protein1.2e-2029.64Show/hide
Query:  HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSITDAEKALQQIAALIL----KEDGTSIEELKV
        HD ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          +  A  AL ++  +++    ++DGT  +    
Subjt:  HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSITDAEKALQQIAALIL----KEDGTSIEELKV

Query:  GTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPR-QVISVSPTYNY
          G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  NP R Q + +S   + 
Subjt:  GTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPR-QVISVSPTYNY

Query:  NTMHPPQSYMDPTSV-----NYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI
        ++MH P + +   ++     NY                +     VGG+IG GG  I++IR E+GATI+V  ++   D+ I
Subjt:  NTMHPPQSYMDPTSV-----NYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI

AT1G14170.3 RNA-binding KH domain-containing protein7.5e-2029.18Show/hide
Query:  AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSITDAEKALQQIAALIL----KEDGTSIEELK
        + D ++R + P K+ G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E          +  A  AL ++  +++    ++DGT  +   
Subjt:  AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NSITDAEKALQQIAALIL----KEDGTSIEELK

Query:  VGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPR-QVISVSPTYN
           G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  NP R Q + +S   +
Subjt:  VGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDIPAVLKALEEIGNQLRVNPPR-QVISVSPTYN

Query:  YNTMHPPQSYMDPTSV-----NYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI
         ++MH P + +   ++     NY                +     VGG+IG GG  I++IR E+GATI+V  ++   D+ I
Subjt:  YNTMHPPQSYMDPTSV-----NYVTFE-----------MLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYI

AT5G15270.1 RNA-binding KH domain-containing protein1.6e-2229.75Show/hide
Query:  PGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK
        P H  + ++R       P S+  D    KR+ +            D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  
Subjt:  PGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK

Query:  DNENSITDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR
        D  N+  D EK       AL +I   ++ +D  S E+   G   V   T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD 
Subjt:  DNENSITDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR

Query:  VVQISGDIPAVLKALEEIGNQLRVNPPR--QVISVSPTYNYNTM-------------------------------HPPQSYMDPTSVNYVTFEMLISET-
        ++QISG++  V KAL +I ++L  NP R   ++S S  Y   ++                                PP++  DP +  +  F  L+S   
Subjt:  VVQISGDIPAVLKALEEIGNQLRVNPPR--QVISVSPTYNYNTM-------------------------------HPPQSYMDPTSVNYVTFEMLISET-

Query:  LVGGLIGIGGFNISRIRNESGATIKV
         +  +IG GG  I+++R E+ ATIKV
Subjt:  LVGGLIGIGGFNISRIRNESGATIKV

AT5G15270.2 RNA-binding KH domain-containing protein1.6e-2229.75Show/hide
Query:  PGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK
        P H  + ++R       P S+  D    KR+ +            D +FR + P K+IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S  
Subjt:  PGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKA----------HDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSK

Query:  DNENSITDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR
        D  N+  D EK       AL +I   ++ +D  S E+   G   V   T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD 
Subjt:  DNENSITDAEK-------ALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDR

Query:  VVQISGDIPAVLKALEEIGNQLRVNPPR--QVISVSPTYNYNTM-------------------------------HPPQSYMDPTSVNYVTFEMLISET-
        ++QISG++  V KAL +I ++L  NP R   ++S S  Y   ++                                PP++  DP +  +  F  L+S   
Subjt:  VVQISGDIPAVLKALEEIGNQLRVNPPR--QVISVSPTYNYNTM-------------------------------HPPQSYMDPTSVNYVTFEMLISET-

