CuGenDBv2

Gene ID	Clc06G06200
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Glutaredoxin-dependent peroxiredoxin
Genome location	ClcChr06:6419945..6426963
RNA-Seq Expression	Clc06G06200
Synteny	Clc06G06200
Gene Ontology terms	GO:0034599 - cellular response to oxidative stress (biological process) GO:0042744 - hydrogen peroxide catabolic process (biological process) GO:0045454 - cell redox homeostasis (biological process) GO:0098869 - cellular oxidant detoxification (biological process) GO:0005759 - mitochondrial matrix (cellular component) GO:0008379 - thioredoxin peroxidase activity (molecular function)
InterPro domains	IPR037944 - Peroxiredoxin-5-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7026252.1 Peroxiredoxin-2F, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-73

79.8

Show/hide

Query:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY
        V +DDLLFAELTRRISLLIMDDDELP VH DL+RT+H+++P +LPL VDY+NG +RESKGTGVFIPTRLP  KRK  NV  Y+IKSENKRLN QPSSTYY
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY

Query:  -----------SRLI-MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP
                   +RLI MASAILKRV+ASAMSSLVESMRI ASSRAFAAVAVGTDIVSA+PDVSLQKARSWDEGVSSKFSTTP+KDIFKGKKVVIFGLP
Subjt:  -----------SRLI-MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP

XP_004149266.1 uncharacterized protein LOC101220151 [Cucumis sativus]

3.3e-35

77.14

Show/hide

Query:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNHQPSS
        M VE+DDLLFAELTRRISLLIMDDDELPI H + TRTVHQL+P++LPL +DY+NG +RESKGTGVFIP RLP  KRKQKNVT  Y+IKSENKRLN QPS 
Subjt:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNHQPSS

Query:  TYYSR
        TYY +
Subjt:  TYYSR

XP_022930457.1 uncharacterized protein LOC111436898 [Cucurbita moschata]

4.3e-35

Show/hide

Query:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY
        V +DDLLFAELTRRISLLIMDDDELP VH DL+RT+H+++P QLPL VDY+NG +RESKGTGVFIPTRLP  KRK +NV  Y+IKSENKRLN QPSSTYY
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY

XP_023521928.1 uncharacterized protein LOC111785772 [Cucurbita pepo subsp. pepo]

7.3e-35

Show/hide

Query:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY
        V++DDLLFAELTRRISLLIMDDDE P VH DL+RT+H+++P QLPL VDY+NG +RESKGTGVFIPTRLP  KRK +NV  Y+IKSENKRLN QPSSTYY
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY

XP_038875510.1 uncharacterized protein LOC120067937 [Benincasa hispida]

1.3e-36

78.43

Show/hide

Query:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSST
        MGVENDDLLFAELTRRISLLIMDDDELPIVH D TRTVHQL+P+Q PL +DY+NG IRESKGTGVFIP RLP  KRKQ++V  Y+IK++NK L+HQPSS 
Subjt:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSST

Query:  YY
        YY
Subjt:  YY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGT1 Uncharacterized protein

1.6e-35

77.14

Show/hide

Query:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNHQPSS
        M VE+DDLLFAELTRRISLLIMDDDELPI H + TRTVHQL+P++LPL +DY+NG +RESKGTGVFIP RLP  KRKQKNVT  Y+IKSENKRLN QPS 
Subjt:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNHQPSS

Query:  TYYSR
        TYY +
Subjt:  TYYSR

A0A1S3C8R0 uncharacterized protein LOC103497931

1.0e-34

76.64

Show/hide

Query:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNH--QP
        M VENDDLLFAELTRRISLLIMDDDELPIV+ + TRTVHQL+P++LPLT+DY+NG +RESKGTGVFIPTRLP  KRKQKN T  Y+IKSENKRLN+  QP
Subjt:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNH--QP

Query:  SSTYYSR
        S  YY +
Subjt:  SSTYYSR

A0A5A7SW60 Uncharacterized protein

1.0e-34

76.64

Show/hide

Query:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNH--QP
        M VENDDLLFAELTRRISLLIMDDDELPIV+ + TRTVHQL+P++LPLT+DY+NG +RESKGTGVFIPTRLP  KRKQKN T  Y+IKSENKRLN+  QP
Subjt:  MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVT-DYKIKSENKRLNH--QP

