; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G03340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G03340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Genome locationClcChr06:3553803..3554779
RNA-Seq ExpressionClc06G03340
SyntenyClc06G03340
Gene Ontology termsGO:0008289 - lipid binding (molecular function)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR027923 - Hydrophobic seed protein domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140487.1 putative lipid-binding protein At4g00165 [Cucumis sativus]1.7e-5891.6Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        M  K    LALVVLLNI+ALACVSS KP CPPKVRPSPA TP TQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

XP_008458132.1 PREDICTED: putative lipid-binding protein At4g00165 [Cucumis melo]1.3e-5893.75Show/hide
Query:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG
        K    LALVVLLNI+ALACVSSAKP CPPKVRPSPA TPTTQAKCPKDTLKFGVCGSWLGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLG
Subjt:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG

Query:  VVSLDVPIALSLVVNSCGKSIPQGFVCP
        VVSLDVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VVSLDVPIALSLVVNSCGKSIPQGFVCP

XP_023000073.1 putative lipid-binding protein At4g00165 [Cucurbita maxima]2.5e-5787.79Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        MG +IP ALALV LLN++ALACVSSAKPGC PKV+PSPA TPT +AKCPKDTLK GVCGSWLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLGVV++DVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

XP_023514898.1 putative lipid-binding protein At4g00165 [Cucurbita pepo subsp. pepo]9.4e-5787.79Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        MG +IP ALALV LLNI+ALACVSSAKPGC PKV+PSPA TP  +AKCPKDTLK GVCGSWLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLGVV++DVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

XP_038875568.1 putative lipid-binding protein At4g00165 [Benincasa hispida]2.2e-5893.13Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        MG KI  ALAL+VLLNILALACVSSAKPGCPPKVR SPA TPT QAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLG V+LDVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

TrEMBL top hitse value%identityAlignment
A0A0A0KCL7 Proline-rich protein DC2.158.3e-5991.6Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        M  K    LALVVLLNI+ALACVSS KP CPPKVRPSPA TP TQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

A0A1S3C8D8 putative lipid-binding protein At4g001656.3e-5993.75Show/hide
Query:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG
        K    LALVVLLNI+ALACVSSAKP CPPKVRPSPA TPTTQAKCPKDTLKFGVCGSWLGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLG
Subjt:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG

Query:  VVSLDVPIALSLVVNSCGKSIPQGFVCP
        VVSLDVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VVSLDVPIALSLVVNSCGKSIPQGFVCP

A0A5D3CR05 Putative lipid-binding protein6.3e-5993.75Show/hide
Query:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG
        K    LALVVLLNI+ALACVSSAKP CPPKVRPSPA TPTTQAKCPKDTLKFGVCGSWLGLISEQIG KPSKKCCSLLTGLADLEAALCLCTALKANVLG
Subjt:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG

Query:  VVSLDVPIALSLVVNSCGKSIPQGFVCP
        VVSLDVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VVSLDVPIALSLVVNSCGKSIPQGFVCP

A0A6J1DWJ4 putative lipid-binding protein At4g001651.3e-5687.79Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        MG ++  ALAL VLL IL LACVSSAK GCPPKVRPSPA  P  QAKCPKDTLKFGVCGSWLGLI+EQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLGVV+LDVPIALSL+VNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

A0A6J1KLJ3 putative lipid-binding protein At4g001651.2e-5787.79Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN
        MG +IP ALALV LLN++ALACVSSAKPGC PKV+PSPA TPT +AKCPKDTLK GVCGSWLGLISEQIGAKPSKKCC+LL GLADLEAALCLCTALKAN
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKAN

Query:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP
        VLGVV++DVPIALSLVVNSCGKSIPQGFVCP
Subjt:  VLGVVSLDVPIALSLVVNSCGKSIPQGFVCP

SwissProt top hitse value%identityAlignment
P14009 14 kDa proline-rich protein DC2.153.6e-2752.9Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCP----PKVRPSPAATPT---TQAKCPKDTLKFGVCGSWLGLI-SEQIGAKPSKKCCSLLTGLADLEAALC
        MG K   ++AL   LNIL  A VSS +  CP    PK +P+P  TPT   +  KCP+D LK GVC   L L+ +  IG+ P+  CCSLL GL +LEAA+C
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCP----PKVRPSPAATPT---TQAKCPKDTLKFGVCGSWLGLI-SEQIGAKPSKKCCSLLTGLADLEAALC

