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Clc06G04220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4380358..4381206
RNA-Seq ExpressionClc06G04220
SyntenyClc06G04220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047513.1 hypothetical protein E6C27_scaffold498G001420 [Cucumis melo var. makuwa]8.3e-1762.03Show/hide
Query:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEEV
        PS LPL+ ELTF +PMEDWSP  V  +GKIFSIESE+F++I+  FS +NE D ILIT+ G +VTFSV PF E  +TEE+
Subjt:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEEV

KAE8652085.1 hypothetical protein Csa_018729, partial [Cucumis sativus]2.3e-1456.41Show/hide
Query:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE
        PS LPL+ ELTF +PMEDWS +QV+ +GK+FSIES++F +I+  FS + E +TILI S G +V+FS++PF E  +TEE
Subjt:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE

KGN45637.1 hypothetical protein Csa_005027 [Cucumis sativus]7.3e-0550Show/hide
Query:  SALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDT
        S +P+  ++ F +PMEDWS  ++  + K FSIES++F +I+TTF  YNEVDT
Subjt:  SALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDT

TYK26483.1 hypothetical protein E5676_scaffold313G00490 [Cucumis melo var. makuwa]1.4e-1662.82Show/hide
Query:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE
        PS LPL+ ELTF +PMEDWSP  V  +GKIFSIESE+F++I+  FS +NE D ILIT+ G +VTFSV PF E  +TEE
Subjt:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE

XP_031736681.1 uncharacterized protein LOC116402062 [Cucumis sativus]2.3e-1456.41Show/hide
Query:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE
        PS LPL+ ELTF +PMEDWS +QV+ +GK+FSIES++F +I+  FS + E +TILI S G +V+FS++PF E  +TEE
Subjt:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE

TrEMBL top hitse value%identityAlignment
A0A0A0KB76 Uncharacterized protein3.5e-0550Show/hide
Query:  SALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDT
        S +P+  ++ F +PMEDWS  ++  + K FSIES++F +I+TTF  YNEVDT
Subjt:  SALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDT

A0A5A7TVD7 Uncharacterized protein4.0e-1762.03Show/hide
Query:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEEV
        PS LPL+ ELTF +PMEDWSP  V  +GKIFSIESE+F++I+  FS +NE D ILIT+ G +VTFSV PF E  +TEE+
Subjt:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEEV

A0A5D3DSC2 Uncharacterized protein6.9e-1762.82Show/hide
Query:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE
        PS LPL+ ELTF +PMEDWSP  V  +GKIFSIESE+F++I+  FS +NE D ILIT+ G +VTFSV PF E  +TEE
Subjt:  PSALPLHHELTF-LPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTTGGGCCTTCTGCACTACCATTGCATCATGAATTGACATTCTTGCCCATGGAAGATTGGTCTCCTAGCCAAGTTAGCTTAAATGGAAAAATTTTCTCCATTGA
GTCAGAAATGTTTAGCAATATTTTAACAACATTTTCTGTCTACAATGAAGTTGATACAATTTTGATTACTTCAAAGGGTCCACAAGTCACATTCTCTGTGGTTCCATTTG
AGGAGATAATTATTACAGAAGAGGTATGTTTTGTGAACTTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTTGGGCCTTCTGCACTACCATTGCATCATGAATTGACATTCTTGCCCATGGAAGATTGGTCTCCTAGCCAAGTTAGCTTAAATGGAAAAATTTTCTCCATTGA
GTCAGAAATGTTTAGCAATATTTTAACAACATTTTCTGTCTACAATGAAGTTGATACAATTTTGATTACTTCAAAGGGTCCACAAGTCACATTCTCTGTGGTTCCATTTG
AGGAGATAATTATTACAGAAGAGGTATGTTTTGTGAACTTTGCATAA
Protein sequenceShow/hide protein sequence
MNLGPSALPLHHELTFLPMEDWSPSQVSLNGKIFSIESEMFSNILTTFSVYNEVDTILITSKGPQVTFSVVPFEEIIITEEVCFVNFA