; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G04255 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04255
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4417399..4423942
RNA-Seq ExpressionClc06G04255
SyntenyClc06G04255
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458677.1 PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]1.6e-2234.39Show/hide
Query:  LTYLSETAHLQCTKSMFSLIISHNSPYFLVVALRISPTFFYYYIVTEPEFFNWRIPINKICNIFRNGLS--YPAMVFTVYNENP-PRALLTFRDSSIGTF
        L   ++TA L+C+  MFSLIIS + P  ++ +L+I P FF  ++  + + F ++IPI    +I  +     Y +M  +++ + P  +  L FR+  +   
Subjt:  LTYLSETAHLQCTKSMFSLIISHNSPYFLVVALRISPTFFYYYIVTEPEFFNWRIPINKICNIFRNGLS--YPAMVFTVYNENP-PRALLTFRDSSIGTF

Query:  GRAMFSSRMTLSHEEDHQEDLGNVDIATFVTIDSEELRRLSRELIILDKVLVTLTNSQVMFSNPFKALILTKRKGECITGGIENGEEIKFIINLKPELLY
          A++ +          +ED+G +D   F +I+S   R ++ EL   D  LVTLTNS+V FS   K +IL K + ECI GG+E GEE +F + L P++L+
Subjt:  GRAMFSSRMTLSHEEDHQEDLGNVDIATFVTIDSEELRRLSRELIILDKVLVTLTNSQVMFSNPFKALILTKRKGECITGGIENGEEIKFIINLKPELLY

Query:  TQLTFRSKRVWMYKSSKGRGI
          L  +S R+WM+KS +   I
Subjt:  TQLTFRSKRVWMYKSSKGRGI

XP_022959463.1 uncharacterized protein LOC111460429 [Cucurbita moschata]3.1e-2944.79Show/hide
Query:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR
        M+FT+  +NP  AVL F +S I    +  F  +      +DH++D+  NIDF +FV+IDS+EF+R+  E   I  V V +TN QV F+   K+IIL++  
Subjt:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR

Query:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP
        E+CIIGG+E G+EI+F+I+L P  F+ +L  +  RVW+Y+TSNARS I+A ++ NA+  +YFP
Subjt:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP

XP_023000631.1 uncharacterized protein LOC111494875 [Cucurbita maxima]1.8e-2142.57Show/hide
Query:  VLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRREECIIGGVEIGEEI
        +L FH+S IG        + R+L      ++D+G ID+  FV+IDSE F+R+  + L     LVTLTNSQV FS   K+I L + R EC+IGG+   +EI
Subjt:  VLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRREECIIGGVEIGEEI

Query:  KFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYF
        +F +SL P  F+  L  RSKR+W++K++ A S+I A + L A+  +YF
Subjt:  KFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYF

XP_023006671.1 uncharacterized protein LOC111499327 [Cucurbita maxima]2.3e-2944.17Show/hide
Query:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR
        M+FT+  +NP  AVL F +S I    +  F  +      +DH++D+  NIDFATFV+IDS++F+ +  E   I  V V +TN QV F+   K+IIL++  
Subjt:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR

Query:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP
        E+CIIGG+E G+EI+F+I+L P  F+ +L  +  RVW+Y+T +AR  I+A +D NA+ E+YFP
Subjt:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP

XP_023547389.1 uncharacterized protein LOC111806354 [Cucurbita pepo subsp. pepo]2.6e-2843.56Show/hide
Query:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR
        M+FT+  +NP  AVL F +S +    +  F  +      +DH++D+  +IDF TFV+IDS+EF+R+  E   I  V V +TN QV F+   K+IIL++  
Subjt:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR

Query:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP
        E+CIIGG+E G+EI+F+I+L P  F+ +L  +  RVW+Y+TSNAR  I+A ++ NA+  +YFP
Subjt:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8E9 uncharacterized protein LOC1034980057.9e-2334.39Show/hide
Query:  LTYLSETAHLQCTKSMFSLIISHNSPYFLVVALRISPTFFYYYIVTEPEFFNWRIPINKICNIFRNGLS--YPAMVFTVYNENP-PRALLTFRDSSIGTF
        L   ++TA L+C+  MFSLIIS + P  ++ +L+I P FF  ++  + + F ++IPI    +I  +     Y +M  +++ + P  +  L FR+  +   
Subjt:  LTYLSETAHLQCTKSMFSLIISHNSPYFLVVALRISPTFFYYYIVTEPEFFNWRIPINKICNIFRNGLS--YPAMVFTVYNENP-PRALLTFRDSSIGTF