Query:  SSTYYSR
        S  YY +
Subjt:  SSTYYSR

A0A6J1EQJ8 uncharacterized protein LOC111436898

2.1e-35

Show/hide

Query:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY
        V +DDLLFAELTRRISLLIMDDDELP VH DL+RT+H+++P QLPL VDY+NG +RESKGTGVFIPTRLP  KRK +NV  Y+IKSENKRLN QPSSTYY
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY

A0A6J1KEC6 uncharacterized protein LOC111494227

1.3e-34

Show/hide

Query:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY
        V++DDLLFAELTRRISLLIMDDDELP VH DL+RT+H+++P QLPL VDYKNG +RESKGTGVFIPTRLP  KRK +NV  Y+IKS N RLN QPSSTYY
Subjt:  VENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYY

SwissProt top hits

e value

%identity

Alignment

Q9M7T0 Peroxiredoxin-2F, mitochondrial

6.6e-23

73.17

Show/hide

Query:  MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP
        MA +ILK  + SA+ S   S RIG SSR F+ +A GTDI SAAP VSLQKARSWDEGVSSKFSTTP+ DIFKGKKVVIFGLP
Subjt:  MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP

Q9SDD6 Peroxiredoxin-2F, mitochondrial

9.3e-17

59.76

Show/hide

Query:  MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP
        MASA+L++ +    ++   +     +SR  A+V  G+DIVSAAP VSLQKARSWDEGV++ FSTTP+KDIF GKKVVIFGLP
Subjt:  MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP

