CuGenDBv2

Gene ID	Clc06G05920
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Proline-rich nuclear receptor coactivator
Genome location	ClcChr06:6072692..6073958
RNA-Seq Expression	Clc06G05920
Synteny	Clc06G05920
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575030.1 hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sororia]

9.8e-92

94.71

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL
        MGTEILRPQDCLIERIRVPPA  CRRRSSYGNYDSNV NYNSRSNRK+ ARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL

Query:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        DSKIKSEALKKEGDNLVVCGT+RLGPAPEM+PKQIRIVDVRC I+GKADVYAGSAFSMSP PSSLPLPSFSKKKHVSTIVDDSATRDLR
Subjt:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

KAG6593932.1 hypothetical protein SDJN03_13408, partial [Cucurbita argyrosperma subsp. sororia]

6.6e-80

86.77

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL
        MGTEILRPQDCL  RI VP  A CRRR SYGN DSNVYNYNSRSNRKS ARS+RPEQRKRFVSN SEPSVSKRSSS+D K   NSLVME VTILRRGESL
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL

Query:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        DSK K EALKKE DNLVVCGT+RLGPAPEMV KQIRIVDVRC I GKADVYAGSAFSMSPSPSSLPLPSFSKKK VSTIVDDSATRDLR
Subjt:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

XP_004144965.1 uncharacterized protein LOC101217755 [Cucumis sativus]

9.5e-87

92.23

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVARS---ERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
        MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+  NYN RSNRKSVARS   ERPEQRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVARS---ERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR

Query:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        GESLDSKIKSEALKKEGDN+VVCGTDRLGPAPE V KQIRIVDVR  IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVS IVDDSATRDLR
Subjt:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

XP_008458522.1 PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo]

1.7e-88

93.26

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVA---RSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
        MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+  NYN RSNRKSVA   RSERPEQRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVA---RSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR

Query:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        GESLDSKIKSEALKKEGDN+VVCGTDRLGPAPE V KQIRIVDVRC IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
Subjt:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

XP_022138318.1 uncharacterized protein LOC111009532 [Momordica charantia]

3.7e-83

90.1

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSN-VYNYNSRSNRKS--VARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRG
        MGTEILRPQDCLIERIRVPPAA+CRRRSSYGN DS+ VY+YN RSNRKS   AR ERPEQ+KRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRG
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSN-VYNYNSRSNRKS--VARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRG

Query:  ESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        ESLDSK KSEALKKEGDNLVVCGT+RLGPAPEMVPKQIRIVDVRC I   +DVYAGSAFSMSPSPSSLPLPSFSKKK VSTIVDDSATRDLR
Subjt:  ESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCP9 Uncharacterized protein

4.6e-87

92.23

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVARS---ERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
        MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+  NYN RSNRKSVARS   ERPEQRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVARS---ERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR

Query:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        GESLDSKIKSEALKKEGDN+VVCGTDRLGPAPE V KQIRIVDVR  IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVS IVDDSATRDLR
Subjt:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

A0A1S3C7J3 uncharacterized protein LOC103497904

8.4e-89

93.26

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVA---RSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
        MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+  NYN RSNRKSVA   RSERPEQRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVA---RSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR

Query:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        GESLDSKIKSEALKKEGDN+VVCGTDRLGPAPE V KQIRIVDVRC IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
Subjt:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

A0A5A7SWA1 Uncharacterized protein

8.4e-89

93.26

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVA---RSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
        MGTEILRPQDCLIERIRVPPAA CRRRSSYGNYDSN+  NYN RSNRKSVA   RSERPEQRKRFV NHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNV-YNYNSRSNRKSVA---RSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRR

Query:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        GESLDSKIKSEALKKEGDN+VVCGTDRLGPAPE V KQIRIVDVRC IAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
Subjt:  GESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

A0A6J1CCP9 uncharacterized protein LOC111009532

1.8e-83

90.1

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSN-VYNYNSRSNRKS--VARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRG
        MGTEILRPQDCLIERIRVPPAA+CRRRSSYGN DS+ VY+YN RSNRKS   AR ERPEQ+KRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRG
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSN-VYNYNSRSNRKS--VARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRG

Query:  ESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        ESLDSK KSEALKKEGDNLVVCGT+RLGPAPEMVPKQIRIVDVRC I   +DVYAGSAFSMSPSPSSLPLPSFSKKK VSTIVDDSATRDLR
Subjt:  ESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

A0A6J1EX01 uncharacterized protein LOC111436920

2.7e-79

86.24

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL
        MGTEILRPQDCL  RI VP  A CRRR SYGN DSNV NYNSRSNRKS ARS+RPEQRKRFVSN SEPSVSKRSSS+D K   NSLVME VTILRRGESL
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL

Query:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR
        DSK K EALKKE DNLVVCGT+RLGPAPEMV KQIRIVDVRC I GKADVYAGSAFSMSPSPSSLPLPSFSKKK VSTIVDDSATRDLR
Subjt:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G21570.1 unknown protein

4.3e-13

33.51

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Query:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL
        MGTEI+RPQ+CL++R+R  PA                  +NSR N        +P+QR+RF              SD+ +    ++V       R+GES 
Subjt:  MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESL

Query:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSA-FSMSPSPSSLPLPSFSKKKHVSTIV----DDSATRDLR
        DS    +  K                +PE+                  D+YAGS+ F++SP+PSSLPLPSFSKKK  S +V    DDSA++DLR
Subjt:  DSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSA-FSMSPSPSSLPLPSFSKKKHVSTIV----DDSATRDLR

AT4G32020.1 unknown protein

3.8e-09

29.03

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Query:  MGTEILRPQDCL------IERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTIL
        MG  +L PQDCL      +++ R P A   R++ +  N  +      S+S+R S      P    R   +   P  + +      K++ N++ + +V IL
Subjt:  MGTEILRPQDCL------IERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTIL

Query:  RRGESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIV
        +RGE +  K  S+ + +  D   +  T R+GP P ++P QIR+   +   +  A  YAG     SP PS +PLP+F  KK  + ++
Subjt:  RRGESLDSKIKSEALKKEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIV

Sequences

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CDS sequence

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ATGGGGACTGAGATCCTACGGCCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGATTTGTCGCCGGAGGAGTTCTTATGGAAACTATGACTCGAATGT
TTACAACTATAATTCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGGCCGGAGCAGCGGAAGCGGTTTGTTTCGAATCACTCCGAGCCGTCGGTCTCAAAGAGAT
CGAGTTCCGACGATTTGAAAGCAATGAAAAATAGTTTGGTGATGGAGAAGGTTACGATCTTGAGGCGAGGTGAATCGCTCGATTCGAAGATCAAGAGCGAAGCTCTGAAG
AAGGAAGGTGATAATCTTGTCGTGTGTGGGACCGATAGGTTGGGACCGGCGCCGGAAATGGTTCCGAAACAGATACGGATTGTCGACGTTCGGTGTTCGATAGCCGGAAA
AGCCGATGTTTACGCCGGGTCGGCGTTTTCGATGTCGCCGTCCCCAAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACATGTATCCACCATCGTTGACGACTCGG
CTACCAGAGATCTGAGGCATCGGAAAATCGAGCCAACGAGACAGTTCTTCCCTTCCCCCTTTCCACTTCAATTTATTCTTCCACGGCTGAAATTTCCGCCATTAAAGACC
ATCTTGCGTTCTTCATATCAGTTCTATGATCACAATCGAAGGATATCCAATCAAATTCAGGCAAAGCACAGAAATTAA

mRNA sequence

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Protein sequence

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MGTEILRPQDCLIERIRVPPAAICRRRSSYGNYDSNVYNYNSRSNRKSVARSERPEQRKRFVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALK
KEGDNLVVCGTDRLGPAPEMVPKQIRIVDVRCSIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLRHRKIEPTRQFFPSPFPLQFILPRLKFPPLKT
ILRSSYQFYDHNRRISNQIQAKHRN

Clc06G05920 (gene) of Watermelon (cordophanus) v2 genome