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Clc06G03090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G03090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEF-hand domain-containing protein
Genome locationClcChr06:3235822..3237553
RNA-Seq ExpressionClc06G03090
SyntenyClc06G03090
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039753.1 EF_hand_5 domain-containing protein [Cucumis melo var. makuwa]3.7e-4180.62Show/hide
Query:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND
        MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG D
Subjt:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND

Query:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK
        SSSSED DDSEEEDE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK

XP_004140495.1 uncharacterized protein LOC101206207 [Cucumis sativus]8.8e-4383.72Show/hide
Query:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND
        MSN D+TDSE  EETPNSS+T +KKK +GSMN RN KDVPEYEKQR+SRIAENKKRMEALGLAK+ATSFLDSS +LRK D KGKRKLGEAAD+DYKPGND
Subjt:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND

Query:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK
        SSSSED DDSEE DEDFGSGKVSGSRG K
Subjt:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK

XP_016902477.1 PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo]3.7e-4180.62Show/hide
Query:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND
        MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG D
Subjt:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND

Query:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK
        SSSSED DDSEEEDE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK

XP_023547370.1 uncharacterized protein LOC111806339 isoform X1 [Cucurbita pepo subsp. pepo]5.2e-3575.41Show/hide
Query:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED
        ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSS  LRKIDRKGKRK     DEDY P  DSS+SED
Subjt:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED

Query:  DDSEEEDEDFGSGKVSGSRGMK
        DDSEE DE FGSGKVS SRGMK
Subjt:  DDSEEEDEDFGSGKVSGSRGMK

XP_023547371.1 caltractin-like isoform X2 [Cucurbita pepo subsp. pepo]5.2e-3575.41Show/hide
Query:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED
        ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSS  LRKIDRKGKRK     DEDY P  DSS+SED
Subjt:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED

Query:  DDSEEEDEDFGSGKVSGSRGMK
        DDSEE DE FGSGKVS SRGMK
Subjt:  DDSEEEDEDFGSGKVSGSRGMK

TrEMBL top hitse value%identityAlignment
A0A0A0KDV1 EF-hand domain-containing protein4.3e-4383.72Show/hide
Query:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND
        MSN D+TDSE  EETPNSS+T +KKK +GSMN RN KDVPEYEKQR+SRIAENKKRMEALGLAK+ATSFLDSS +LRK D KGKRKLGEAAD+DYKPGND
Subjt:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND

Query:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK
        SSSSED DDSEE DEDFGSGKVSGSRG K
Subjt:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK

A0A1S4E2M5 uncharacterized protein LOC1034990701.8e-4180.62Show/hide
Query:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND
        MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG D
Subjt:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND

Query:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK
        SSSSED DDSEEEDE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK

A0A5D3DMC4 EF_hand_5 domain-containing protein1.8e-4180.62Show/hide
Query:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND
        MSN D+TDSE  EETPNSS+TD+K+K + SMN R+ KDVPEYEKQR+SRI ENKKRMEALGL KLATSFLDSS +LRK DRKGKRKLGEAADEDY+PG D
Subjt:  MSNLDVTDSER-EETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGND

Query:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK
        SSSSED DDSEEEDE+FGSGK SGSRG K
Subjt:  SSSSED-DDSEEEDEDFGSGKVSGSRGMK

A0A6J1H502 caltractin-like isoform X23.3e-3575.41Show/hide
Query:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED
        ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSS  LRKIDRKGKRK     DEDY PG  SS+SED
Subjt:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED

Query:  DDSEEEDEDFGSGKVSGSRGMK
        DDSEE DE FGSGKVS SRGMK
Subjt:  DDSEEEDEDFGSGKVSGSRGMK

A0A6J1H6F0 uncharacterized protein LOC111460448 isoform X13.3e-3575.41Show/hide
Query:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED
        ++DSER+E PNSSSTD KK P+GS++  + KD PEYEKQRLSRIAEN+KRMEALGLAKLATSF+DSS  LRKIDRKGKRK     DEDY PG  SS+SED
Subjt:  VTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSED

Query:  DDSEEEDEDFGSGKVSGSRGMK
        DDSEE DE FGSGKVS SRGMK
Subjt:  DDSEEEDEDFGSGKVSGSRGMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73440.1 calmodulin-related1.1e-0641.73Show/hide
Query:  SEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPG-NDSSSSEDDD
        SERE + +SSS +  +  KG++++        YEKQRLSRIAENK R++ALG++K A + L  S   +K  R+ KR  GE  D+DY P   D    EDDD
Subjt:  SEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPG-NDSSSSEDDD

Query:  SEE---EDEDFGSGKVSGSRGMKVSLS
          E   EDE+F   + + S   K  +S
Subjt:  SEE---EDEDFGSGKVSGSRGMKVSLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCTTGACGTTACTGATTCAGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACGCAAAGAAGAAGCCCAAAGGTTCCATGAACCGCAGAAACGCCAAGGA
TGTGCCGGAGTATGAGAAACAGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCTAAATTGGCGACTTCATTTTTGGATTCCTCCATGG
ATTTGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGACGAAGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAG
GAGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGTTCTCGTGGAATGAAGGTATCACTCTCCATTTTCTGTTATATGTACTTTGACGTGGGTGGTCAAGGCCTTGCCAA
AATTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATCTTGACGTTACTGATTCAGAGCGCGAGGAAACTCCTAATTCTTCAAGCACCGACGCAAAGAAGAAGCCCAAAGGTTCCATGAACCGCAGAAACGCCAAGGA
TGTGCCGGAGTATGAGAAACAGAGGCTTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCTAAATTGGCGACTTCATTTTTGGATTCCTCCATGG
ATTTGAGGAAGATTGATAGAAAGGGGAAGCGGAAGCTGGGTGAGGCTGCCGACGAAGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGATGACTCGGAGGAG
GAGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGTTCTCGTGGAATGAAGGTATCACTCTCCATTTTCTGTTATATGTACTTTGACGTGGGTGGTCAAGGCCTTGCCAA
AATTGATAAATGA
Protein sequenceShow/hide protein sequence
MSNLDVTDSEREETPNSSSTDAKKKPKGSMNRRNAKDVPEYEKQRLSRIAENKKRMEALGLAKLATSFLDSSMDLRKIDRKGKRKLGEAADEDYKPGNDSSSSEDDDSEE
EDEDFGSGKVSGSRGMKVSLSIFCYMYFDVGGQGLAKIDK