; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G04290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4447211..4447549
RNA-Seq ExpressionClc06G04290
SyntenyClc06G04290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575164.1 hypothetical protein SDJN03_25803, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0437.04Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV
        F  +LE+  PL DA FLF  ++ EADVK T+  FSL  S  +   RF+ +L I    FA YS  +  N    ISL  F   + +  +Y S   ++ E + 
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV

Query:  -MALKFRN
         M L+F N
Subjt:  -MALKFRN

XP_008458264.1 PREDICTED: uncharacterized protein LOC103497732 [Cucumis melo]1.2e-0744.34Show/hide
Query:  LENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNAR-NYYSQLTILMEP--QVM
        L NF PL DAA LF NI  EADVKV+  + S++T+ R     FVA LHI   FF  Y   I ++I S ISLP FH  +  AR ++ S + I M+     +
Subjt:  LENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNAR-NYYSQLTILMEP--QVM

Query:  ALKFRN
         L+F+N
Subjt:  ALKFRN

XP_022958858.1 uncharacterized protein LOC111460013 [Cucurbita moschata]4.6e-0437.04Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV
        F  +LE+  PL DA FLF  ++ EADVK T+  FSL  S  +   RF+ +L I    FA YS  +  N    ISL  F   + +  +Y S   ++ E + 
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV

Query:  -MALKFRN
         M L+F N
Subjt:  -MALKFRN

XP_023006008.1 uncharacterized protein LOC111498886 [Cucurbita maxima]1.1e-0537.96Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV
        F  +LE+  PL DA FLF  ++ E DVK T+  FSL  S  +   RF+ +L I    FA YS  +  N    ISLP F  F+ +  +Y S   ++ E + 
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV

Query:  -MALKFRN
         M L+F N
Subjt:  -MALKFRN

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]2.7e-0439.36Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTI
        F  RL +F PL +A  L   I++EAD+K +  +FSL+TS  +   RFVA   I   FFA+YS  + RN +S +SL  F+  + +   ++S +TI
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTI

TrEMBL top hitse value%identityAlignment
A0A0A0KB79 Uncharacterized protein1.1e-0647.62Show/hide
Query:  LENFGPLEDAAFLFRNIADEADVKVTYKRFSLV-TSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARN
        ++NF PL DAA L  NIA EADV+++  +FS++ T   H    FVA LHI   FFA+Y I     I S ISLP  H  +  ARN
Subjt:  LENFGPLEDAAFLFRNIADEADVKVTYKRFSLV-TSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARN

A0A1S3C7K5 uncharacterized protein LOC1034977325.7e-0844.34Show/hide
Query:  LENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNAR-NYYSQLTILMEP--QVM
        L NF PL DAA LF NI  EADVKV+  + S++T+ R     FVA LHI   FF  Y   I ++I S ISLP FH  +  AR ++ S + I M+     +
Subjt:  LENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNAR-NYYSQLTILMEP--QVM

Query:  ALKFRN
         L+F+N
Subjt:  ALKFRN

A0A6J1H490 uncharacterized protein LOC1114600132.2e-0437.04Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV
        F  +LE+  PL DA FLF  ++ EADVK T+  FSL  S  +   RF+ +L I    FA YS  +  N    ISL  F   + +  +Y S   ++ E + 
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV

Query:  -MALKFRN
         M L+F N
Subjt:  -MALKFRN

A0A6J1KZ05 uncharacterized protein LOC1114988871.3e-0439.36Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTI
        F  RL +F PL +A  L   I++EAD+K +  +FSL+TS  +   RFVA   I   FFA+YS  + RN +S +SL  F+  + +   ++S +TI
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTI

A0A6J1L3R4 uncharacterized protein LOC1114988865.3e-0637.96Show/hide
Query:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV
        F  +LE+  PL DA FLF  ++ E DVK T+  FSL  S  +   RF+ +L I    FA YS  +  N    ISLP F  F+ +  +Y S   ++ E + 
Subjt:  FAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQV

Query:  -MALKFRN
         M L+F N
Subjt:  -MALKFRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTCGTTCGCGGGGAGGCTTGAGAACTTTGGTCCCCTTGAAGACGCAGCCTTTCTATTTCGTAATATTGCTGATGAAGCCGACGTTAAAGTCACATACAAGCGGTT
CTCGTTAGTCACCTCCAGCCGTCATACGCCCTTTCGCTTCGTAGCAGAACTCCATATTTTGCCCCATTTTTTCGCCCACTATTCTATTGGTATCCATCGGAATATCAATT
CAAGCATTTCTCTCCCACTTTTCCATACATTTATTCGGAACGCTAGAAATTATTATTCTCAATTGACCATCCTTATGGAACCACAAGTCATGGCCCTTAAATTTCGTAAT
TTCAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCTCGTTCGCGGGGAGGCTTGAGAACTTTGGTCCCCTTGAAGACGCAGCCTTTCTATTTCGTAATATTGCTGATGAAGCCGACGTTAAAGTCACATACAAGCGGTT
CTCGTTAGTCACCTCCAGCCGTCATACGCCCTTTCGCTTCGTAGCAGAACTCCATATTTTGCCCCATTTTTTCGCCCACTATTCTATTGGTATCCATCGGAATATCAATT
CAAGCATTTCTCTCCCACTTTTCCATACATTTATTCGGAACGCTAGAAATTATTATTCTCAATTGACCATCCTTATGGAACCACAAGTCATGGCCCTTAAATTTCGTAAT
TTCAGTTAG
Protein sequenceShow/hide protein sequence
MRSFAGRLENFGPLEDAAFLFRNIADEADVKVTYKRFSLVTSSRHTPFRFVAELHILPHFFAHYSIGIHRNINSSISLPLFHTFIRNARNYYSQLTILMEPQVMALKFRN
FS