Query:  GRAMFSSRMTLSHEEDHQEDLGNVDIATFVTIDSEELRRLSRELIILDKVLVTLTNSQVMFSNPFKALILTKRKGECITGGIENGEEIKFIINLKPELLY
          A++ +          +ED+G +D   F +I+S   R ++ EL   D  LVTLTNS+V FS   K +IL K + ECI GG+E GEE +F + L P++L+
Subjt:  GRAMFSSRMTLSHEEDHQEDLGNVDIATFVTIDSEELRRLSRELIILDKVLVTLTNSQVMFSNPFKALILTKRKGECITGGIENGEEIKFIINLKPELLY

Query:  TQLTFRSKRVWMYKSSKGRGI
          L  +S R+WM+KS +   I
Subjt:  TQLTFRSKRVWMYKSSKGRGI

A0A6J1H604 uncharacterized protein LOC1114604291.5e-2944.79Show/hide
Query:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR
        M+FT+  +NP  AVL F +S I    +  F  +      +DH++D+  NIDF +FV+IDS+EF+R+  E   I  V V +TN QV F+   K+IIL++  
Subjt:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR

Query:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP
        E+CIIGG+E G+EI+F+I+L P  F+ +L  +  RVW+Y+TSNARS I+A ++ NA+  +YFP
Subjt:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP

A0A6J1HM25 uncharacterized protein LOC1114642105.6e-2141.22Show/hide
Query:  VLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRREECIIGGVEIGEEI
        +L FH+S IG        + R+L      ++D+G ID+  FV+IDSE F+R+  + L     LVTLTNSQV FS   K+I L + R EC+IGG+   +E 
Subjt:  VLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRREECIIGGVEIGEEI

Query:  KFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYF
        +F +SL P  F+  L  +SKR+W++K++ A S+I A + L A+  +YF
Subjt:  KFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYF

A0A6J1KGC4 uncharacterized protein LOC1114948758.7e-2242.57Show/hide
Query:  VLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRREECIIGGVEIGEEI
        +L FH+S IG        + R+L      ++D+G ID+  FV+IDSE F+R+  + L     LVTLTNSQV FS   K+I L + R EC+IGG+   +EI
Subjt:  VLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRREECIIGGVEIGEEI

Query:  KFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYF
        +F +SL P  F+  L  RSKR+W++K++ A S+I A + L A+  +YF
Subjt:  KFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYF

A0A6J1KYE0 uncharacterized protein LOC1114993271.1e-2944.17Show/hide
Query:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR
        M+FT+  +NP  AVL F +S I    +  F  +      +DH++D+  NIDFATFV+IDS++F+ +  E   I  V V +TN QV F+   K+IIL++  
Subjt:  MVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLG-NIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVMFSNPFKQIILTKRR

