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Clc06G04140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4334430..4338484
RNA-Seq ExpressionClc06G04140
SyntenyClc06G04140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02999.1 uncharacterized protein E5676_scaffold46G00930 [Cucumis melo var. makuwa]3.4e-2849.1Show/hide
Query:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK
        SS MD  L   +PP ATLTF      E     F+  IR+S  +++ +   I    FVSIDS+QF+ IVM+  N +KVDV L+  Q+ FS E +++ITLN 
Subjt:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK

Query:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS
        ED ECIIGGV  +E++ + IK RPT FF+DLT + ERVWFY  TTK N+VI API   A F I F++
Subjt:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS

XP_008458265.1 PREDICTED: uncharacterized protein LOC103497733 [Cucumis melo]3.4e-2849.1Show/hide
Query:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK
        SS MD  L   +PP ATLTF      E     F+  IR+S  +++ +   I    FVSIDS+QF+ IVM+  N +KVDV L+  Q+ FS E +++ITLN 
Subjt:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK

Query:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS
        ED ECIIGGV  +E++ + IK RPT FF+DLT + ERVWFY  TTK N+VI API   A F I F++
Subjt:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS

XP_022958852.1 uncharacterized protein LOC111460006 [Cucurbita moschata]9.8e-2856Show/hide
Query:  LSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVW
        LS PEN+ +V  I++ATFVSI+SQQFR IV    NS KVDV++  LQV F S +  + LNKED +CII G++  E++ F I L PTTFFNDLT + +RVW
Subjt:  LSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVW

Query:  FYGTTKANVVIYAPIDLNAGFEIYF
         + TT    VI APIDLN   EIYF
Subjt:  FYGTTKANVVIYAPIDLNAGFEIYF

XP_022959393.1 uncharacterized protein LOC111460379 [Cucurbita moschata]3.7e-2743.07Show/hide
Query:  HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLVARVNLYFTSPLLG-DGYVLNRQLKMFVSGHSDVKQ--QID
        H FT  LQILP+FF  F S + HHS  S+   Y TMFHM+L  +SSM      FI +  + +++L F +P    +  VL R+L    +  S+V+Q  Q+D
Subjt:  HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLVARVNLYFTSPLLG-DGYVLNRQLKMFVSGHSDVKQ--QID

Query:  YSIFVSIDSNEFKRIL-EHNVFLVHVTLTNSQVKFSGPIAEIILTTKERKCIIGGLAAGDEIQFLIPFSFHSFYFELTNWSKRIWLFKSTNSWSMITAPI
        Y  FVSIDS +FKR++ E N   V+V+LT SQ+KF  P  EI+LT +ER CI GG+ AG+  +F I      F+ +L++ SKR WLF S +  ++I  P 
Subjt:  YSIFVSIDSNEFKRIL-EHNVFLVHVTLTNSQVKFSGPIAEIILTTKERKCIIGGLAAGDEIQFLIPFSFHSFYFELTNWSKRIWLFKSTNSWSMITAPI

Query:  GL
        G+
Subjt:  GL

XP_023547578.1 uncharacterized protein LOC111806474 [Cucurbita pepo subsp. pepo]3.4e-2856Show/hide
Query:  LSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVW
        LS PEN+ +V  I++ATFVSIDSQQF+ +V    NS KVDV++  LQV F S +  + LNKED +CIIGG++  E++ F I L PTTFFNDLT + +RVW
Subjt:  LSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVW

Query:  FYGTTKANVVIYAPIDLNAGFEIYF
         + TT    VI APIDLN   EIYF
Subjt:  FYGTTKANVVIYAPIDLNAGFEIYF

TrEMBL top hitse value%identityAlignment
A0A1S3C7G3 uncharacterized protein LOC1034977331.6e-2849.1Show/hide
Query:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK
        SS MD  L   +PP ATLTF      E     F+  IR+S  +++ +   I    FVSIDS+QF+ IVM+  N +KVDV L+  Q+ FS E +++ITLN 
Subjt:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK

Query:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS
        ED ECIIGGV  +E++ + IK RPT FF+DLT + ERVWFY  TTK N+VI API   A F I F++
Subjt:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS

