; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G03270 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G03270
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:3410304..3411538
RNA-Seq ExpressionClc06G03270
SyntenyClc06G03270
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5982.44Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHG+SSRR P + T AAGI++RS YSGDKIKHHH+DSA 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT

Query:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
         ++KGK GG G   SPRPTTRRYKLLKDVMC
Subjt:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

XP_004140491.1 uncharacterized protein LOC101205257 [Cucumis sativus]8.2e-6188.64Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDDSA
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHGSSSRR PS+GTNA GI+ RSEYSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDDSA

Query:  TAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        T  EKGKHGG G T SPRPTTRRYKLLKDVMC
Subjt:  TAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

XP_008467003.1 PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]1.5e-5988.81Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-SSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDD
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS SSRSHG SSSRR PS+GTNA GI++RSEYS DK IKHHHDD
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-SSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDD

Query:  SATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        S T  EKGKHGG G TPSPRPTTRRYKLLKDVMC
Subjt:  SATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

XP_023006670.1 uncharacterized protein LOC111499326 [Cucurbita maxima]5.3e-6083.21Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHG+SSRR P + T AAGI++RS YSGDKIKHHH+D+A 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT

Query:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        A++KGK GG G  PSPRPTTRRYKLLKDVMC
Subjt:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]1.3e-6691.6Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT
        MVDLQIVCCMCGDIGFPDKLFRCNKC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR+SSRSHGSSSRR PS+GTNAAG+++RSEYSG+KIKHHHDDSAT
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT

Query:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
         IEKGKHGG G TPSPRPTTRRYKLLKDVMC
Subjt:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein4.0e-6188.64Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDDSA
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHGSSSRR PS+GTNA GI+ RSEYSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDDSA

Query:  TAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        T  EKGKHGG G T SPRPTTRRYKLLKDVMC
Subjt:  TAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC1035044137.5e-6088.81Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-SSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDD
        MVDLQIVCCMCGDIGFPDKLF CNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS SSRSHG SSSRR PS+GTNA GI++RSEYS DK IKHHHDD
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-SSRSHG-SSSRRLPSSGTNAAGIINRSEYSGDK-IKHHHDD

Query:  SATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        S T  EKGKHGG G TPSPRPTTRRYKLLKDVMC
Subjt:  SATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

A0A6J1E160 uncharacterized protein LOC1110249978.0e-5479.85Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNA---AGIINRSEYSGDKIKHHHDD
        MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSS++ P     A   AGI+ RS+Y+  KIKH  D 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNA---AGIINRSEYSGDKIKHHHDD

Query:  SATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        +A A +KGKH G GG PSPRPTTRRYKLLKDVMC
Subjt:  SATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603011.1e-5881.68Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHG+SSRR P + T  AGI++RS YSGDKIKHHH+DSA 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT

Query:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
         ++KGK GG G   SPRPTTRRYKLLKDVMC
Subjt:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993262.6e-6083.21Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT
        MVDLQIVCC+CGD+GFPDKLFRC KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHG+SSRR P + T AAGI++RS YSGDKIKHHH+D+A 
Subjt:  MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSAT

Query:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        A++KGK GG G  PSPRPTTRRYKLLKDVMC
Subjt:  AIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein4.8e-3556.06Show/hide
Query:  LQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGR--SSSRSHGSSSRRLPSSGTNAAG-IINRSEYS-GDKIKHHHDDSA
        ++ VCCMCGD+GF DKLF C  CR RFQHSYCSNYY + AEP E+CDWC+ + R  S+   HG SS + PSS         NRSEYS G +IK H+++  
Subjt:  LQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGR--SSSRSHGSSSRRLPSSGTNAAG-IINRSEYS-GDKIKHHHDDSA

Query:  TAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
          + KG  G GGG  SP+  TRRYKLLKDVMC
Subjt:  TAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein7.7e-3352.14Show/hide
Query:  MVDLQ-IVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRS----HGSSSRRLPSSGTNAAGIINRSEYSGD----KI
        MVDL+  VCCMCGD+GF DKLF C+KC NRFQHSYCS+YY E A+PI++CDWCQCE +S + +    +G SS+R             RSEYS      K 
Subjt:  MVDLQ-IVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRS----HGSSSRRLPSSGTNAAGIINRSEYSGD----KI

Query:  KHHHDDSATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC
        +  +  ++++I      G  G PSPRP TRRYKLLKDVMC
Subjt:  KHHHDDSATAIEKGKHGGGGGTPSPRPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCTTCAAATCGTTTGTTGCATGTGCGGCGACATCGGTTTCCCTGACAAGCTCTTCCGCTGTAACAAGTGCCGCAACCGCTTCCAACACTCATACTGC
AGCAATTACTATAGCGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGTCGGAGTTCCTCCCGATCACACGGAAGCTCCTCCCGGAGACTA
CCGTCGTCGGGTACAAACGCCGCCGGAATCATCAACCGCTCCGAGTATTCCGGCGACAAAATCAAGCACCATCATGATGATTCTGCCACCGCGATCGAGAAGGGG
AAACACGGCGGCGGCGGTGGTACTCCGTCGCCGAGGCCGACCACGCGGAGGTACAAGCTTCTGAAGGATGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGTTAAAACGGATTTATACACCGACTCCAAAAACTTTCAAAGCCCACCACTTTTATTTTCTTTATATTTAAGTCTCTCTGTCTCTGTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCCCTTCTCTCTTCTTGGTGGTTCATCTTCATCTTTGATTAAAATTTCATTTTAGTGAGAAGTTGGGTTTGTAAAATTGGAATAATAATG
GTGGATCTTCAAATCGTTTGTTGCATGTGCGGCGACATCGGTTTCCCTGACAAGCTCTTCCGCTGTAACAAGTGCCGCAACCGCTTCCAACACTCATACTGCAGC
AATTACTATAGCGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGTCGGAGTTCCTCCCGATCACACGGAAGCTCCTCCCGGAGACTACCG
TCGTCGGGTACAAACGCCGCCGGAATCATCAACCGCTCCGAGTATTCCGGCGACAAAATCAAGCACCATCATGATGATTCTGCCACCGCGATCGAGAAGGGGAAA
CACGGCGGCGGCGGTGGTACTCCGTCGCCGAGGCCGACCACGCGGAGGTACAAGCTTCTGAAGGATGTAATGTGCTGAAGAAAGGGCGGTGAATAAAACGCAGCG
TTTTGATATGAGCGAAACGCGAATGGGGTTCCTTTCATTTTCTCTCTATAGTTCTCTTTTCTTAATCTCAAATGTTAATTATTATAATTAATATATATATATATA
TAAACGTATATATGTAGATATATATATAATATGGGTTGCTTTTGAGTGTGCGTGGAAACATCTGTAGACTCCATGAATTTTGCTTTGTGTTATATATATAAATAA
ATTATATAGTTCTCACTTTAGATCTTTAAATTAAAAGAAAAAAAAAATTGTAATTATAATGTATATTTCTTTCTCTCTTCTCTCAATTTCCAGGCAAATATATT
Protein sequenceShow/hide protein sequence
MVDLQIVCCMCGDIGFPDKLFRCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGSSSRRLPSSGTNAAGIINRSEYSGDKIKHHHDDSATAIEKG
KHGGGGGTPSPRPTTRRYKLLKDVMC