Arabidopsis top hits

e value

%identity

Alignment

AT3G06050.1 peroxiredoxin IIF

4.7e-24

73.17

Show/hide

Query:  MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP
        MA +ILK  + SA+ S   S RIG SSR F+ +A GTDI SAAP VSLQKARSWDEGVSSKFSTTP+ DIFKGKKVVIFGLP
Subjt:  MASAILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGGGAGTAGAAAATGATGATTTGTTGTTTGCGGAACTTACTCGAAGGATTTCACTTCTTATTATGGACGACGATGAGCTTCCGATCGTTCATATGGATTTAACTAGAAC
AGTACACCAACTTCAACCTAAGCAATTACCATTAACGGTGGATTACAAGAACGGTTTAATAAGGGAAAGCAAAGGCACTGGAGTTTTCATTCCAACGCGATTACCACGGT
CTAAGAGGAAGCAAAAGAATGTCACCGACTATAAAATCAAATCAGAAAACAAGAGGCTCAATCACCAACCATCTTCAACATATTATTCTAGGCTTATCATGGCGTCCGCG
ATTCTGAAGCGAGTCAGCGCCTCCGCAATGAGCTCGCTGGTTGAATCTATGCGAATCGGAGCTTCATCGCGAGCTTTTGCGGCGGTGGCGGTCGGAACTGACATCGTCTC
CGCTGCACCGGACGTTTCTCTCCAGAAGGCTCGGAGTTGGGACGAAGGTGTCTCCTCCAAGTTCTCCACGACTCCGGTCAAAGACATTTTCAAGGGCAAGAAGGTCGTCA
TCTTTGGGCTTCCTGTAAGTCAATCTATTCGGTCTTTTACAGTTGTATATATATGCTATGGAAATCATGAATTCTGTACCAAATAATAGTTGCCGGCGTATATGTCTTCA
TCCCTTTTTCAACGTGGTGTGCTCTTTGATGAGGACAATAACTTTCATGATCAATGCCTTCATCCATCCATCAGTGAAATGAGGATTTATTTTAGGGATCAATATTAGAT
AATATGGAGTTCTATCTCAAAACCAATTGACAATGAGAGAAGTAACCATATAACTTATACCATTACGAGGTCTCTTGATTTTTTCAATATGGGATCTATGACATGTCTTC
TCAAGATGGTGCCTCTTTGGTTCACCATTCTTGGATGAGATTTTTTTTTTTTCTTTTTTTTTTCCCGAAATGTCCATTTGAATTTGATGAGATTTGATACCATATTAGAT
AGCATAAGTTTCCATCTCAAAACTAATGGGCAATGAGAAGAGTAGCACATGTAGCTTATAATCATTATGAGGTTTCTTGATTTTTTCAATGTGAAATCCTCAACAATAAT
GGTGTTTTGTGGTTTAGACACTGAGGCAGAAGAATTGTTAAATTTTGTACCATGAAATTAAACTAGAGAATCCATGAACATTATTTGAATTATCGACATTAAGCGATTGT
GATAGTACATATTTTCCCCCTTTACTTTTTCTCCCTTGACAAACGCATTTGGTGGTATGGAGATCTGAATCCTGGTGGGATCTTTATTCTATACTAGATTTTAGCGGTTG
GAGTGATCCCTGGGACTTAGCTTATTTATTTCCTTGGTTAGGATTGGAACTTAGGAGGAGAAAACCTCTTCCTTCTATCTGGATAATTGGAAAAAGTGAAAACAAGCTTT
CGATAATTAACAACATGTAGCATTGTTGAAGTAAAATGTTAACAGTTTTTGTTCTGTTTAAGCGAGTAATTATGTCATTTTGTTGGAACTTGTAAGTATCACACACACAC
ACACACACACACACACACACATTCAATCTTTGATGAACACCGTGTGGATATAACTGCTCTTTCTCTGGGTTTTTCACTGTTAAGTAAGTTAACTATATGATGCACATTTT
ATTGCAATTCCCAGGGTGCATATACAGGAGTTTGTTCCCAGCAGCACGTTCCTAGTTACAAGAATAAAATTGATGACTTCAAGGCTAAAGGAATTGATTCTGTTATTTGT
GTGTCTGTTAATGATCCATATACTCTCAATGGCTGGGCTGAGAAACTTGAAGCGAAAGATGCTGTAAGCTTCCTTGACTAGAGTTACAACAAAACTGCATAATTTTCTTT
ACTTGGTGTGTAATTTAGTTATTGTAAGTAGGAACTGTTTTCTTTGCTAATTATAATGGCCTATTTTGATTTTCGTAAATTTGTCCTGTAATTATCCTCTTTATTCCTAT
ACAGATACAATTTTTTGGGGACTTCGATGGGAGATTTCACAAGAGCCTGGAACTGGATAAAGATCTTTCTGCTGCTTTGCTGGGCCCCCGTTCTCAAAGATGGTCAGCAT
ATGTTGTAGATGGAAAAGTTAAGGCTCTTAACATAGAGGAAGCTCCATCTGACTTTAAGGTTACTGGGGCAGAGGTCATTTTGAAGCAAATTTAGAGTCAGTTTCCATAG
CCAACCAACAAAAGCTCTTGGGTTCCGAATAAGATCATGTGTGTAAATGAGTAGTTATGTATTCCAGAGATTTTCCTTTGGTTGTTTCTCTGAAGTAAATCCCAAGTGAC
AATTGCTTGGATGCTTTGCTTTCACTTATTGTTCTTCATATATAAAATGCTCCAACTTGGATTCAGAAACTCGTGAATATGGAAACGAGAATTCTTCAGTACAAACCAGC
CTTTTTGATTGGAATGCGAATCCTAAACCCTAAACTCTGACCATGAACGGGAATAAACAATAAGAATCAAGAGAAACCTTGGCCAAATCATGCAAATTTAGGTCTAGATC
TTCTCCAGTTAAGGTGATCTTCTCCAGTTGAGGGTGTGGAGTAAGTTTTAGATTTGAACTGGATTGGTCTTGATTTGATCATCTAATTCTATTATTACATAAATGATCAA
GTGAAATGTCAGAATCAAGTTGATTTAATTTCCTCATACAATTCTTATGGTTGGTAAATCAGTGTGAAAATGGATATCAGAGGAAACCTTTACCATATATATATGTGTGT
GTGTGTGTGTGTGTGTGTGTGTATCTTTTCTTTTACTTTTTGGGGATTCTATTCTAAGATTTCGCCCCCATTTTCCATCTCACTATGTTTCTTTAGTGTGTGTGTATATA
TATTGAAGATTATGATGTAATATTGAAATTTAAACTCTTAGAAATTACCATTTAAAGAGTTCATTTTATCTGGTTAAGATTAAATTTTGGAATAAAAAATAGAGTAGTTC
TGTGCAAGGAACTCAATCTCTATGAATTCTTTGGTTTTTTCCACAAAAATAAATGAAACCTTTTGTAAAGACAGGGATTTAAA

Protein sequence

Show/hide protein sequence

MGVENDDLLFAELTRRISLLIMDDDELPIVHMDLTRTVHQLQPKQLPLTVDYKNGLIRESKGTGVFIPTRLPRSKRKQKNVTDYKIKSENKRLNHQPSSTYYSRLIMASA
ILKRVSASAMSSLVESMRIGASSRAFAAVAVGTDIVSAAPDVSLQKARSWDEGVSSKFSTTPVKDIFKGKKVVIFGLPVSQSIRSFTVVYICYGNHEFCTK

Clc06G06200 (gene) of Watermelon (cordophanus) v2 genome