; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G04120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4326699..4328510
RNA-Seq ExpressionClc06G04120
SyntenyClc06G04120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458677.1 PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]5.2e-2234.21Show/hide
Query:  RVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHF-IIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILK-
        +++ + S    + PL RF      +K S +M SL IS                 HF +II SL+    FF  +        F+IP++ F +I+     + 
Subjt:  RVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHF-IIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILK-

Query:  NSSFTFSIMNHFPM--AFFQFRNN--INCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLT
         SS T S+    P+     QFRN   ++   A  +  P  LS S EED G+I+Y  F SI S VF  I  +L+D    V LTN EVKF  N   + I+L 
Subjt:  NSSFTFSIMNHFPM--AFFQFRNN--INCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLT

Query:  KEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP
        KE  +CII GV +G++  F + L+P + F+DL  QS R+ ++K   +    + P G YAQ+ +YFP
Subjt:  KEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP

XP_023000631.1 uncharacterized protein LOC111494875 [Cucurbita maxima]1.0e-1738.12Show/hide
Query:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ
        +S T S+ N       QF N+    +  +    L L  S E+D G+I+Y  F SI S+VF RI   LND    V LTN +VKF  +  A+ I L +E R+
Subjt:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ

Query:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF
        C+I G+    +I F ++L+P++FF+DL  +S R+ L+K       +I P G YAQ+ +YF
Subjt:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF

XP_023513429.1 uncharacterized protein LOC111778050 [Cucurbita pepo subsp. pepo]7.8e-1835.24Show/hide
Query:  ASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKNSSFTFSIMNHFPMAFFQFRNNINCNMAFDYE---------LPLLLSNSNEEDRGQINYTR
        A L  S  FF  Y  N N  +  I L+ F   +T  I+    F+        M FF    +    + FD+            L L+        +++Y  
Subjt:  ASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKNSSFTFSIMNHFPMAFFQFRNNINCNMAFDYE---------LPLLLSNSNEEDRGQINYTR

Query:  FASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFG
        F SI S  F  I+ +L+     V LT+ +VKF +N++ E IVLTK  +QCII  V   D+I+F+ITL P +FF DL  QS RV L++  N+   MIVP G
Subjt:  FASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFG

Query:  NYAQYVIYFP
         Y Q+ +YFP
Subjt:  NYAQYVIYFP

XP_023514485.1 uncharacterized protein LOC111778745 [Cucurbita pepo subsp. pepo]4.6e-1838.75Show/hide
Query:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ
        +S T S+ N       QF N+    +  +    L L  S E+D G+I+Y  F SI S+VF RI   LND    V LTN +VKF     A+ I L KE R+
Subjt:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ

Query:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF
        C+I G+    +  F ++L P++FF+DL  QS R+ L+K       +I P G YAQ+ +YF
Subjt:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF

XP_031744051.1 uncharacterized protein LOC116404769 [Cucumis sativus]1.2e-1832.33Show/hide
Query:  RVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHF-IIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKN
        R++ + S    + PL RF      +K S +M SL IS                 HF +II SL+    +F  +        ++IP++ F NI+     + 
Subjt:  RVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHF-IIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKN

Query:  SSFTFSIMNH---FPMAFFQFRNN--INCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLT
         S     ++H       F QFRN   ++      +  P  LS S EED G+I+Y  F SI S V   I  +L+D    V LTN EVKF  N   + I L 
Subjt:  SSFTFSIMNH---FPMAFFQFRNN--INCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLT

Query:  KEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP
        KE  +CII GV   ++  F + L+P + F+DL  +S R+ ++K  N+   ++ P G YAQ+ +YFP
Subjt:  KEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein8.4e-1830.51Show/hide
Query:  FRVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHFIIIASLRFS--SSFFQLYSYNYNTRHFEIPLQDFINILTQ---
        F ++ +D  L  I  L+RF  +N +I+ S  M SL +                 PH  +  ++ F     FF  Y ++  T   +IP+Q   N + +   
Subjt:  FRVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHFIIIASLRFS--SSFFQLYSYNYNTRHFEIPLQDFINILTQ---

Query:  -PILKNSSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLL----LSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAE
          I   S F   +++   + F   RN          ELPL+    +  + +ED G I+   F SI SQ F R++    D  VRV  T+  V+F  ++  +
Subjt:  -PILKNSSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLL----LSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAE

Query:  GIVLTKEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIV-PFGNYAQYVIYFP
          +  +EG +CI+EGVG G   EFLI ++P   F ++  ++ RV L+K  + L T IV P G +A++VIYFP
Subjt:  GIVLTKEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIV-PFGNYAQYVIYFP

A0A0A0K9W8 Uncharacterized protein3.8e-1834.22Show/hide
Query:  FRVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHFIIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKN
        FRV+ +  LL+  +P+     + + I+ S   LSL +              N SP F  IA L+ +  FF LY  +  T  F   L+ F   + +  L+ 
Subjt:  FRVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHFIIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKN

Query:  -SSFTFSI-MNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEG
         SS  F++ M      +  F NN   N   +     LL+   + D G I YT F SI S+ F RI ++LN   V V  TN  V F  N N E I  +KE 
Subjt:  -SSFTFSI-MNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEG

Query:  RQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP
         QC+I GV  G++  F+IT+HP++FF DL +QS RV    + +    MI+P G + Q+ +YFP
Subjt:  RQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP

A0A1S3C8E9 uncharacterized protein LOC1034980052.5e-2234.21Show/hide
Query:  RVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHF-IIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILK-
        +++ + S    + PL RF      +K S +M SL IS                 HF +II SL+    FF  +        F+IP++ F +I+     + 
Subjt:  RVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHF-IIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILK-

