; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G03095 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G03095
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEF-hand domain-containing protein
Genome locationClcChr06:3238877..3244025
RNA-Seq ExpressionClc06G03095
SyntenyClc06G03095
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR003903 - Ubiquitin interacting motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039753.1 EF_hand_5 domain-containing protein [Cucumis melo var. makuwa]4.9e-3177.45Show/hide
Query:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC
        +   GKNRGSETKRKVSVKKSNNFD +DDDDAL+QAI+LSL+DSGEN DAQVQGP ENVRRK +KNQE RG MKRKG    L  +RM MNEDELIMNFYC
Subjt:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC

Query:  FD
        FD
Subjt:  FD

XP_004140495.1 uncharacterized protein LOC101206207 [Cucumis sativus]3.0e-3355.49Show/hide
Query:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC
        +   GKNRGSETKRKVSVKKSNNF+ EDDDDAL+QAI+LSL+DSGENSDAQVQG  ENVRRKN+KNQE RGGMKRKG    L  +RMQMNEDELIMNFYC
Subjt:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC

Query:  FDGILYIGNILMLFIVIFTTDLVNLANRVLERGHYLMEMGSHHDKLILLESQLWYSFPRYTCPSFSFPLQLNLDDFRRLAGR
        FD     G        I   DL     RV +   +        D +               C       +LNLDDFRR+AGR
Subjt:  FDGILYIGNILMLFIVIFTTDLVNLANRVLERGHYLMEMGSHHDKLILLESQLWYSFPRYTCPSFSFPLQLNLDDFRRLAGR

XP_022959490.1 uncharacterized protein LOC111460448 isoform X1 [Cucurbita moschata]3.3e-2775.51Show/hide
Query:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD
        GKNRGS+ KRK SV+KSNN + ++DDDAL+QAI+LSL+DSGE SDAQ+QGP ENVRRKNVKNQE+ GGMKRKG    L  +RMQMNEDELIMNFYCFD
Subjt:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD

XP_022959491.1 caltractin-like isoform X2 [Cucurbita moschata]3.3e-2775.51Show/hide
Query:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD
        GKNRGS+ KRK SV+KSNN + ++DDDAL+QAI+LSL+DSGE SDAQ+QGP ENVRRKNVKNQE+ GGMKRKG    L  +RMQMNEDELIMNFYCFD
Subjt:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD

XP_038874842.1 centrin-1-like [Benincasa hispida]4.9e-3182.83Show/hide
Query:  GKNRGSETKRKVSVKKSNNFDGEDDD-DALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD
        GKNRGSE KRKV VKKSNN D EDDD DALRQAI+LSL+DSGEN DAQVQGP ENVRRKNVKNQEVRGGMKRKG    L  +RMQMN+DELIMNFYCFD
Subjt:  GKNRGSETKRKVSVKKSNNFDGEDDD-DALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD

TrEMBL top hitse value%identityAlignment
A0A0A0KDV1 EF-hand domain-containing protein1.5e-3355.49Show/hide
Query:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC
        +   GKNRGSETKRKVSVKKSNNF+ EDDDDAL+QAI+LSL+DSGENSDAQVQG  ENVRRKN+KNQE RGGMKRKG    L  +RMQMNEDELIMNFYC
Subjt:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC

Query:  FDGILYIGNILMLFIVIFTTDLVNLANRVLERGHYLMEMGSHHDKLILLESQLWYSFPRYTCPSFSFPLQLNLDDFRRLAGR
        FD     G        I   DL     RV +   +        D +               C       +LNLDDFRR+AGR
Subjt:  FDGILYIGNILMLFIVIFTTDLVNLANRVLERGHYLMEMGSHHDKLILLESQLWYSFPRYTCPSFSFPLQLNLDDFRRLAGR

A0A5D3DMC4 EF_hand_5 domain-containing protein2.4e-3177.45Show/hide
Query:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC
        +   GKNRGSETKRKVSVKKSNNFD +DDDDAL+QAI+LSL+DSGEN DAQVQGP ENVRRK +KNQE RG MKRKG    L  +RM MNEDELIMNFYC
Subjt:  KNATGKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYC

Query:  FD
        FD
Subjt:  FD

A0A6J1H502 caltractin-like isoform X21.6e-2775.51Show/hide
Query:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD
        GKNRGS+ KRK SV+KSNN + ++DDDAL+QAI+LSL+DSGE SDAQ+QGP ENVRRKNVKNQE+ GGMKRKG    L  +RMQMNEDELIMNFYCFD
Subjt:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD

A0A6J1H6F0 uncharacterized protein LOC111460448 isoform X11.6e-2775.51Show/hide
Query:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD
        GKNRGS+ KRK SV+KSNN + ++DDDAL+QAI+LSL+DSGE SDAQ+QGP ENVRRKNVKNQE+ GGMKRKG    L  +RMQMNEDELIMNFYCFD
Subjt:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD

