CuGenDBv2

Gene ID	Clc06G03790
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Protein Ycf2
Genome location	ClcChr06:4027924..4028858
RNA-Seq Expression	Clc06G03790
Synteny	Clc06G03790
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

QIT04093.1 Ycf2 protein [Luffa aegyptiaca]

3.3e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

QJR53001.1 hypothetical protein RF2 [Herpetospermum pedunculosum]

3.3e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

YP_009752033.1 Ycf2 protein [Cionosicys macranthus]

3.3e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

YP_009752370.1 Ycf2 protein [Bryonia marmorata]

3.3e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

3.3e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

TrEMBL top hits

e value

%identity

Alignment

A0A343F2F1 Protein Ycf2

1.6e-27

98.41

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

A0A410HFC5 Protein Ycf2

1.6e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

A0A6H0ESM3 Protein Ycf2

1.6e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

A0A6H0ET42 Protein Ycf2

1.6e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

A0A6M3RUH1 Protein Ycf2

1.6e-27

98.41

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSA SVVQDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

SwissProt top hits

e value

%identity

Alignment

A0ZZ78 Protein Ycf2

2.4e-28

93.65

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSA SV QDLWSLPGPDEKNGITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

B1A978 Protein Ycf2

2.4e-28

93.65

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSA SV QDLWSLPGPDEKNGITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

P08973 Protein Ycf2

8.2e-29

95.24

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSA SV QDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

Q0ZIV6 Protein Ycf2

8.2e-29

95.24

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSA SV QDLWSLPGPDEKNGITSYGLV
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

Q2L949 Protein Ycf2

2.4e-28

93.65

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKKLTILLYLLSCSA SV QDLWSLPGPDEKNGITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

4.6e-27

88.89

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Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKK TILLYLLSCSA SV QDLWSLP PDEKN ITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

4.6e-27

88.89

Show/hide

Query:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV
        MKKKSCNEG SYLYKWYFELGTSMKK TILLYLLSCSA SV QDLWSLP PDEKN ITSYG V
Subjt:  MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLV

Sequences

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CDS sequence

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ATGAAGAAGAAATCATGTAACGAAGGGGGTTCTTATTTGTACAAATGGTACTTTGAACTTGGAACGAGCATGAAGAAATTAACGATACTTCTTTATCTTTTGAGTTGTTC
TGCCGAATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAATGGGATCACTTCTTATGGACTCGTGACAGTTAAGAGTAATGCTCTAAGAGTGAGTT
AA

mRNA sequence

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Protein sequence

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MKKKSCNEGGSYLYKWYFELGTSMKKLTILLYLLSCSAESVVQDLWSLPGPDEKNGITSYGLVTVKSNALRVS

Clc06G03790 (gene) of Watermelon (cordophanus) v2 genome