A0A1S3C827 uncharacterized protein LOC103497734 isoform X19.0e-2743.93Show/hide
Query:  IGLHGIDSSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDE
        +G   + SSSMD  L    PP A LTFHD    ++  A F+R+I +S  E+   +  +    FVS+DS++F+ IVM+  N +KV+V L+  QV FSSE +
Subjt:  IGLHGIDSSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDE

Query:  KITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS
        +IT+N ED  CII GV   E+I + ++ +PT+FF DL  L E+V FY  TTK N+ + API  N+ F I FL+
Subjt:  KITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS

A0A5D3BY47 Uncharacterized protein1.6e-2849.1Show/hide
Query:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK
        SS MD  L   +PP ATLTF      E     F+  IR+S  +++ +   I    FVSIDS+QF+ IVM+  N +KVDV L+  Q+ FS E +++ITLN 
Subjt:  SSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSE-DEKITLNK

Query:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS
        ED ECIIGGV  +E++ + IK RPT FF+DLT + ERVWFY  TTK N+VI API   A F I F++
Subjt:  EDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFY-GTTKANVVIYAPIDLNAGFEIYFLS

A0A6J1H2Z0 uncharacterized protein LOC1114600064.8e-2856Show/hide
Query:  LSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVW
        LS PEN+ +V  I++ATFVSI+SQQFR IV    NS KVDV++  LQV F S +  + LNKED +CII G++  E++ F I L PTTFFNDLT + +RVW
Subjt:  LSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTLQVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVW

Query:  FYGTTKANVVIYAPIDLNAGFEIYF
         + TT    VI APIDLN   EIYF
Subjt:  FYGTTKANVVIYAPIDLNAGFEIYF

A0A6J1H5T5 uncharacterized protein LOC1114603791.8e-2743.07Show/hide
Query:  HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLVARVNLYFTSPLLG-DGYVLNRQLKMFVSGHSDVKQ--QID
        H FT  LQILP+FF  F S + HHS  S+   Y TMFHM+L  +SSM      FI +  + +++L F +P    +  VL R+L    +  S+V+Q  Q+D
Subjt:  HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLVARVNLYFTSPLLG-DGYVLNRQLKMFVSGHSDVKQ--QID

Query:  YSIFVSIDSNEFKRIL-EHNVFLVHVTLTNSQVKFSGPIAEIILTTKERKCIIGGLAAGDEIQFLIPFSFHSFYFELTNWSKRIWLFKSTNSWSMITAPI
        Y  FVSIDS +FKR++ E N   V+V+LT SQ+KF  P  EI+LT +ER CI GG+ AG+  +F I      F+ +L++ SKR WLF S +  ++I  P 
Subjt:  YSIFVSIDSNEFKRIL-EHNVFLVHVTLTNSQVKFSGPIAEIILTTKERKCIIGGLAAGDEIQFLIPFSFHSFYFELTNWSKRIWLFKSTNSWSMITAPI

