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Clc06G05810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G05810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr06:5945181..5952196
RNA-Seq ExpressionClc06G05810
SyntenyClc06G05810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY36063.1 hypothetical protein CUMW_020050 [Citrus unshiu]2.9e-0537.23Show/hide
Query:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE
        D SSF L E+SADSEVD L       +   A  D++DA SCSC+             D ++ +  DDGDG           D  RQ + G + +  + + 
Subjt:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE

Query:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA
         ++EEE SS ++G+ +N      DEMED+LFW+TCMA
Subjt:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA

KAA0033453.1 hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]1.4e-4479.7Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRSPDLQDDGD-GDRD-QAAIGLIGDGERQRSGTALEYSYKEE
        MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDACSCSC  NDF+ DDLR+ D QDDGD GDRD    I LIGDG R+RSG AL+Y Y+EE
Subjt:  MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRSPDLQDDGD-GDRD-QAAIGLIGDGERQRSGTALEYSYKEE

Query:  EEEEEEESSNNVGVIHNTDEMEDKLFWDTCMAG
        EEEEEEESS++VGVI N +EMEDKLFWDTCMAG
Subjt:  EEEEEEESSNNVGVIHNTDEMEDKLFWDTCMAG

KAE8646684.1 hypothetical protein Csa_005604 [Cucumis sativus]4.6e-2768.91Show/hide
Query:  SADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSPDLQDDGDGDRDQAAIGLIGDGERQRSGTALEYSYKEEEEEEEEESSNN-VGV
        SADSEVD+LLSH PH+LESAV   DDQEDACSCSC  NDF+ DD +     D+GDGD+D   IGLIGDG R+RSG      Y+EEEEEEEEESSNN VG 
Subjt:  SADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSPDLQDDGDGDRDQAAIGLIGDGERQRSGTALEYSYKEEEEEEEEESSNN-VGV

Query:  IHNTDEMEDKLFWDTCMAG
        I N +EMEDK+FWDTCMAG
Subjt:  IHNTDEMEDKLFWDTCMAG

KAG6575041.1 hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3366.41Show/hide
Query:  IKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSPDLQDDGDGDRDQAAIGLIGD-------GERQRSGTALEYSYKEEEE
        + +ASS FLWED+ADSEVDRLLSHPH+LESAVDD EDA SCSC+D+AT D  + DLQDDGDGD D+ A+G  GD        E + SG  LEYS  EE+E
Subjt:  IKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSPDLQDDGDGDRDQAAIGLIGD-------GERQRSGTALEYSYKEEEE

Query:  EEEEESSNNVGVIHNTDEMEDKLFWDTCMAG
        EEEEES+NNVG I + +EMEDKLFWDTCM G
Subjt:  EEEEESSNNVGVIHNTDEMEDKLFWDTCMAG

KDO74975.1 hypothetical protein CISIN_1g032474mg [Citrus sinensis]2.2e-0536.5Show/hide
Query:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE
        D SSF L E+SADSEVD L       +   A  D++DA SCSC+             +L++ +  DDGDG           D  RQ +  ++ +  + + 
Subjt:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE

Query:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA
         ++EEE SS ++G+ +N      DEMED+LFW+TCMA
Subjt:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA

TrEMBL top hitse value%identityAlignment
A0A067G8N3 Uncharacterized protein1.1e-0536.5Show/hide
Query:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE
        D SSF L E+SADSEVD L       +   A  D++DA SCSC+             +L++ +  DDGDG           D  RQ +  ++ +  + + 
Subjt:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE

Query:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA
         ++EEE SS ++G+ +N      DEMED+LFW+TCMA
Subjt:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA

A0A0A0KBF3 Uncharacterized protein1.2e-3672.39Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSPDLQDDGDGDRDQAAIGLIGDGERQRSGTALEYSYKEE
        MDQIKDASSFFLWEDSADSEVD+LLSH PH+LESAV   DDQEDACSCSC  NDF+ DD +     D+GDGD+D   IGLIGDG R+RSG      Y+EE
Subjt:  MDQIKDASSFFLWEDSADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSPDLQDDGDGDRDQAAIGLIGDGERQRSGTALEYSYKEE