Query:  LVGGLIGIGGFNISRIRNESGATIKV
         +  +IG GG  I+++R E+ ATIKV
Subjt:  LVGGLIGIGGFNISRIRNESGATIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCTCTGCCTGTTTCTATGCCCTTACCCGGGACTTTATTGGTTTCCGAGCCCGGACATACCGT
CACCGGGAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAGGCCTCAGATGTATCGGCTCCCAAAAGACAAGCGAAGGCCCATGACGTGCTTTTCAGAATCG
TTGTGCCCTCGAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAAGATTGCGGATGCAGTCGCGCGG
TATGAAGAACGCGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGATTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTAC
GAGCATTGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTTATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATA
TTGAGAAATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACCGAGTGGTGCAAATATCAGGG
GATATTCCGGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCACCTCGGCAAGTCATTTCCGTTAGCCCAACATATAATTATAATACAATGCA
CCCGCCACAGTCATATATGGATCCAACCTCAGTTAATTATGTAACATTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGGATTGGTGGTTTCAACATAT
CAAGAATCAGAAATGAATCAGGGGCTACTATCAAGGTAGCATTGGCAAAGCAAAGGGTTGATGAATATATTTATTCTCAGAGTCGGACTGTCGAAGAGCAAGAGGAGAGG
GAGAGGCGGAGGTCGGAGACCGAGAGGAGACTGGAGAAGGAGAATCATATGGGACTGTCGGAGGACAGAGAGCGAGAGGAGGGGAGAGGTAGAGACCGAGATGAGAGGGA
GAGTCGGAGTCGGACTGTTGTCGATGTCTGTCTAAGAGGACTGAATCTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGTACATACAGTGTAGTATGCTAAAATAGTTGTATATAAAAAACTAAAACTAGCCCCTTCTCTTCTAGCTCTCCTTCCCCATCGCCTTGTGTTGATTCTCTATG
GTAATCATCAACTATCAACATTTCTCTTCTGCATTCACGTCTTCGCACTCGCAACCTGATACAGCCATCTTCAATTCCTCACTGCCGTGAAGATTCTTCCTAATATGCAA
CCAGGTGATATTCCTCTATACCCTTCCATGCCCGCCATGGCTCCTCTGCCTGTTTCTATGCCCTTACCCGGGACTTTATTGGTTTCCGAGCCCGGACATACCGTCACCGG
GAAACGCCGACGAGAGGACGACCCGATCGTTCCCAATTCGGAGGCCTCAGATGTATCGGCTCCCAAAAGACAAGCGAAGGCCCATGACGTGCTTTTCAGAATCGTTGTGC
CCTCGAAGCAGATCGGGAAGGTTATTGGTAAAGTTGGTTGCCGAATCCAGAAGGTTCGTGAGGAGACCAAAGCTACAATTAAGATTGCGGATGCAGTCGCGCGGTATGAA
GAACGCGTTATCATTATAAGTTCCAAGGACAATGAGAATTCGATTACTGATGCGGAGAAAGCACTTCAGCAAATTGCAGCACTGATATTGAAGGAAGATGGTACGAGCAT
TGAGGAACTAAAAGTTGGAACAGGGCATGTGGCTGCCAATACTATAAGGCTCCTTATAGCAGGATCTCAAGCAGGTTCCTTGATTGGTGCCTCAGGTCAAAATATTGAGA
AATTGAGGAATTCTTCTGGTGCATCAATTACGATTCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCTCATGAATCTGACCGAGTGGTGCAAATATCAGGGGATATT
CCGGCAGTTTTGAAGGCTCTTGAGGAGATAGGCAATCAGCTAAGGGTAAATCCACCTCGGCAAGTCATTTCCGTTAGCCCAACATATAATTATAATACAATGCACCCGCC
ACAGTCATATATGGATCCAACCTCAGTTAATTATGTAACATTCGAGATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATCGGGATTGGTGGTTTCAACATATCAAGAA
TCAGAAATGAATCAGGGGCTACTATCAAGGTAGCATTGGCAAAGCAAAGGGTTGATGAATATATTTATTCTCAGAGTCGGACTGTCGAAGAGCAAGAGGAGAGGGAGAGG
CGGAGGTCGGAGACCGAGAGGAGACTGGAGAAGGAGAATCATATGGGACTGTCGGAGGACAGAGAGCGAGAGGAGGGGAGAGGTAGAGACCGAGATGAGAGGGAGAGTCG
GAGTCGGACTGTTGTCGATGTCTGTCTAAGAGGACTGAATCTGAATTAA
Protein sequenceShow/hide protein sequence
MQPGDIPLYPSMPAMAPLPVSMPLPGTLLVSEPGHTVTGKRRREDDPIVPNSEASDVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVAR
YEERVIIISSKDNENSITDAEKALQQIAALILKEDGTSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISG
DIPAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQSYMDPTSVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVALAKQRVDEYIYSQSRTVEEQEER
ERRRSETERRLEKENHMGLSEDREREEGRGRDRDERESRSRTVVDVCLRGLNLN