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Clc06G04730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G04730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:4907239..4908200
RNA-Seq ExpressionClc06G04730
SyntenyClc06G04730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575119.1 hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2460.68Show/hide
Query:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKG
        MMK+VL+L    LLL+M DAAMH VV+KKH RKLA+  GG  TPET VF    +  P+ +  V        ADV  ++  N NN DDDDENLGYKNYGKG
Subjt:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKG

Query:  SDTETHRYFSSDKPYRP
        SDTETHRYFSSDKPY P
Subjt:  SDTETHRYFSSDKPYRP

KAG6594018.1 hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2059.66Show/hide
Query:  MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYG
        M MMKR LLLFA  LLL+  DA MH V+ KK  RKLAQ F  G+ P+T VF             V    D D A    DVG N NN D+DDENLGYKNYG
Subjt:  MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYG

Query:  KGSDTETHRYFSSDKPYRP
        KGSDTETHRYFSS+KPYRP
Subjt:  KGSDTETHRYFSSDKPYRP

KAG7013689.1 hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2460.68Show/hide
Query:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKG
        MMK+VL+L    LLL+M DAAMH VV+KKH RKLA+  GG  TPET VF    +  P+ +  V        ADV  ++  N NN DDDDENLGYKNYGKG
Subjt:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKG

Query:  SDTETHRYFSSDKPYRP
        SDTETHRYFSSDKPY P
Subjt:  SDTETHRYFSSDKPYRP

TYK02960.1 uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]1.2e-2363.64Show/hide
Query:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGAN---KNNTDDDDENLGYKN
        MMKRVLLLFA LLLLLMADAAM +VV+KK  RKLAQG G  R P+  VF            + ANEP+    DVA +DV AN    ++ +DDD NLGYKN
Subjt:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGAN---KNNTDDDDENLGYKN

Query:  YGKGSDTETHRYFSSDKPYRP
        YGKGSDTETHRYFSSDKPYRP
Subjt:  YGKGSDTETHRYFSSDKPYRP

XP_004150985.1 uncharacterized protein LOC101207042 [Cucumis sativus]2.8e-2364.23Show/hide
Query:  MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGANKN---NTDDDDENLGY
        MIMMKRVLLLFAALLLLLMADA    +V+KK  RKLAQGF   RTP+  VF            + ANE D ++ DVA +DV AN N   + +DDD NLGY
Subjt:  MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGANKN---NTDDDDENLGY

Query:  KNYGKGSDTETHRYFSSDKPYRP
        KNYGKGSDTETHRYFSSDKPYRP
Subjt:  KNYGKGSDTETHRYFSSDKPYRP

TrEMBL top hitse value%identityAlignment
A0A0A0KGD6 Uncharacterized protein1.3e-2364.23Show/hide
Query:  MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGANKN---NTDDDDENLGY
        MIMMKRVLLLFAALLLLLMADA    +V+KK  RKLAQGF   RTP+  VF            + ANE D ++ DVA +DV AN N   + +DDD NLGY
Subjt:  MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGANKN---NTDDDDENLGY

Query:  KNYGKGSDTETHRYFSSDKPYRP
        KNYGKGSDTETHRYFSSDKPYRP
Subjt:  KNYGKGSDTETHRYFSSDKPYRP

A0A5D3BV16 Uncharacterized protein6.0e-2463.64Show/hide
Query:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGAN---KNNTDDDDENLGYKN
        MMKRVLLLFA LLLLLMADAAM +VV+KK  RKLAQG G  R P+  VF            + ANEP+    DVA +DV AN    ++ +DDD NLGYKN
Subjt:  MMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVA-NDVGAN---KNNTDDDDENLGYKN

Query:  YGKGSDTETHRYFSSDKPYRP
        YGKGSDTETHRYFSSDKPYRP
Subjt:  YGKGSDTETHRYFSSDKPYRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATGATGAAGAGGGTTCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGCACGACGTCGTCGACAAGAAGCATACACGTAAGCTAGC
TCAAGGCTTCGGTGGCGGGAGAACCCCCGAAACGCGAGTGTTCTACGTTGAAAATAAGCCTCACCCTGATCATATTGCTGATGTTGCAAATGAGCCTGACCCTGATCATG
CTGATGTTGCTAATGACGTTGGAGCTAACAAAAACAACACTGACGACGACGATGAAAATCTTGGTTATAAAAATTACGGCAAGGGTTCCGACACTGAAACTCACCGTTAC
TTCTCGAGCGATAAGCCATACAGACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATATATATATATATATATATATATATATATCTGCATATCTGCAGTGTTAATAACAGTGGCCAGAATTTTCCCTTTATATATATGCTTCATTTTTCTCTTATTCATACCAT
ATCCTTGATTACCAAACAAATAACAAGGGATGATTATGATGAAGAGGGTTCTTCTTCTCTTTGCTGCCTTGTTGTTGCTCCTCATGGCAGACGCCGCGATGCACGACGTC
GTCGACAAGAAGCATACACGTAAGCTAGCTCAAGGCTTCGGTGGCGGGAGAACCCCCGAAACGCGAGTGTTCTACGTTGAAAATAAGCCTCACCCTGATCATATTGCTGA
TGTTGCAAATGAGCCTGACCCTGATCATGCTGATGTTGCTAATGACGTTGGAGCTAACAAAAACAACACTGACGACGACGATGAAAATCTTGGTTATAAAAATTACGGCA
AGGGTTCCGACACTGAAACTCACCGTTACTTCTCGAGCGATAAGCCATACAGACCCTAGAAAAGCTTTTAAAGATCATCATCATCCGTTGTCGTCACCGTCACCGTCGCC
ATCGTCTTATCAGGTAGTCAATTGTAAAGAAGAAAAAAATGAATGTGTTTTATTCTCTTGTAATAAAGTGGAATGTGCATGGAATGTTTGCTGAAGAGCCTAAGGTGAAA
GAGATGGTTAGCTGAGGCATGCAAAGCTTTCGCATTTCACAGAGTTTGATGTTTATTGTGTGTTGTGAAAAATATTATGAATAATGTGGATGAAATTAAGATATATGTGT
ATCATAATTTTATGTTATGGTGTCATGTTATGATTTGGCTTTGTATTTATTCTATGAAACAGAAGATGCTTAATACTATATAAAGTTGGTGATGATCTTAATCTTCTTAT
TACTAAA
Protein sequenceShow/hide protein sequence
MIMMKRVLLLFAALLLLLMADAAMHDVVDKKHTRKLAQGFGGGRTPETRVFYVENKPHPDHIADVANEPDPDHADVANDVGANKNNTDDDDENLGYKNYGKGSDTETHRY
FSSDKPYRP