Query:  EEEEEEESSNN-VGVIHNTDEMEDKLFWDTCMAG
        EEEEEEESSNN VG I N +EMEDK+FWDTCMAG
Subjt:  EEEEEEESSNN-VGVIHNTDEMEDKLFWDTCMAG

A0A2H5N748 Uncharacterized protein1.4e-0537.23Show/hide
Query:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE
        D SSF L E+SADSEVD L       +   A  D++DA SCSC+             D ++ +  DDGDG           D  RQ + G + +  + + 
Subjt:  DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLRSPDLQDDGDGDRDQAAIGLIGDGERQRS-GTALEYSYKEE

Query:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA
         ++EEE SS ++G+ +N      DEMED+LFW+TCMA
Subjt:  EEEEEEESSNNVGVIHN-----TDEMEDKLFWDTCMA

A0A5A7SSL9 Uncharacterized protein6.9e-4579.7Show/hide
Query:  MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRSPDLQDDGD-GDRD-QAAIGLIGDGERQRSGTALEYSYKEE
        MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDACSCSC  NDF+ DDLR+ D QDDGD GDRD    I LIGDG R+RSG AL+Y Y+EE
Subjt:  MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRSPDLQDDGD-GDRD-QAAIGLIGDGERQRSGTALEYSYKEE

Query:  EEEEEEESSNNVGVIHNTDEMEDKLFWDTCMAG
        EEEEEEESS++VGVI N +EMEDKLFWDTCMAG
Subjt:  EEEEEEESSNNVGVIHNTDEMEDKLFWDTCMAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAATCAAAGATGCTTCCTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTG
GATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCCTGATTTGCAAGATGATGGGGATGGTGATCGAGATCAAGCT
GCCATTGGTTTGATCGGTGATGGTGAAAGGCAGCGGAGCGGGACCGCGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGGAAGAAGAAGAGTCGAGTAATAAT
GTGGGTGTGATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGTATGGCGGGTAGCGAGTGTGTTCGGGACGCCTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAACAATTTTTTATTTTATTCCTTATATTACTGCAAAACAACCGCCAAAATTTATTTTTTATTATTTATAATAATCATCATATATGGACCAAATCAAAGA
TGCTTCCTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGC
TTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCCTGATTTGCAAGATGATGGGGATGGTGATCGAGATCAAGCTGCCATTGGTTTGATCGG
TGATGGTGAAAGGCAGCGGAGCGGGACCGCGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGGAAGAAGAAGAGTCGAGTAATAATGTGGGTGTGATTCATAA
TACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGTATGGCGGGTAGCGAGTGTGTTCGGGACGCCTAGCCTACAGAAGTTTCTCGTCTGGGCCTACCTTG
AAGCAGACCTCTGGGATAGTTGTAAATATTCAGTTTACGTCCATATTTTGTAATGTACATGTTCCTTATGAGTGCTGGGAGAATCATTTTGTATTACATTCATAT
ATATAGAATACTTGACGAAAGGTTGTATGTTATCGAATGTCTTAATAGTAATGGTGTTTCTATTTGGGATTAAACTGGCATTTAGTTTTAATATGGTATATAGAG
AGTGCGGTTTCACACTCACTCCTAGGTATAAGGAGTATCTGGGATGGGGTGTGACAGAAGTTCTGTCCTCTTCACGGTGATGGTCGTGAAAGAATATCAACATAG
TAGTTAATAGACAATTTTTTTAAGCTCA
Protein sequenceShow/hide protein sequence
MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSPDLQDDGDGDRDQAAIGLIGDGERQRSGTALEYSYKEEEEEEEEESSNN
VGVIHNTDEMEDKLFWDTCMAGSECVRDA