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Clc06G05850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G05850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like
Genome locationClcChr06:5998712..6000437
RNA-Seq ExpressionClc06G05850
SyntenyClc06G05850
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593937.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_004135555.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]2.4e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIA KCRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_022930219.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]1.1e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_022958837.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]1.1e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_038893587.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida]8.4e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS V+AAGDPIPTSAV+MSSSKHIANKCRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

TrEMBL top hitse value%identityAlignment
A0A5A7UKJ4 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 8-B-like1.2e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIA KCRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1EWD6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1H2X4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1KIR7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1KXR2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

SwissProt top hitse value%identityAlignment
Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B1.8e-0462.86Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        M+S VDA G+PIPTSAV+ +S+KHI  +C  ENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

Arabidopsis top hitse value%identityAlignment
AT3G06310.1 Cox19-like CHCH family protein9.3e-0454.55Show/hide
Query:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        + VD  G+PIPTSAV+ +S+KHI  +C  EN+A
Subjt:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT3G06310.2 Cox19-like CHCH family protein9.3e-0454.55Show/hide
Query:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        + VD  G+PIPTSAV+ +S+KHI  +C  EN+A
Subjt:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT3G06310.3 Cox19-like CHCH family protein9.3e-0454.55Show/hide
Query:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        + VD  G+PIPTSAV+ +S+KHI  +C  EN+A
Subjt:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT5G18800.1 Cox19-like CHCH family protein1.3e-0562.86Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        M+S VDA G+PIPTSAV+ +S+KHI  +C  ENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT5G18800.2 Cox19-like CHCH family protein1.3e-0562.86Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        M+S VDA G+PIPTSAV+ +S+KHI  +C  ENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGTAGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCAGTGGTAATGTCCTCATCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTGGCTGTGGC
ATACCCTCCATTGCAAACACAAGGATTCCAACCCGGGGAAATGCCTCCACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTTGGAATCCCAAAGAAGGTTAGAA
GTTTTCGCCCGACATTTTTGCATGTGAAAATCAACACTTTGGATCACATTCAGAGGCGTTCCCCTGTGTATTTGGCGTTGCAATGGTGTGTTTGTGCAGAGGAGATTCAA
AGGATCTTGATAATTTATTTTGGAATTGTCAGTTCGTGCAATTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTCATGGTGAAATTAGGAATTGATGAAACTAGAGAGAGATGGCGAGCGTAGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCAGTGGTAATGTCCTCATCAAAG
CACATTGCGAACAAGTGTCGATCGGAGAATGTGGCTGTGGCATACCCTCCATTGCAAACACAAGGATTCCAACCCGGGGAAATGCCTCCACAAAGGCCATCAAGTCACTC
GATGCGTCCTCTCCCTGTTGGAATCCCAAAGAAGGTTAGAAGTTTTCGCCCGACATTTTTGCATGTGAAAATCAACACTTTGGATCACATTCAGAGGCGTTCCCCTGTGT
ATTTGGCGTTGCAATGGTGTGTTTGTGCAGAGGAGATTCAAAGGATCTTGATAATTTATTTTGGAATTGTCAGTTCGTGCAATTGA
Protein sequenceShow/hide protein sequence
MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVAVAYPPLQTQGFQPGEMPPQRPSSHSMRPLPVGIPKKVRSFRPTFLHVKINTLDHIQRRSPVYLALQWCVCAEEIQ
RILIIYFGIVSSCN