; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G05720 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G05720
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAcyl carrier protein
Genome locationClcChr06:5879117..5883176
RNA-Seq ExpressionClc06G05720
SyntenyClc06G05720
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0000036 - acyl carrier activity (molecular function)
GO:0031177 - phosphopantetheine binding (molecular function)
InterPro domainsIPR003231 - Acyl carrier protein (ACP)
IPR006162 - Phosphopantetheine attachment site
IPR009081 - Phosphopantetheine binding ACP domain
IPR036736 - ACP-like superfamily
IPR044813 - Acyl carrier protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458496.1 PREDICTED: acyl carrier protein 1, chloroplastic-like [Cucumis melo]1.2e-5791.55Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSVSMPSLSASF QSQV+S +ISG KLV APLG+AIFPLRRN RQGSLQVCCAAKPETVNKVVEIVRKQLAL EDSKVDGESKF +LGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
        VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA

XP_011656665.1 acyl carrier protein 1, chloroplastic [Cucumis sativus]5.1e-5689.44Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSVSMPSLSAS  +SQV+S RISG KLV APLG+AIFPLRRN R GSLQVCCAAKPETV+KVVEIVRKQLALAEDSKV+GESKF++LGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
        VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA

XP_022959041.1 acyl carrier protein 1, chloroplastic-like [Cucurbita moschata]2.6e-5284.29Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSV MPS+SASFK SQVS+ RISG KLVSAPLG+AIFPLRRN RQGSLQVCCAAKPET++KVV+IV+KQLAL EDS V+GESKFSELGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD
        VEIVMGLEE FKI+VEEESAQ+ITTVQEAAD+IE +ISKD
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD

XP_023547704.1 acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.2e-5385Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSVSMPS+SASFK SQVS+ RISG KLVSAPLG+AIFPLRRN RQGSLQVCCAAKPET++KVV+IV+KQLAL EDS V+GESKFSELGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD
        VEIVMGLEE FKI+VEEESAQ+ITTVQEAAD+IE +ISKD
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD

XP_038876091.1 acyl carrier protein 1, chloroplastic-like [Benincasa hispida]9.6e-5589.51Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSS+SMPSL+A    SQVS  RISG KL SAPLGRAIFPLRRN RQGSLQVCCAAKPETVNKVVEIVRKQLALAEDS V+GESKFSELGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSAA
        VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDS+A
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSAA

TrEMBL top hitse value%identityAlignment
A0A0A0K8V5 Acyl carrier protein2.5e-5689.44Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSVSMPSLSAS  +SQV+S RISG KLV APLG+AIFPLRRN R GSLQVCCAAKPETV+KVVEIVRKQLALAEDSKV+GESKF++LGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
        VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA

A0A1S3C7Z5 Acyl carrier protein5.8e-5891.55Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSVSMPSLSASF QSQV+S +ISG KLV APLG+AIFPLRRN RQGSLQVCCAAKPETVNKVVEIVRKQLAL EDSKVDGESKF +LGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
        VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA

A0A5A7SWA3 Acyl carrier protein5.8e-5891.55Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSVSMPSLSASF QSQV+S +ISG KLV APLG+AIFPLRRN RQGSLQVCCAAKPETVNKVVEIVRKQLAL EDSKVDGESKF +LGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
        VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA

A0A6J1H3R9 Acyl carrier protein1.3e-5284.29Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+AGSSV MPS+SASFK SQVS+ RISG KLVSAPLG+AIFPLRRN RQGSLQVCCAAKPET++KVV+IV+KQLAL EDS V+GESKFSELGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD
        VEIVMGLEE FKI+VEEESAQ+ITTVQEAAD+IE +ISKD
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD

A0A6J1KZZ3 Acyl carrier protein3.1e-5183.57Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        MFS+A SSVSMPS+SASFK SQVS+ RISG KLVSAPLG+AIFPLRRN RQGSLQV CAAKPET++KVV+IV+KQLAL EDS V+GESKFSELGADSLDT
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD
        VEIVMGLEE FKI+VEEESAQ+ITTVQEAAD+IE +ISKD
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKD

SwissProt top hitse value%identityAlignment
P52411 Acyl carrier protein 1, chloroplastic1.9e-2961.59Show/hide
Query:  SVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFP-LRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTV
        + AG+S+ +   SASF  S ++  RIS  + VS P+ R  FP L+ +    +L+V C AKPETV KV  IV+KQLAL +DS+V+G SKFS LGADSLDTV
Subjt:  SVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFP-LRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTV

Query:  EIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISK
        EIVMGLEEEF ISVEEESAQSI TVQ+AADLIE L+ K
Subjt:  EIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISK

P52412 Acyl carrier protein 2, chloroplastic3.6e-2862.41Show/hide
Query:  SSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMG
        SS+ + S S     S ++  RIS  + VS P+ R  F  RR     SL+V C AKPETV KV  IV+KQLAL +DS V G SKFS LGADSLDTVEIVMG
Subjt:  SSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMG

Query:  LEEEFKISVEEESAQSITTVQEAADLIEDLISK
        LEEEF ISVEEESAQSI TVQ+AADLIE L+ K
Subjt:  LEEEFKISVEEESAQSITTVQEAADLIEDLISK

P52413 Acyl carrier protein 3, chloroplastic2.2e-3062.77Show/hide
Query:  SVAGSS-VSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQG-SLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT
        + AGSS + + S S S  ++QV S  +S  + VS P+   IFP  R+ R   S +VCC AK ETV +V EIV+KQLAL EDS+V+G SKFS LGADSLDT
Subjt:  SVAGSS-VSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQG-SLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT

Query:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLI
        VEIVMGLEEEF ISVEEESAQSI TVQ+AADLIE L+
Subjt:  VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLI

P52414 Acyl carrier protein 4, chloroplastic5.0e-3059.85Show/hide
Query:  SVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVE
        + AG+S+ + S S     S ++  RIS  + VS P+ R  FP  R+ +    +V C AKPETV KV  IV+KQLAL +DS+V+G SKFS LGADSLDTVE
Subjt:  SVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVE

Query:  IVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISK
        IVMGLEEEF ISVEEESAQSI TVQ+AADLIE L+ K
Subjt:  IVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISK

P93092 Acyl carrier protein 1, chloroplastic2.8e-3364.08Show/hide
Query:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPL-GRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLD
        M SV G+S+SM S  AS   S+VS+ R      VS P+ G++  PLR  +R     VCCAAKPETV KV  IV+KQLAL +DS V GESKF+ LGADSLD
Subjt:  MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPL-GRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLD

Query:  TVEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDS
        TVEIVMGLEEEF I+VEEESAQSI TVQ+AADLIE LI K S
Subjt:  TVEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDS

Arabidopsis top hitse value%identityAlignment
AT1G54580.1 acyl carrier protein 23.9e-2253.03Show/hide
Query:  MPSLSASFK---QSQVSSARISGSKLVSAPLGRAIFPLRRNLRQ--GSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVM
        M S++AS     Q++     I+ S++ S   GR    L  NLRQ    L V CAAKPETV+KV  +VRKQL+L E  ++   +KF+ LGADSLDTVEIVM
Subjt:  MPSLSASFK---QSQVSSARISGSKLVSAPLGRAIFPLRRNLRQ--GSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVM

Query:  GLEEEFKISVEEESAQSITTVQEAADLIEDLI
        GLEEEF I + EE AQSI TV++AA LIE+L+
Subjt:  GLEEEFKISVEEESAQSITTVQEAADLIEDLI

AT3G05020.1 acyl carrier protein 11.9e-2452.31Show/hide
Query:  SLSASFKQSQVSSARISGSK---LVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMGLEE
        S S S + S +++ RIS  K   + +       F LRR++    L V CAAK ET+ KV  IV+KQL+L  D KV  E+KF++LGADSLDTVEIVMGLEE
Subjt:  SLSASFKQSQVSSARISGSK---LVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMGLEE

Query:  EFKISVEEESAQSITTVQEAADLIEDLISK
        EF I + EE AQ I TV++AA+LIE+LI++
Subjt:  EFKISVEEESAQSITTVQEAADLIEDLISK

AT4G25050.1 acyl carrier protein 45.8e-2654.01Show/hide
Query:  SSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMG
        +S+S  SLS     + +S      S   S   GR       + +   LQ+ CAAK ETV KV +IV++QLALA D  +  ESKFS LGADSLDTVEIVM 
Subjt:  SSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMG

Query:  LEEEFKISVEEESAQSITTVQEAADLIEDLISKDSAA
        LEE+F ISVEE  AQ+ITT+QEAADLIEDL+ K  AA
Subjt:  LEEEFKISVEEESAQSITTVQEAADLIEDLISKDSAA

AT4G25050.2 acyl carrier protein 42.7e-2349.66Show/hide
Query:  SSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT------
        +S+S  SLS     + +S      S   S   GR       + +   LQ+ CAAK ETV KV +IV++QLALA D  +  ESKFS LGADSLDT      
Subjt:  SSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDT------

Query:  ------VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSAA
              VEIVM LEE+F ISVEE  AQ+ITT+QEAADLIEDL+ K  AA
Subjt:  ------VEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSAA

AT5G27200.1 acyl carrier protein 57.1e-2462Show/hide
Query:  FPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA
        F LRR L    L V CA K ETV KV EIV+KQL+L +D KV   +KF+ELGADSLDTVEIVMGLEEEF I++ EE A+ I TVQ+AA+LIE+L+ + +A
Subjt:  FPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMGLEEEFKISVEEESAQSITTVQEAADLIEDLISKDSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCGTCGCTGGATCTTCGGTTTCCATGCCTTCTCTCTCTGCTTCTTTCAAGCAAAGCCAGGTGTCAAGCGCCAGGATCTCAGGTTCGAAATTAGTTTCCGCGCC
TTTAGGCAGGGCTATTTTTCCATTACGAAGGAACCTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGCTAAGCCAGAGACAGTGAACAAGGTGGTTGAAATTGTGAGGA
AACAGCTTGCTTTAGCTGAAGATTCTAAGGTCGATGGAGAATCAAAGTTTTCTGAGCTCGGAGCTGATTCTCTTGATACGGTTGAGATAGTGATGGGGCTGGAAGAGGAA
TTTAAGATCAGCGTTGAAGAAGAGAGCGCCCAGAGCATCACCACCGTCCAAGAGGCTGCCGATCTGATTGAGGACCTCATTTCTAAGGATTCCGCTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCGTCGCTGGATCTTCGGTTTCCATGCCTTCTCTCTCTGCTTCTTTCAAGCAAAGCCAGGTGTCAAGCGCCAGGATCTCAGGTTCGAAATTAGTTTCCGCGCC
TTTAGGCAGGGCTATTTTTCCATTACGAAGGAACCTCAGGCAGGGAAGCCTTCAGGTTTGCTGTGCGGCTAAGCCAGAGACAGTGAACAAGGTGGTTGAAATTGTGAGGA
AACAGCTTGCTTTAGCTGAAGATTCTAAGGTCGATGGAGAATCAAAGTTTTCTGAGCTCGGAGCTGATTCTCTTGATACGGTTGAGATAGTGATGGGGCTGGAAGAGGAA
TTTAAGATCAGCGTTGAAGAAGAGAGCGCCCAGAGCATCACCACCGTCCAAGAGGCTGCCGATCTGATTGAGGACCTCATTTCTAAGGATTCCGCTGCCTAA
Protein sequenceShow/hide protein sequence
MFSVAGSSVSMPSLSASFKQSQVSSARISGSKLVSAPLGRAIFPLRRNLRQGSLQVCCAAKPETVNKVVEIVRKQLALAEDSKVDGESKFSELGADSLDTVEIVMGLEEE
FKISVEEESAQSITTVQEAADLIEDLISKDSAA