Query:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP
        E+CIIGG+E G+EI+F+I+L P  F+ +L  +  RVW+Y+T +AR  I+A +D NA+ E+YFP
Subjt:  EECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCCCTCTTGACTTACCTTAGTGAAACAGCTCATTTGCAGTGCACCAAGTCCATGTTCTCATTAATAATATCCCACAATTCCCCTTATTTCTTGGTTGTTGC
CCTACGGATCTCACCTACATTCTTCTACTATTACATTGTTACAGAGCCAGAGTTTTTCAATTGGAGGATTCCCATTAACAAAATTTGCAATATCTTCAGAAATGGCCTGT
CTTATCCTGCAATGGTTTTCACTGTCTATAATGAAAACCCTCCTCGTGCTCTCCTTACATTTCGTGATTCTTCTATAGGGACTTTTGGTCGGGCAATGTTCTCTAGTAGA
ATGACGTTGTCACATGAAGAAGATCATCAAGAGGATTTAGGTAACGTTGACATAGCAACATTTGTCACAATTGATTCAGAAGAGTTAAGACGTCTTTCAAGAGAGTTAAT
AATACTCGACAAAGTTCTTGTTACTTTGACAAATTCACAAGTGATGTTCTCAAATCCATTTAAAGCGCTTATTCTTACCAAAAGGAAAGGAGAATGCATAACTGGAGGAA
TTGAAAATGGAGAAGAAATTAAATTCATAATCAATCTGAAGCCAGAACTTTTGTATACTCAGTTGACGTTTAGGTCAAAAAGAGTTTGGATGTACAAATCAAGCAAAGGC
CGAGGGATTTTCAATTGGAGGATTCCCCTTAAGAAAATTTGCAAAGTTCTCAGAGAAGGCATAGCTTGTTCTTCAATGGTTTTCACTGTCTATAACCATAACCCTCTTGG
TGCTGTCCTTACCTTTCATGATTCTTCTATAGGGGCTTTTGGTCGGGAATTGTTCTCTCGTAAAAGGAAACTGTGGCATGAGGAAGATCATCAAGAGGATTTAGGTAACA
TTGACTTTGCAACTTTTGTTACAATTGATTCAGAAGAGTTCAAACGCCTTCAAAGAGAGTTACTGTACATTGACAAAGTTCTTGTTACATTGACAAATTCACAAGTGATG
TTCTCAAATCCATTCAAACAGATTATTCTTACAAAAAGGAGAGAAGAATGCATAATTGGAGGAGTTGAAATTGGAGAAGAAATTAAATTCATAATCAGTCTGAAGCCAGA
TTTTTTTTATACTCAGTTAATGTTTAGGTCGAAAAGAGTATGGATGTACAAGACAAGTAATGCTCGAAGTGTAATCTATGCTACTCTTGACTTGAATGCTCGAGTTGAGA
TCTATTTTCCCAATCTAACCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCCCTCTTGACTTACCTTAGTGAAACAGCTCATTTGCAGTGCACCAAGTCCATGTTCTCATTAATAATATCCCACAATTCCCCTTATTTCTTGGTTGTTGC
CCTACGGATCTCACCTACATTCTTCTACTATTACATTGTTACAGAGCCAGAGTTTTTCAATTGGAGGATTCCCATTAACAAAATTTGCAATATCTTCAGAAATGGCCTGT
CTTATCCTGCAATGGTTTTCACTGTCTATAATGAAAACCCTCCTCGTGCTCTCCTTACATTTCGTGATTCTTCTATAGGGACTTTTGGTCGGGCAATGTTCTCTAGTAGA
ATGACGTTGTCACATGAAGAAGATCATCAAGAGGATTTAGGTAACGTTGACATAGCAACATTTGTCACAATTGATTCAGAAGAGTTAAGACGTCTTTCAAGAGAGTTAAT
AATACTCGACAAAGTTCTTGTTACTTTGACAAATTCACAAGTGATGTTCTCAAATCCATTTAAAGCGCTTATTCTTACCAAAAGGAAAGGAGAATGCATAACTGGAGGAA
TTGAAAATGGAGAAGAAATTAAATTCATAATCAATCTGAAGCCAGAACTTTTGTATACTCAGTTGACGTTTAGGTCAAAAAGAGTTTGGATGTACAAATCAAGCAAAGGC
CGAGGGATTTTCAATTGGAGGATTCCCCTTAAGAAAATTTGCAAAGTTCTCAGAGAAGGCATAGCTTGTTCTTCAATGGTTTTCACTGTCTATAACCATAACCCTCTTGG
TGCTGTCCTTACCTTTCATGATTCTTCTATAGGGGCTTTTGGTCGGGAATTGTTCTCTCGTAAAAGGAAACTGTGGCATGAGGAAGATCATCAAGAGGATTTAGGTAACA
TTGACTTTGCAACTTTTGTTACAATTGATTCAGAAGAGTTCAAACGCCTTCAAAGAGAGTTACTGTACATTGACAAAGTTCTTGTTACATTGACAAATTCACAAGTGATG
TTCTCAAATCCATTCAAACAGATTATTCTTACAAAAAGGAGAGAAGAATGCATAATTGGAGGAGTTGAAATTGGAGAAGAAATTAAATTCATAATCAGTCTGAAGCCAGA
TTTTTTTTATACTCAGTTAATGTTTAGGTCGAAAAGAGTATGGATGTACAAGACAAGTAATGCTCGAAGTGTAATCTATGCTACTCTTGACTTGAATGCTCGAGTTGAGA
TCTATTTTCCCAATCTAACCATCTAA
Protein sequenceShow/hide protein sequence
MATSLLTYLSETAHLQCTKSMFSLIISHNSPYFLVVALRISPTFFYYYIVTEPEFFNWRIPINKICNIFRNGLSYPAMVFTVYNENPPRALLTFRDSSIGTFGRAMFSSR
MTLSHEEDHQEDLGNVDIATFVTIDSEELRRLSRELIILDKVLVTLTNSQVMFSNPFKALILTKRKGECITGGIENGEEIKFIINLKPELLYTQLTFRSKRVWMYKSSKG
RGIFNWRIPLKKICKVLREGIACSSMVFTVYNHNPLGAVLTFHDSSIGAFGRELFSRKRKLWHEEDHQEDLGNIDFATFVTIDSEEFKRLQRELLYIDKVLVTLTNSQVM
FSNPFKQIILTKRREECIIGGVEIGEEIKFIISLKPDFFYTQLMFRSKRVWMYKTSNARSVIYATLDLNARVEIYFPNLTI