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Clc06G03105 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G03105
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmetallothionein-like protein LSC54
Genome locationClcChr06:3257107..3261338
RNA-Seq ExpressionClc06G03105
SyntenyClc06G03105
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000347 - Metallothionein, family 15, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019194.1 hypothetical protein SDJN02_18152 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-0552.38Show/hide
Query:  MASGCKCGDNCSCGDSCNCQSGSLTITEATSLMIFIESTKRVGAAVGVAARATRATASEQLKR
        MASGCKCGDNCSCGDSCNC SG  T+ E TSL+    +      A   AAR T   A+++  R
Subjt:  MASGCKCGDNCSCGDSCNCQSGSLTITEATSLMIFIESTKRVGAAVGVAARATRATASEQLKR
TrEMBL top hitse value%identityAlignment
A0A6J1KD42 metallothionein-like protein LSC545.6e-0488Show/hide
Query:  MASGCKCGDNCSCGDSCNCQSGSLT
        M SGCKCGD+CSCGDSCNCQSGS+T
Subjt:  MASGCKCGDNCSCGDSCNCQSGSLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGGCTGCAAATGTGGTGATAATTGCTCATGTGGAGACAGCTGCAATTGCCAATCTGGTTCATTGACCATCACAGAGGCGACTTCCCTGATGATATTCATTGA
AAGTACGAAGCGAGTGGGTGCAGCTGTGGGAGTAGCTGCTCGTGCGACTCGTGCGACTGCAAGTGAGCAATTGAAAAGAATGGAAAAAGGCTCAAACAACAAAGCTTTTG
AATAA
mRNA sequenceShow/hide mRNA sequence
CCAGATGTGAACTAGTCAAATTACTTTTAATTTTAAGATAAATCCAAAAATATAGAATAATATAGGTGTATATACCAAGGTTTCATTTCCATATTAAAATTAAGGTATGC
TGGACAGTTTAAAATAATTGCAATTTAAAAAATAACTGCCGTTGATGCCAAGATTCGAAAAAAAAAAAAAAAAAAAAAAAAAAACTTCTATCATTATGAGTCATAGAGTC
CCCGTCAAGGAAGAATGCCGAAAACTCCTTGATTTGCACCTCAAAATCAATGAATGAATGACCTTCCAACACTCTCCTCCCTTTCTAACTTCTTTTTTTCTTTCTCTTTT
TTTTTTTCAACTAAAATACTCTTAAGAACCCCAAATATAAGGGTGAAAACCCTAGCTCTTGCTCAAATCCTGAATTCACCGGCAAACAATATCAAATCTAATAATATCAA
GTAAAATTAACTCTAAATAAAAGGCCAATAAAGCATTTTCAAGTATTTTTCACTAGGGGTTGAGGTCGAGCATGTTCCCTCAACCTCATTTTGGGTCTAAGGTGATCACT
TGGGCCAAAGTTTTCCTTAAAATTGTATAAACCACACCTGAAAAGAAACTCTATAAACATTCCCAAATAATATATTTGAAAATCCAACATTACTACCCAAGTGTACCTCA
TGGTACCCTATTCAGAAATCATCAATCACAATACAACCAAAACTAACGAAAAGTATAAACTTTCAAATTACATATCGACATAAATTAAAATGATATAACATTGTCAAAAT
CATGCTACCCACTTCCTTCATTATAAAATCAACGTCAATGCTACATTCACATGTAATTGTTAGGTAAATAAGATACAATTGGCGGTAAATCTAGACCACGATAGATTCAT
TAGAACCCAAATGCTACTTATTGAAAATTGTAAAAGAAAGAGTAAGCTAGAAAGCCTTAAACTTTGAGGGAAAAAAATTTATGTTGGAGTTGGACAAGTTGGGGTTTTTA
CCTAATTGCATCCCAACCAACTTGGTTTTGATAAATGTAACAATTTTTATCAATTATAAATTTCGTTTGTTACAACTAATCGGTTTGTAAATTTTGAATGTGATTTCGAA
AAAGTTGGTGGAATAGAGTTATTAGATAATTATTGAGATTTAGAGATCAATGAAAAAAAACAAGGTAAGAGGTGATAAAGTCTATGTAGGAACCGCCACGTGTATGATGT
TAATTGATTAATTTTAAACCTCAAGATGTCTATAATTAGAGAGGGGAGAGCTCCATCCCAAATCACAACAAATCCCAAGGCTTTGAAGAATTTGATCATCCAAAGTTTCA
AAATATTTTTACTCTGAAATAGAAATGGCTTCTGGCTGCAAATGTGGTGATAATTGCTCATGTGGAGACAGCTGCAATTGCCAATCTGGTTCATTGACCATCACAGAGGC
GACTTCCCTGATGATATTCATTGAAAGTACGAAGCGAGTGGGTGCAGCTGTGGGAGTAGCTGCTCGTGCGACTCGTGCGACTGCAAGTGAGCAATTGAAAAGAATGGAAA
AAGGCTCAAACAACAAAGCTTTTGAATAAAGTTGATGAATTCTGTTTTTTCTTTTCTTTTTCTCTTCTTTGTGTGATGAAAAAGACTGCCATTGAAACGCTAAGTCCATA
GGGAATGGGGTTTTTCATGGCCTTCTTGTTTGAAGTGAACTATGTTCTGCTTTGTTGTGGGTTGGGTTCTTATTCATCAAAGATTTAAGTGTTTGAATTTTGTGTTTCAT
GAATATTTGTTTTTGTGTACTTTTTCGTCTCCTAGATCTCTCACTTTTTATTATTGTTTTTCGTGTTTGCTTGAAAAATTATTGAAAAAGATCACCACGAGATGAATAGT
AGTTAGATCAAAGATAAGGAAGACCGACCCATAGGATCAACCATGAATCATGTGAAGAGTGACTTAAGCTTTAAAGCTCGACCTTGACTAATTACATGTATTTAGCTTCA
CCAATAAAGCTAGTTCGACCATTTATATCATTGATAATCTAAGTTTAAAATATTTAAAATCATGATTAAGATAATATTATTATAATAACTCTTTTCAAATATAGCAAAAT
GAGCCAAAGCTGTTTATAAATATTGAAAAATTTCAGTGATAAAGTGCAGTAGACTTCAAAGACAACGAAGAACACGAGCATCCAATTTACCTCAAAAATAAAAATAAAAG
CTTAATTGATACAAATCACTTCGATAAAATTAAACATAAAAGGAGAAAAAATAACTTTAAAAAATAAAATTTAATTGATTAAAACACATATTATCTCTAGAAATTTGAAT
CTACCCCTCACATATTCAATTAAAGAATCGTTTAAAAATAATTCTAATCCTTCAAAGACAATAAAGAACACGAGCATCCAATTTACCTTGGCAGCATTTTTGGAGGATGA
AGCTGCCTAAATCATCATTTAATGTGAGGTCAACCATGGCCATGAGCTCCTTCAGCTGGTTTCGAGTCATCACTACTTTGATCCTCAGAGGCCTCGAACTTTTCACTCCT
TCATATCCCTCAATTGGATGTACCAGCTTTCTCTTTCCCAACCAATTTCCCATATCTTAATTTTCTCCAATTCTTTGCCTCTCTTCTTCTCCTTCTTTAAGGGGTTACTC
TCCATTATTTTCA
Protein sequenceShow/hide protein sequence
MASGCKCGDNCSCGDSCNCQSGSLTITEATSLMIFIESTKRVGAAVGVAARATRATASEQLKRMEKGSNNKAFE