A0A6J1L0M5 uncharacterized protein LOC111499295 isoform X16.0e-2774.49Show/hide
Query:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD
        GKNRGS+ KRK SV+KSNN + ++DDDAL+QAI+LSL++SGE SDAQ+QGP ENVRRKNVKNQE+ GGMKRKG    L  +RMQMNEDELIMNFYCFD
Subjt:  GKNRGSETKRKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATGGGTTCGTTAATCAGCATTGGTCGACCTCGTCCAGCAGTTGGGTTATACTGTTAAGAAGGAATTTGACAGATGATAAAGCTATAAAGTGGTGTGCCCTTCT
CAATCTTCTTGAGACTATTGGACCTTCAAATCTGAGGACTCTTAAGACTTGGACCCTTTCCAAAGAGGGTTGCTTCTCAGGCACTAGAAGAAGCATGGAGTCCTCGCAAA
TATTTTTGGAATTAGTAATTGGTGGTATGGAACAAGAGCACACGGCTCAGTTTCACTTTTTAAAAGTAGAAAAAAATGCAACTGGAAAGAATAGAGGTTCAGAAACAAAA
AGAAAAGTTTCTGTCAAGAAATCAAATAACTTCGATGGTGAAGATGATGATGATGCCTTACGACAGGCAATCGAACTTTCACTACGAGATTCTGGTGAAAATTCCGATGC
ACAGGTGCAAGGTCCTAATGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATTGGTAGCTTTTTTACTCATAACTCGGA
TGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATTTTATATATTGGTAACATATTAATGCTCTTTATAGTAATTTTTACTACTGACCTGGTG
AACTTGGCCAATAGAGTCTTGGAAAGGGGGCATTACTTGATGGAGATGGGAAGCCATCATGACAAACTAATCTTGCTTGAATCCCAGCTTTGGTACTCCTTTCCGAGATA
TACCTGTCCTTCATTTTCTTTTCCCTTACAGTTAAATCTGGATGATTTCCGGAGACTTGCTGGTCGATGGAAAAGATGTATGATTGCATTTGGCAGTGTCATGAGTCCTA
GATTTGTTGGAAGTAATAAAAGAGTGAATCTGTTTTGTAGAATGGCTGTTGGAGAGAATCTCGGTAAGCTAAATGAGGGTGGGGACAAAATATCTCACCCGAGTCTAGTC
TCATCCATTTTAGGGATTTTGAGTAAGAGCACCATTTCACCATGCAAATTCACAATGTCCTCTCTAATTTCTCTAGTTTCTTCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATGGGTTCGTTAATCAGCATTGGTCGACCTCGTCCAGCAGTTGGGTTATACTGTTAAGAAGGAATTTGACAGATGATAAAGCTATAAAGTGGTGTGCCCTTCT
CAATCTTCTTGAGACTATTGGACCTTCAAATCTGAGGACTCTTAAGACTTGGACCCTTTCCAAAGAGGGTTGCTTCTCAGGCACTAGAAGAAGCATGGAGTCCTCGCAAA
TATTTTTGGAATTAGTAATTGGTGGTATGGAACAAGAGCACACGGCTCAGTTTCACTTTTTAAAAGTAGAAAAAAATGCAACTGGAAAGAATAGAGGTTCAGAAACAAAA
AGAAAAGTTTCTGTCAAGAAATCAAATAACTTCGATGGTGAAGATGATGATGATGCCTTACGACAGGCAATCGAACTTTCACTACGAGATTCTGGTGAAAATTCCGATGC
ACAGGTGCAAGGTCCTAATGAAAATGTTAGAAGGAAAAATGTGAAGAATCAGGAAGTGAGAGGAGGGATGAAGAGAAAAGGATTGGTAGCTTTTTTACTCATAACTCGGA
TGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATTTTATATATTGGTAACATATTAATGCTCTTTATAGTAATTTTTACTACTGACCTGGTG
AACTTGGCCAATAGAGTCTTGGAAAGGGGGCATTACTTGATGGAGATGGGAAGCCATCATGACAAACTAATCTTGCTTGAATCCCAGCTTTGGTACTCCTTTCCGAGATA
TACCTGTCCTTCATTTTCTTTTCCCTTACAGTTAAATCTGGATGATTTCCGGAGACTTGCTGGTCGATGGAAAAGATGTATGATTGCATTTGGCAGTGTCATGAGTCCTA
GATTTGTTGGAAGTAATAAAAGAGTGAATCTGTTTTGTAGAATGGCTGTTGGAGAGAATCTCGGTAAGCTAAATGAGGGTGGGGACAAAATATCTCACCCGAGTCTAGTC
TCATCCATTTTAGGGATTTTGAGTAAGAGCACCATTTCACCATGCAAATTCACAATGTCCTCTCTAATTTCTCTAGTTTCTTCTTTATGA
Protein sequenceShow/hide protein sequence
MKNGFVNQHWSTSSSSWVILLRRNLTDDKAIKWCALLNLLETIGPSNLRTLKTWTLSKEGCFSGTRRSMESSQIFLELVIGGMEQEHTAQFHFLKVEKNATGKNRGSETK
RKVSVKKSNNFDGEDDDDALRQAIELSLRDSGENSDAQVQGPNENVRRKNVKNQEVRGGMKRKGLVAFLLITRMQMNEDELIMNFYCFDGILYIGNILMLFIVIFTTDLV
NLANRVLERGHYLMEMGSHHDKLILLESQLWYSFPRYTCPSFSFPLQLNLDDFRRLAGRWKRCMIAFGSVMSPRFVGSNKRVNLFCRMAVGENLGKLNEGGDKISHPSLV
SSILGILSKSTISPCKFTMSSLISLVSSL