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Clc06G05800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G05800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:5926421..5939658
RNA-Seq ExpressionClc06G05800
SyntenyClc06G05800
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033454.1 hypothetical protein E6C27_scaffold111G001150 [Cucumis melo var. makuwa]1.6e-2672.83Show/hide
Query:  LTHNVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETRED
        L+  +EMKFLGWYVKIGTVS LIGASME+FMIKTGF              YDKVTV+ESE+LAWENSPEAQAIREALNPWRN DAAAE R+D
Subjt:  LTHNVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETRED

KAG7013616.1 hypothetical protein SDJN02_23783 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2772.92Show/hide
Query:  MKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLF---------PPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT
        MKFLGWYVKIGTVS LIGASMEMFMIKTGFC+  +L             S  R DKVTVLESEK+AWENSPEAQAIREALNPWRN DAA E R+DT
Subjt:  MKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLF---------PPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT

XP_023006006.1 uncharacterized protein LOC111498883 [Cucurbita maxima]4.3e-2776.67Show/hide
Query:  NVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT
        +VEMKFLGWYVKIGTVS LIGASMEMFMIKTGF              YDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA E R+DT
Subjt:  NVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT

XP_023548311.1 uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo]7.3e-2777.53Show/hide
Query:  VEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT
        VEMKFLGWYVKIGTVS LIGASMEMFMIKTGF              YDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA E R+DT
Subjt:  VEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT

XP_038906919.1 uncharacterized protein LOC120092786 [Benincasa hispida]1.6e-2679.31Show/hide
Query:  MKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT
        MKFLGWYVKIGTVS LIGASMEMFMIKTGF              YDKVTVLESEKLAWENSPEAQAIREALNPWRN DAAAE R+DT
Subjt:  MKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT

TrEMBL top hitse value%identityAlignment
A0A5A7SQJ1 Uncharacterized protein7.9e-2772.83Show/hide
Query:  LTHNVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETRED
        L+  +EMKFLGWYVKIGTVS LIGASME+FMIKTGF              YDKVTV+ESE+LAWENSPEAQAIREALNPWRN DAAAE R+D
Subjt:  LTHNVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETRED

A0A5N5LZ46 Uncharacterized protein2.4e-2375Show/hide
Query:  VEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSD
        VEMKFL WYVKI     LIGASME+FMIKTGFCVRT+L       +YDKVTVLESEK AWE+SPEAQAIREALNPWRN +
Subjt:  VEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSD

A0A6J1CA87 uncharacterized protein LOC1110097365.7e-2571.91Show/hide
Query:  NVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETRED
        +V+MKFL WYVKIG VS LIGASMEMFMIKTGF              YDKVTVLESEKLAWENSPEAQA+REALNPWRN DA AE ++D
Subjt:  NVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETRED

A0A6J1H837 uncharacterized protein LOC1114604203.9e-2677.01Show/hide
Query:  MKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT
        MKFLGWYVKIGTVS LIGASMEMFMIKTGF              YDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA E R+DT
Subjt:  MKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT

A0A6J1KWK7 uncharacterized protein LOC1114988832.1e-2776.67Show/hide
Query:  NVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT
        +VEMKFLGWYVKIGTVS LIGASMEMFMIKTGF              YDKVTVLESEK+AWENSPEAQAIREALNPWRN DAA E R+DT
Subjt:  NVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDAAAETREDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G62450.1 unknown protein1.0e-1858.02Show/hide
Query:  VEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDA
        ++ +FL WY+KI   S +IG  ME FMIKTGF              YDKVTV+E+E+ A ENSPEAQAIREALNPWRN DA
Subjt:  VEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNPWRNSDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACGAAAGGTGGCAAGCTTGCGGAGGCTGGTTATAATGAGCAACATCAATTGATGAAATCTAAGGAGAGTGAGAGAGATGACATGCGACTTACCCACAATGTTGA
AATGAAGTTTCTAGGTTGGTATGTGAAGATTGGGACAGTTTCAGTTTTGATTGGAGCTTCCATGGAAATGTTCATGATTAAAACGGGCTTCTGTGTGAGAACCCTCCTTT
TTCCTCCTTCCTCAATTCACCGTTATGATAAAGTAACAGTTTTAGAGTCGGAGAAGCTGGCTTGGGAAAATTCTCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCT
TGGAGAAACAGCGATGCTGCTGCAGAGACCAGGGAAGACACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACGAAAGGTGGCAAGCTTGCGGAGGCTGGTTATAATGAGCAACATCAATTGATGAAATCTAAGGAGAGTGAGAGAGATGACATGCGACTTACCCACAATGTTGA
AATGAAGTTTCTAGGTTGGTATGTGAAGATTGGGACAGTTTCAGTTTTGATTGGAGCTTCCATGGAAATGTTCATGATTAAAACGGGCTTCTGTGTGAGAACCCTCCTTT
TTCCTCCTTCCTCAATTCACCGTTATGATAAAGTAACAGTTTTAGAGTCGGAGAAGCTGGCTTGGGAAAATTCTCCTGAGGCTCAAGCAATTAGAGAAGCCCTCAATCCT
TGGAGAAACAGCGATGCTGCTGCAGAGACCAGGGAAGACACCTAATGCTTCACTGCTGATTGGAGTAGTTGGTTTGCAAGGTGGAGAAAAATAATTACGAGGGAATCGGA
TTGAGAGATATGCAAGCACAGGCTTTTAAGTTTCAACTAGTAAGAGGGAGGGGGGATTTTAGAAAGCTGTTTCTTCATGACATTAGAGGTTTACTTATGATTGATTCCAT
ATTAAAATTGAATGATATCACCAAGCTGAAGGTCTGATAATTCAATTAATTAGAAAACCCTTTTTTGTTGGGTAGAAATATGAAGGATTTTCATATAGTCTGAAACCATA
TTAGAGAATCATGATCCCATTTTCTGGACTGTCATTCCAATTCTCTTGAACTCATCATGCCTCTTGGACTATATTCCTTTGGTTCTACTTTTTGACTCAAAACCTACCAG
ATGAGTTGTTCAGTACACCATAGTTGAAAATATTTCTTAGGTGAAAGAAAAAGATAGTTGTCTAACAATCGTTCTGAATCTTATTTTGGTCAACCTTTCACACTAATCCA
GATTTACTTTTTTTTT
Protein sequenceShow/hide protein sequence
MLTKGGKLAEAGYNEQHQLMKSKESERDDMRLTHNVEMKFLGWYVKIGTVSVLIGASMEMFMIKTGFCVRTLLFPPSSIHRYDKVTVLESEKLAWENSPEAQAIREALNP
WRNSDAAAETREDT