Query:  LCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC
        LCTA+KAN+LG  +L++PIALSLV+N+CGK +P GF C
Subjt:  LCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC

Q01595 Cortical cell-delineating protein1.0e-2144.09Show/hide
Query:  LALVVLLNILALACVSSAKPGCPPKVRPSPAATPT----TQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGV
        +AL + L++L  A     +P C   V P+P   PT    +  +CP D LK  VC   LGL+  ++G    ++CC LL GL DL+AALCLCTA+KANVLG 
Subjt:  LALVVLLNILALACVSSAKPGCPPKVRPSPAATPT----TQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGV

Query:  VSLDVPIALSLVVNSCGKSIPQGFVCP
        + L+VP++L+ ++N+CG+  P+ F CP
Subjt:  VSLDVPIALSLVVNSCGKSIPQGFVCP

Q39176 Lipid transfer protein EARLI 14.3e-2048.18Show/hide
Query:  SSAKPGCP-PKVRP-SPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC
        S   P  P P  RP +P  TP +   CP D L+ GVC + L  L++ Q+G   ++ CCSL+ GL DL+AA+CLCTAL+ANVLG ++L+VPI+LS+++N C
Subjt:  SSAKPGCP-PKVRP-SPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSC

Query:  GKSIPQGFVC
         + +P GF C
Subjt:  GKSIPQGFVC

Q8RW93 Putative lipid-binding protein At4g001657.5e-3356.69Show/hide
Query:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG
        K   +L +++LLNI          PG   K  P P A   T  KCP+DTLKFGVCGSWLGL+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LG
Subjt:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG

Query:  VVSLDVPIALSLVVNSCGKSIPQGFVC
        V  + +P+AL+L++NSCGK++PQGFVC
Subjt:  VVSLDVPIALSLVVNSCGKSIPQGFVC

Q9SU35 pEARLI1-like lipid transfer protein 14.3e-2041.61Show/hide
Query:  MGFKIPNALALVVLLNILALA--------CVSSAKP-----------GCPPKVRPS----------PAATPTTQA-KCPKDTLKFGVCGSWL-GLISEQI
        M  K   +LAL   LNIL           C  S KP            CPP  RPS          P  TP +    CP D LK GVC + L  L++ Q+
Subjt:  MGFKIPNALALVVLLNILALA--------CVSSAKP-----------GCPPKVRPS----------PAATPTTQA-KCPKDTLKFGVCGSWL-GLISEQI

Query:  GAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC
        G   S++CCSL+ GL D++AA+CLCTAL+ANVLG ++L+VPI+LS+++N C + +P GF C
Subjt:  GAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC

Arabidopsis top hitse value%identityAlignment
AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.4e-2850Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAK----PGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTA
        M  K     AL++ LN+L    V+S K       PPK   SP   P  +  CP DTLK GVC   LGL++  +G+ P   CC+LL GLA+LEAA+CLCTA
Subjt:  MGFKIPNALALVVLLNILALACVSSAK----PGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTA

Query:  LKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC
        LKANVLG ++L+VPI L+L++N CGK +P GF C
Subjt:  LKANVLGVVSLDVPIALSLVVNSCGKSIPQGFVC

AT4G00165.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.3e-3456.69Show/hide
Query:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG
        K   +L +++LLNI          PG   K  P P A   T  KCP+DTLKFGVCGSWLGL+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LG
Subjt:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG

Query:  VVSLDVPIALSLVVNSCGKSIPQGFVC
        V  + +P+AL+L++NSCGK++PQGFVC
Subjt:  VVSLDVPIALSLVVNSCGKSIPQGFVC

AT4G00165.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.3e-3456.69Show/hide
Query:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG
        K   +L +++LLNI          PG   K  P P A   T  KCP+DTLKFGVCGSWLGL+SE IG  PS++CCSL+ GLAD EAA+CLCTALK ++LG
Subjt:  KIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLG

Query:  VVSLDVPIALSLVVNSCGKSIPQGFVC
        V  + +P+AL+L++NSCGK++PQGFVC
Subjt:  VVSLDVPIALSLVVNSCGKSIPQGFVC

AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.3e-2750.38Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKA
        M  KI  +L + +  NIL     ++   GC    +P P   P +   CPKDTLK GVC + L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKA

Query:  NVLGVVSLDVPIALSLVVNSCGKSIPQGFVC
         VLG ++L+VP++LSL++N CGK +P GFVC
Subjt:  NVLGVVSLDVPIALSLVVNSCGKSIPQGFVC

AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.3e-2750.38Show/hide
Query:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKA
        M  KI  +L + +  NIL     ++   GC    +P P   P +   CPKDTLK GVC + L  L+  Q+G  P K CCSLL GL DLEAA CLCTALKA
Subjt:  MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWL-GLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKA

Query:  NVLGVVSLDVPIALSLVVNSCGKSIPQGFVC
         VLG ++L+VP++LSL++N CGK +P GFVC
Subjt:  NVLGVVSLDVPIALSLVVNSCGKSIPQGFVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCAAAATTCCGAATGCATTGGCTCTTGTAGTCTTGTTGAACATCCTAGCTTTGGCTTGTGTTTCATCTGCCAAACCGGGTTGCCCTCCGAAGGTTCGACCATC
ACCTGCTGCCACCCCAACGACGCAAGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGGAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCAAAACCAA
GCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTCGAGGCTGCATTGTGCTTGTGCACTGCGCTGAAAGCGAATGTGTTGGGTGTTGTCAGCCTTGATGTGCCT
ATTGCTCTTAGTTTGGTTGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
CATGCACTAAAATTACCCTCAGCCACAATTTTCTGTCTGCCAATGGAGGAAATAGCCTCTGGCAACGTGCATTAACCAATGCCATTCACTCACTGCAAACCCTAAAGTTC
AATTCTAAGCCACAAGCATCACATGGGGCAAACCCAAATATCTCTCTCATCATAAATACACACACTAAAAAAACAAACTATTGGTATAGCCACATTGCTCCTAGAAAAAT
AGTTATGGGGTTCAAAATTCCGAATGCATTGGCTCTTGTAGTCTTGTTGAACATCCTAGCTTTGGCTTGTGTTTCATCTGCCAAACCGGGTTGCCCTCCGAAGGTTCGAC
CATCACCTGCTGCCACCCCAACGACGCAAGCGAAGTGCCCGAAAGATACACTGAAGTTTGGGGTTTGTGGGAGCTGGCTCGGGCTGATATCCGAGCAGATTGGGGCAAAA
CCAAGCAAGAAATGTTGTAGTTTGTTGACGGGGTTGGCCGATCTCGAGGCTGCATTGTGCTTGTGCACTGCGCTGAAAGCGAATGTGTTGGGTGTTGTCAGCCTTGATGT
GCCTATTGCTCTTAGTTTGGTTGTAAATTCATGTGGGAAAAGTATTCCACAAGGCTTTGTTTGTCCTTAATTAGAGAAGTTGATGTTGTTTGCTTCTCAAGTTATTGTTG
TTTGATTATGTAAAAGTCATGAGTGGACTTTCATTGGCTTTATATTGACTCTGTTTTTGTTTAGTGTGTATGGTACTTTCTTTGTAGCAATACGCGTAGAGTCTTTTATG
TTTCGAGAGTAAAACCCAAACCTTTAGAAATTAACATATAGAGTGCACCATCACCTTATATTAAGGCACTTTAGTTGGTCTCCAAAGATCAGAGTCTATCACTTATTGCA
TGATACCACACTTTGTGAGCTACATTTTAAGCTTAAATATTGCCAGTATTTGTGATTTTGATACCATTTTCACATAAATGTCACTCATTTTTGTTTG
Protein sequenceShow/hide protein sequence
MGFKIPNALALVVLLNILALACVSSAKPGCPPKVRPSPAATPTTQAKCPKDTLKFGVCGSWLGLISEQIGAKPSKKCCSLLTGLADLEAALCLCTALKANVLGVVSLDVP
IALSLVVNSCGKSIPQGFVCP