; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G05930 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G05930
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCytochrome c oxidase assembly factor 4-like protein
Genome locationClcChr06:6076370..6078484
RNA-Seq ExpressionClc06G05930
SyntenyClc06G05930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153368.1 cytochrome c oxidase assembly factor 4 homolog, mitochondrial isoform X2 [Cucumis sativus]6.5e-2192.59Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPPISPENQPPLHRSDA+D+DENVKQLNECSSFYLSLQDCLIKTNRNW +CQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
XP_008458528.1 PREDICTED: cytochrome c oxidase assembly factor 4 homolog, mitochondrial [Cucumis melo]1.9e-2090.74Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPPISPEN+PPLHRSDA+D+DENVKQLNECSSFYLSLQDCLIKTNRNW +CQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
XP_011656645.1 uncharacterized protein LOC101215408 isoform X1 [Cucumis sativus]6.5e-2192.59Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPPISPENQPPLHRSDA+D+DENVKQLNECSSFYLSLQDCLIKTNRNW +CQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
XP_022138658.1 uncharacterized protein LOC111009761 [Momordica charantia]1.6e-1973.44Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLN
        MGKPP+SPENQPP HRSDA+DDDENV+QLNECSS YLSLQ+CLIKT+RNW ACQ  +  +   N
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLN
XP_038874602.1 uncharacterized protein LOC120067191 [Benincasa hispida]2.9e-2196.3Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPP SPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNW ACQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
TrEMBL top hitse value%identityAlignment
A0A0A0KEH3 Uncharacterized protein3.2e-2192.59Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPPISPENQPPLHRSDA+D+DENVKQLNECSSFYLSLQDCLIKTNRNW +CQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
A0A1S3C8M5 cytochrome c oxidase assembly factor 4 homolog, mitochondrial9.2e-2190.74Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPPISPEN+PPLHRSDA+D+DENVKQLNECSSFYLSLQDCLIKTNRNW +CQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
A0A5A7SQI1 Cytochrome c oxidase assembly factor 4-like protein9.2e-2190.74Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        MGKPPISPEN+PPLHRSDA+D+DENVKQLNECSSFYLSLQDCLIKTNRNW +CQ
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
A0A6J1CDM7 uncharacterized protein LOC1110097617.8e-2073.44Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLN
        MGKPP+SPENQPP HRSDA+DDDENV+QLNECSS YLSLQ+CLIKT+RNW ACQ  +  +   N
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLN
A0A6J1L1R2 uncharacterized protein LOC1114990625.0e-1975Show/hide
Query:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLN
        MG PPISPENQPPLH SDA+ DDENVKQLNECSSFYLSLQ+CLIKTNRNW  CQ  +  +   N
Subjt:  MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18920.1 Cox19-like CHCH family protein1.4e-1372.09Show/hide
Query:  PPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ
        PP H+ DA+DDDENVKQL ECSS YLSLQDCL+ +NR+W +CQ
Subjt:  PPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAACCGCCGATCTCGCCGGAGAATCAGCCGCCTCTTCACCGGAGTGACGCTGAAGACGACGACGAGAACGTCAAGCAGCTCAATGAATGCTCATCCTTCTACTT
ATCGTTACAGGATTGTCTTATCAAAACTAACAGGAACTGGAACGCTTGCCAGACTGGTATGCCGCTCATCTCTCCATTGAATCTGAATTGTTTATGGCCATCTGCCAAGA
TCTCTACAAAGAAAGGGTATTTCTTTTTTCTCTATTTACAACATCCATCTACCTTAACATGCCAGCCAGAATTGAAGAGACAAGGTAACAAAATTTTCACTTTCAATCTC
TATCATGAATCTGCAAGCATCCAGCAAGAGAACAATCCATCCATTTTTCCATCATTACCTTTCAGTATGCATTACAAGTCTCTTCTGCTGGTGGAAGAATGTTATAGCAA
CACTGGAGTGTCTGATTATTCAGTGCTGGAACCTCGATTGCTGGGTTCCGATTTGTCACATCAACATGTTGAGAGTTCGGCGGTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATTCGCTAACTTGAGCAGTTCAAAATTATGGTAAGAACTTTGAATTTCATGTAAAATTTGCGTCGAACCTGAACGAAGAAAAATGGGGAAACCGCCGATCTCGCCGGAGA
ATCAGCCGCCTCTTCACCGGAGTGACGCTGAAGACGACGACGAGAACGTCAAGCAGCTCAATGAATGCTCATCCTTCTACTTATCGTTACAGGATTGTCTTATCAAAACT
AACAGGAACTGGAACGCTTGCCAGACTGGTATGCCGCTCATCTCTCCATTGAATCTGAATTGTTTATGGCCATCTGCCAAGATCTCTACAAAGAAAGGGTATTTCTTTTT
TCTCTATTTACAACATCCATCTACCTTAACATGCCAGCCAGAATTGAAGAGACAAGGTAACAAAATTTTCACTTTCAATCTCTATCATGAATCTGCAAGCATCCAGCAAG
AGAACAATCCATCCATTTTTCCATCATTACCTTTCAGTATGCATTACAAGTCTCTTCTGCTGGTGGAAGAATGTTATAGCAACACTGGAGTGTCTGATTATTCAGTGCTG
GAACCTCGATTGCTGGGTTCCGATTTGTCACATCAACATGTTGAGAGTTCGGCGGTTCAGTAG
Protein sequenceShow/hide protein sequence
MGKPPISPENQPPLHRSDAEDDDENVKQLNECSSFYLSLQDCLIKTNRNWNACQTGMPLISPLNLNCLWPSAKISTKKGYFFFLYLQHPSTLTCQPELKRQGNKIFTFNL
YHESASIQQENNPSIFPSLPFSMHYKSLLLVEECYSNTGVSDYSVLEPRLLGSDLSHQHVESSAVQ