Query:  NSSFTFSIMNHFPM--AFFQFRNN--INCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLT
         SS T S+    P+     QFRN   ++   A  +  P  LS S EED G+I+Y  F SI S VF  I  +L+D    V LTN EVKF  N   + I+L 
Subjt:  NSSFTFSIMNHFPM--AFFQFRNN--INCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLT

Query:  KEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP
        KE  +CII GV +G++  F + L+P + F+DL  QS R+ ++K   +    + P G YAQ+ +YFP
Subjt:  KEGRQCIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP

A0A6J1HM25 uncharacterized protein LOC1114642108.4e-1838.12Show/hide
Query:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ
        +S T S+ N       QF N+    +  +    L L  S E+D G+I+Y  F SI S+VF RI   LND    V LTN +VKF  +  A+ I L +E R+
Subjt:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ

Query:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF
        C+I G+    +  F ++L+P++FF+DL  QS R+ L+K       +I P G YAQ+ +YF
Subjt:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF

A0A6J1KGC4 uncharacterized protein LOC1114948754.9e-1838.12Show/hide
Query:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ
        +S T S+ N       QF N+    +  +    L L  S E+D G+I+Y  F SI S+VF RI   LND    V LTN +VKF  +  A+ I L +E R+
Subjt:  SSFTFSIMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQ

Query:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF
        C+I G+    +I F ++L+P++FF+DL  +S R+ L+K       +I P G YAQ+ +YF
Subjt:  CIIEGVGVGDQIEFLITLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCTCGTTTAGAGTTGATGTGGTGGATAGTCTTTTACATTGTATTTCCCCTCTCACTCGATTTCAAACTCAAAATATCCACATCAAATGGTCTTCACAAATGTT
ATCCCTAACAATCTCCAACAAAACTAATAATAATAATAATAATAATAATAATAATAATTCTTCCCCACATTTCATTATTATTGCATCTCTTCGATTTTCATCTTCATTCT
TCCAACTCTATTCCTACAACTACAACACTCGCCATTTTGAGATTCCCCTTCAAGACTTCATCAACATTTTGACCCAACCTATACTCAAAAACTCTTCATTCACATTCTCT
ATTATGAATCATTTCCCAATGGCTTTCTTTCAGTTTCGCAACAATATCAATTGCAATATGGCATTCGATTATGAATTGCCATTATTGTTGTCAAATTCAAACGAGGAGGA
TAGAGGCCAAATTAATTACACAAGATTTGCGTCCATTGCTTCGCAAGTGTTTGGACGTATTATAGCACAATTAAATGATTGCTTAGTTCGTGTTATTCTAACGAATTTTG
AAGTGAAGTTCGTTACTAATTCTAATGCTGAGGGGATTGTTCTTACCAAAGAGGGAAGACAATGCATAATTGAAGGAGTTGGCGTAGGTGACCAAATAGAATTCTTAATC
ACTCTCCATCCCATGTTATTCTTTCAAGATCTATTGGCTCAATCGATAAGGGTATGTTTGTACAAGAGATATAATAACCTCGATACAATGATTGTCCCTTTTGGAAATTA
TGCCCAATATGTCATCTATTTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATATGTCTTTCTCGTTTAGAGTTGATGTGGTGGATAGTCTTTTACATTGTATTTCCCCTCTCACTCGATTTCAA
ACTCAAAATATCCACATCAAATGGTCTTCACAAATGTTATCCCTAACAATCTCCAACAAAACTAATAATAATAATAATAATAATAATAATAATAATTCTTCCCCACATTT
CATTATTATTGCATCTCTTCGATTTTCATCTTCATTCTTCCAACTCTATTCCTACAACTACAACACTCGCCATTTTGAGATTCCCCTTCAAGACTTCATCAACATTTTGA
CCCAACCTATACTCAAAAACTCTTCATTCACATTCTCTATTATGAATCATTTCCCAATGGCTTTCTTTCAGTTTCGCAACAATATCAATTGCAATATGGCATTCGATTAT
GAATTGCCATTATTGTTGTCAAATTCAAACGAGGAGGATAGAGGCCAAATTAATTACACAAGATTTGCGTCCATTGCTTCGCAAGTGTTTGGACGTATTATAGCACAATT
AAATGATTGCTTAGTTCGTGTTATTCTAACGAATTTTGAAGTGAAGTTCGTTACTAATTCTAATGCTGAGGGGATTGTTCTTACCAAAGAGGGAAGACAATGCATAATTG
AAGGAGTTGGCGTAGGTGACCAAATAGAATTCTTAATCACTCTCCATCCCATGTTATTCTTTCAAGATCTATTGGCTCAATCGATAAGGGTATGTTTGTACAAGAGATAT
AATAACCTCGATACAATGATTGTCCCTTTTGGAAATTATGCCCAATATGTCATCTATTTTCCTTAA
Protein sequenceShow/hide protein sequence
MSFSFRVDVVDSLLHCISPLTRFQTQNIHIKWSSQMLSLTISNKTNNNNNNNNNNNSSPHFIIIASLRFSSSFFQLYSYNYNTRHFEIPLQDFINILTQPILKNSSFTFS
IMNHFPMAFFQFRNNINCNMAFDYELPLLLSNSNEEDRGQINYTRFASIASQVFGRIIAQLNDCLVRVILTNFEVKFVTNSNAEGIVLTKEGRQCIIEGVGVGDQIEFLI
TLHPMLFFQDLLAQSIRVCLYKRYNNLDTMIVPFGNYAQYVIYFP