; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G04130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4331158..4332238
RNA-Seq ExpressionClc06G04130
SyntenyClc06G04130
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458677.1 PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]1.3e-8967.56Show/hide
Query:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSL--EQPL
        MELK+EN+  FS A+ PL RF+DTADLKCSP MFSLI+SRHFP IITSLQ +PPFFTNFLCQ+QI+Q QIPIK F++ + +M H  YSSMTLSL  +QPL
Subjt:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSL--EQPL

Query:  NRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIR
         +I+LQF N RV  DQ+ L+   PL PSREEDVG+IDYGIF SI+S VF+ IA ELDDF+ALVTLTNS+ KF+V  +DI L++E  ECIIGG+  GEE R
Subjt:  NRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIR

Query:  FFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC
        FFVYLNP + FRDLA QS RIW+FKSP S+SI VAPIGLYAQFCVYFPQ    + SK  +IC
Subjt:  FFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC

XP_022964074.1 uncharacterized protein LOC111464210 [Cucurbita moschata]8.8e-5969.7Show/hide
Query:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK
        MK   Y+S+TLSL   LN++ LQFHNSR+ ++   +L LLPSRE+DVG+IDYGIFVSIDS VF+RIAT+L+D NALVTLTNSQ KF+VE ++ISL EE +
Subjt:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK

Query:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG
        EC+IGGL++ +E RFFV LNPIIFFRDLA+QSKRIWLFKS  ++SII+APIGLYAQFCVYF  RG
Subjt:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG

XP_023000631.1 uncharacterized protein LOC111494875 [Cucurbita maxima]5.2e-5969.7Show/hide
Query:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK
        MK   Y+S+TLSL   LN++ LQFHNSR+ ++   +L LLPSRE+DVG+IDYGIFVSIDS VF+RIAT+L+D NALVTLTNSQ KF+VE ++ISL EE +
Subjt:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK

Query:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG
        EC+IGGL++ +EIRFFV LNPIIFFRDLA +SKRIWLFKS  ++SII+APIGLYAQFCVYF +RG
Subjt:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG

XP_023514485.1 uncharacterized protein LOC111778745 [Cucurbita pepo subsp. pepo]4.8e-5767.88Show/hide
Query:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK
        MK   Y+S+TLSL   LN++ LQFHNSR+ ++   +L LLPSRE+DVG+IDYGIFVSIDS VF+RIAT+L+D  ALVTLTNSQ KFT+E ++ISL +E +
Subjt:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK

Query:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG
        EC+IGGL++ +E RFFV L+PIIFFRDLA QSKRIWLFKS  ++SII+APIGLYAQFCVYF  RG
Subjt:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG

XP_031744051.1 uncharacterized protein LOC116404769 [Cucumis sativus]1.0e-9168.7Show/hide
Query:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSL--EQPL
        MEL++EN+  FS A+ PL RFHD ADLKCSP MFSLI+SRHFP IITSLQ +PP+FTNF CQ+QI+Q QIPIK F+N + TMK  FYSSM L L  +QPL
Subjt:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSL--EQPL

Query:  NRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIR
        N+I LQF N RV  DQ  LF   PL PSREEDVG+IDYGIF SIDS V + IATELDD++ALVTLTNS+ KF+V  ++ISL++E  ECIIGG+A  EE R
Subjt:  NRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIR

Query:  FFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC
        FFVYLNP I FRDLAN+S+RIW+FKSPNS+SIIVAPIGLYAQFCVYFPQ    + SK  +IC
Subjt:  FFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC

TrEMBL top hitse value%identityAlignment
A0A0A0KCY3 Uncharacterized protein2.4e-5469.28Show/hide
Query:  EQPLNRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKG
        +QPLN+I LQF N RV  DQ  LF   PL PSREEDVG+IDYGIF SIDS V + IATELDD++ALVTLTNS+ KF+V  ++ISL++E  ECIIGG+A  
Subjt:  EQPLNRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKG

Query:  EEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC
        EE RFFVYLNP I FRDLAN+S+RIW+FKSPNS+SIIVAPIGLYAQFCVYFPQ    + SK  +IC
Subjt:  EEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC

A0A1S3C8E9 uncharacterized protein LOC1034980056.1e-9067.56Show/hide
Query:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSL--EQPL
        MELK+EN+  FS A+ PL RF+DTADLKCSP MFSLI+SRHFP IITSLQ +PPFFTNFLCQ+QI+Q QIPIK F++ + +M H  YSSMTLSL  +QPL
Subjt:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSL--EQPL

Query:  NRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIR
         +I+LQF N RV  DQ+ L+   PL PSREEDVG+IDYGIF SI+S VF+ IA ELDDF+ALVTLTNS+ KF+V  +DI L++E  ECIIGG+  GEE R
Subjt:  NRISLQFHNSRV--DQQ-LFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIR

Query:  FFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC
        FFVYLNP + FRDLA QS RIW+FKSP S+SI VAPIGLYAQFCVYFPQ    + SK  +IC
Subjt:  FFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC

A0A6J1HM25 uncharacterized protein LOC1114642104.3e-5969.7Show/hide
Query:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK
        MK   Y+S+TLSL   LN++ LQFHNSR+ ++   +L LLPSRE+DVG+IDYGIFVSIDS VF+RIAT+L+D NALVTLTNSQ KF+VE ++ISL EE +
Subjt:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK

Query:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG
        EC+IGGL++ +E RFFV LNPIIFFRDLA+QSKRIWLFKS  ++SII+APIGLYAQFCVYF  RG
Subjt:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG

A0A6J1KGC4 uncharacterized protein LOC1114948752.5e-5969.7Show/hide
Query:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK
        MK   Y+S+TLSL   LN++ LQFHNSR+ ++   +L LLPSRE+DVG+IDYGIFVSIDS VF+RIAT+L+D NALVTLTNSQ KF+VE ++ISL EE +
Subjt:  MKHAFYSSMTLSLEQPLNRISLQFHNSRVDQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETK

Query:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG
        EC+IGGL++ +EIRFFV LNPIIFFRDLA +SKRIWLFKS  ++SII+APIGLYAQFCVYF +RG
Subjt:  ECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQRG

A0A6J1KN57 uncharacterized protein LOC1114948717.6e-4039.27Show/hide
Query:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSLEQPLNR
        M  K++       A   L    + ADL+ +P M SL V    P     L   P FFT +      +   I ++LF+ T+  M    +SSM   L +  NR
Subjt:  MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSLEQPLNR

Query:  ISLQFHNSRVDQQL--FSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIRFFV
        + L+F +S+++ ++  F EL L P     + ++DYG FVSIDSP F+ I TEL    A VTLT+SQ KF+   ++I L +  K+CIIG + + +EI+F +
Subjt:  ISLQFHNSRVDQQL--FSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIRFFV

Query:  YLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQR
         L P +FF DL++QS R+WLFKS NS S ++ P+G+Y QF VYFP +
Subjt:  YLNPIIFFRDLANQSKRIWLFKSPNSFSIIVAPIGLYAQFCVYFPQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCAAGATTGAGAACATGGATCGTTTTTCAAATGCAATTTTCCCACTCATTCGATTCCATGACACAGCCGATTTGAAATGCTCACCAACAATGTTCTCTTTAAT
AGTCTCTCGTCATTTCCCTCATATCATTACATCTCTCCAAACTATGCCTCCTTTCTTCACCAATTTCCTTTGCCAACACCAAATTTACCAATGCCAAATTCCCATCAAAC
TCTTTCACAATACCATCCTCACTATGAAACACGCCTTTTATTCCTCAATGACTCTCTCTCTCGAACAACCTCTTAATCGCATCTCCCTTCAATTTCACAACTCAAGGGTT
GATCAGCAATTGTTTAGCGAATTGCCATTGCTACCTTCAAGAGAGGAAGATGTAGGCCAAATTGACTATGGAATCTTTGTATCAATTGATTCACCAGTGTTTAAACGCAT
TGCAACAGAGTTAGATGATTTCAATGCATTGGTTACCCTAACGAATTCACAAGCCAAATTCACTGTTGAAGGTAGAGACATAAGTCTTCACGAAGAGACAAAGGAATGCA
TAATTGGAGGTCTTGCAAAGGGAGAAGAAATTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGTCAAAAAGGATATGGTTATTCAAG
TCACCTAATTCCTTTAGTATAATTGTTGCTCCTATTGGATTGTATGCTCAATTTTGTGTCTATTTTCCACAAAGAGGAAAATTCCAAGACTCAAAAATGTTTAAGATATG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCAAGATTGAGAACATGGATCGTTTTTCAAATGCAATTTTCCCACTCATTCGATTCCATGACACAGCCGATTTGAAATGCTCACCAACAATGTTCTCTTTAAT
AGTCTCTCGTCATTTCCCTCATATCATTACATCTCTCCAAACTATGCCTCCTTTCTTCACCAATTTCCTTTGCCAACACCAAATTTACCAATGCCAAATTCCCATCAAAC
TCTTTCACAATACCATCCTCACTATGAAACACGCCTTTTATTCCTCAATGACTCTCTCTCTCGAACAACCTCTTAATCGCATCTCCCTTCAATTTCACAACTCAAGGGTT
GATCAGCAATTGTTTAGCGAATTGCCATTGCTACCTTCAAGAGAGGAAGATGTAGGCCAAATTGACTATGGAATCTTTGTATCAATTGATTCACCAGTGTTTAAACGCAT
TGCAACAGAGTTAGATGATTTCAATGCATTGGTTACCCTAACGAATTCACAAGCCAAATTCACTGTTGAAGGTAGAGACATAAGTCTTCACGAAGAGACAAAGGAATGCA
TAATTGGAGGTCTTGCAAAGGGAGAAGAAATTCGATTCTTTGTGTACTTAAATCCCATAATTTTTTTTCGTGATTTGGCAAATCAGTCAAAAAGGATATGGTTATTCAAG
TCACCTAATTCCTTTAGTATAATTGTTGCTCCTATTGGATTGTATGCTCAATTTTGTGTCTATTTTCCACAAAGAGGAAAATTCCAAGACTCAAAAATGTTTAAGATATG
TTGA
Protein sequenceShow/hide protein sequence
MELKIENMDRFSNAIFPLIRFHDTADLKCSPTMFSLIVSRHFPHIITSLQTMPPFFTNFLCQHQIYQCQIPIKLFHNTILTMKHAFYSSMTLSLEQPLNRISLQFHNSRV
DQQLFSELPLLPSREEDVGQIDYGIFVSIDSPVFKRIATELDDFNALVTLTNSQAKFTVEGRDISLHEETKECIIGGLAKGEEIRFFVYLNPIIFFRDLANQSKRIWLFK
SPNSFSIIVAPIGLYAQFCVYFPQRGKFQDSKMFKIC