Query:  GL
        G+
Subjt:  GL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCATTGCCCTCCATGACACAACTGACCTTTTGGATGCAATTACCCCATTCACTAAACTTTCAAATAGATTCATTCTAAAATGCTCACCCACCATCTTCTCCTT
ATCAGCCTCCCTCAAATTCCCTCATCCTTTCACTGTACAACTCCAAATCTTGCCTCAATTCTTCTCCCTATTTATCTCTCTAAAACCCCACCATTCCCTCATTTCCCTTT
CATATCTCTACAATACTATGTTCCATATGAAACTCTCCCATTTTTCTTCTATGCGCCTCAGTTTTCTACATTTCATTCCATTATATCTTGTAGCTCGTGTTAACCTTTAC
TTTACAAGTCCCCTTTTAGGTGATGGTTATGTTTTGAATCGTCAATTGAAGATGTTTGTTTCGGGTCACAGCGATGTAAAGCAACAAATTGATTATTCAATTTTTGTTTC
AATTGATTCAAATGAATTCAAACGCATTCTAGAGCATAATGTTTTCTTAGTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTC
TTACCACTAAGGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATAGCTTTTATTTTGAATTGACAAATTGG
TCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATGATCACTGCACCTATTGGATTACACGGCATAGATTCTTCTTCAATGGACTTGTATCTTTCTGACGA
CAAACCACCATTTGCAACCCTCACATTTCATGATTATGGTACTTCTGAGCATTTTATGGCGCCCTTCTCTCGTATGATAAGGTTGTCATATCCAGAAAATAAAGAGAATG
TAGACAAAATTAACTATGCAACCTTTGTCTCAATCGATTCGCAACAGTTCAGATGCATTGTAATGAAGTGTAGAAATAGTAATAAAGTTGATGTTAGTTTGAGTACTTTA
CAAGTGGCATTCTCAAGTGAAGACGAAAAGATTACCCTAAACAAAGAGGATGGAGAATGCATAATCGGTGGTGTTCAAGTTGATGAACAAATCAACTTCTGGATCAAGCT
TCGTCCCACAACATTTTTTAATGATTTGACATTTTTGGCAGAAAGGGTGTGGTTTTATGGGACAACTAAAGCCAATGTTGTAATCTATGCCCCTATTGACTTGAATGCTG
GATTTGAGATTTATTTTCTGAGTTAA
mRNA sequenceShow/hide mRNA sequence
TCCTTCCATTACCATGTTCTTCATTGCCCTCCATGACACAACTGACCTTTTGGATGCAATTACCCCATTCACTAAACTTTCAAATAGATTCATTCTAAAATGCTCACCCA
CCATCTTCTCCTTATCAGCCTCCCTCAAATTCCCTCATCCTTTCACTGTACAACTCCAAATCTTGCCTCAATTCTTCTCCCTATTTATCTCTCTAAAACCCCACCATTCC
CTCATTTCCCTTTCATATCTCTACAATACTATGTTCCATATGAAACTCTCCCATTTTTCTTCTATGCGCCTCAGTTTTCTACATTTCATTCCATTATATCTTGTAGCTCG
TGTTAACCTTTACTTTACAAGTCCCCTTTTAGGTGATGGTTATGTTTTGAATCGTCAATTGAAGATGTTTGTTTCGGGTCACAGCGATGTAAAGCAACAAATTGATTATT
CAATTTTTGTTTCAATTGATTCAAATGAATTCAAACGCATTCTAGAGCATAATGTTTTCTTAGTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATT
GCAGAGATTATTCTTACCACTAAGGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATAGCTTTTATTTTGA
ATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATGATCACTGCACCTATTGGATTACACGGCATAGATTCTTCTTCAATGGACTTGT
ATCTTTCTGACGACAAACCACCATTTGCAACCCTCACATTTCATGATTATGGTACTTCTGAGCATTTTATGGCGCCCTTCTCTCGTATGATAAGGTTGTCATATCCAGAA
AATAAAGAGAATGTAGACAAAATTAACTATGCAACCTTTGTCTCAATCGATTCGCAACAGTTCAGATGCATTGTAATGAAGTGTAGAAATAGTAATAAAGTTGATGTTAG
TTTGAGTACTTTACAAGTGGCATTCTCAAGTGAAGACGAAAAGATTACCCTAAACAAAGAGGATGGAGAATGCATAATCGGTGGTGTTCAAGTTGATGAACAAATCAACT
TCTGGATCAAGCTTCGTCCCACAACATTTTTTAATGATTTGACATTTTTGGCAGAAAGGGTGTGGTTTTATGGGACAACTAAAGCCAATGTTGTAATCTATGCCCCTATT
GACTTGAATGCTGGATTTGAGATTTATTTTCTGAGTTAA
Protein sequenceShow/hide protein sequence
MFFIALHDTTDLLDAITPFTKLSNRFILKCSPTIFSLSASLKFPHPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLVARVNLY
FTSPLLGDGYVLNRQLKMFVSGHSDVKQQIDYSIFVSIDSNEFKRILEHNVFLVHVTLTNSQVKFSGPIAEIILTTKERKCIIGGLAAGDEIQFLIPFSFHSFYFELTNW
SKRIWLFKSTNSWSMITAPIGLHGIDSSSMDLYLSDDKPPFATLTFHDYGTSEHFMAPFSRMIRLSYPENKENVDKINYATFVSIDSQQFRCIVMKCRNSNKVDVSLSTL
QVAFSSEDEKITLNKEDGECIIGGVQVDEQINFWIKLRPTTFFNDLTFLAERVWFYGTTKANVVIYAPIDLNAGFEIYFLS