; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G06210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G06210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionE3 ubiquitin-protein ligase RHF1A
Genome locationClcChr06:6428572..6431649
RNA-Seq ExpressionClc06G06210
SyntenyClc06G06210
Gene Ontology termsGO:0009561 - megagametogenesis (biological process)
GO:0010498 - proteasomal protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0051726 - regulation of cell cycle (biological process)
GO:0055046 - microgametogenesis (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149264.1 E3 ubiquitin-protein ligase RHF1A [Cucumis sativus]3.5e-16588.15Show/hide
Query:  MADFTSSS---SQNPNAVSAS-AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSR
        MA+FTSSS   S NPNAVSAS AASDD FDD CCICLDPFTSDDPATITSCKHEYHLQCILDWSQRS+ECPICCQLLVLKDPVGQELLAAMASERLLKSR
Subjt:  MADFTSSS---SQNPNAVSAS-AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSR

Query:  SLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSV
         LSSAASTSL FHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFG+GPS+V+S CP E+PMSPRFQDAT TSPNSDSPSP SP+ SV
Subjt:  SLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSV

Query:  GRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS
        GRTGI+K+SP VILLP   SG QQKTNQSEG SF DSIKSKWSATSAKY+ESILRSTQGIKEKLLARNSSVKELS+GVKREVSAGIAGVARMIDRLD+TS
Subjt:  GRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS

Query:  KRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        KRN  S+SFFSCSGGTSNSLKGKNVVQESAVTDGSVKI+RI TGSPSQVSPTVP SV+ SLAQ
Subjt:  KRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

XP_008458566.1 PREDICTED: E3 ubiquitin-protein ligase RHF1A [Cucumis melo]5.7e-16386.72Show/hide
Query:  MADFTSSSSQ-------NPNAVSAS---AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASE
        MA+FTSSSS        NPNAVSAS   AASDD FDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRS+ECPICCQLL LKDPVGQELLAAMASE
Subjt:  MADFTSSSSQ-------NPNAVSAS---AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASE

Query:  RLLKSRSLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPG
        RLLKSRSLSSAASTSLRFHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFG+GPS+V S CP E+PMSPRFQDAT TSPNSDSPSPG
Subjt:  RLLKSRSLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPG

Query:  SPLSSVGRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMID
        SP+ SVG+TGI+K+SP VILLP   SG QQKTNQSEG SF DSIKSKWSATSAKY+ESILRSTQGIKEKLLARNSSVKELS+GVKREVSAGIAGVARMID
Subjt:  SPLSSVGRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMID

Query:  RLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        RLD+TSKRN  S+SFFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPSQVSPTVP SVE SLAQ
Subjt:  RLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

XP_023006440.1 E3 ubiquitin-protein ligase RHF1A isoform X1 [Cucurbita maxima]1.5e-15583.84Show/hide
Query:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS
        MADFTSSS       + S  SDDAF DDACCICLDPFTS DP +ITSCKHEYHLQCILDWSQRSNECPICCQLLVL+DPVGQELLAA+ASE+LLKSRSLS
Subjt:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS

Query:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS
        S ASTSLRFHENFD+DHDS+HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFGLGPS+  S CPEE+     P+SPRFQDAT +SPNSDSPSPGSPLS
Subjt:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS

Query:  SVGRTGISKVSPRVILL-PLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT
        S GRTGISK+SPRV+L   LSG QQKTNQ EG SFPDSIKSKWSATSAKY+ESI RSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLD++
Subjt:  SVGRTGISKVSPRVILL-PLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT

Query:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        SKRNA S+SFFSCSGGTSNS+KGKNVV QES VTDGSVK DRI TGSPS VSPTVP SV  SLAQ
Subjt:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

XP_023549293.1 E3 ubiquitin-protein ligase RHF1A isoform X1 [Cucurbita pepo subsp. pepo]9.7e-15583.29Show/hide
Query:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS
        MADFTSSS       + S+ SDDAF DDACCICLDPFTS DP +ITSCKHEYHLQCILDWSQRSNECPICCQLLVL+DPVGQELLAA+ASE+LLKSRSLS
Subjt:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS

Query:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS
        S ASTSLRFHENFD+DHDS+HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFGLGPS+  S CPEE+     P+SPRFQDAT +SPNSDSPSPGSPLS
Subjt:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS

Query:  SVGRTGISKVSPRVILLPL-SGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT
        S GRTGISKV+PRV+L    SG QQKTNQSEG SFPDSIKSKWSATSAKY+ESI RSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLD++
Subjt:  SVGRTGISKVSPRVILLPL-SGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT

Query:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        SKRNA S+SFFSCSGGTSNS+KGKNVV QES VTDGS K DRI TGSPS VSPTVP +V+ SLAQ
Subjt:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

XP_038906575.1 E3 ubiquitin-protein ligase RHF1A [Benincasa hispida]1.1e-17191.34Show/hide
Query:  MADFT-SSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS
        MA+FT SSSS NPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAA+ASERLLK RSLS
Subjt:  MADFT-SSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS

Query:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSVGRT
        SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYV RRERQRHFGLGPS+V S CPEE+PMSPRFQDAT  SPNSDSPSPGSPLSSVG+T
Subjt:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSVGRT

Query:  GISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTSKRNAT
        G SK+S  VILLP SG  QKTNQSEG SFPDSIKSKWSATSAKY+ESILRSTQGIKEKLLARNSS+KELSRGVKREVSAGIAGVARMIDRLD+TSKRN  
Subjt:  GISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTSKRNAT

Query:  SISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        S+SFFS SGGTSNSLKGKNVVQESAVTDGSVKIDRI TGSPSQVSPTVP SVE SLAQ
Subjt:  SISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ6 RING-type domain-containing protein1.7e-16588.15Show/hide
Query:  MADFTSSS---SQNPNAVSAS-AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSR
        MA+FTSSS   S NPNAVSAS AASDD FDD CCICLDPFTSDDPATITSCKHEYHLQCILDWSQRS+ECPICCQLLVLKDPVGQELLAAMASERLLKSR
Subjt:  MADFTSSS---SQNPNAVSAS-AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSR

Query:  SLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSV
         LSSAASTSL FHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFG+GPS+V+S CP E+PMSPRFQDAT TSPNSDSPSP SP+ SV
Subjt:  SLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSV

Query:  GRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS
        GRTGI+K+SP VILLP   SG QQKTNQSEG SF DSIKSKWSATSAKY+ESILRSTQGIKEKLLARNSSVKELS+GVKREVSAGIAGVARMIDRLD+TS
Subjt:  GRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS

Query:  KRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        KRN  S+SFFSCSGGTSNSLKGKNVVQESAVTDGSVKI+RI TGSPSQVSPTVP SV+ SLAQ
Subjt:  KRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

A0A1S3C9D8 E3 ubiquitin-protein ligase RHF1A2.7e-16386.72Show/hide
Query:  MADFTSSSSQ-------NPNAVSAS---AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASE
        MA+FTSSSS        NPNAVSAS   AASDD FDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRS+ECPICCQLL LKDPVGQELLAAMASE
Subjt:  MADFTSSSSQ-------NPNAVSAS---AASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASE

Query:  RLLKSRSLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPG
        RLLKSRSLSSAASTSLRFHENFD DHDS HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFG+GPS+V S CP E+PMSPRFQDAT TSPNSDSPSPG
Subjt:  RLLKSRSLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPG

Query:  SPLSSVGRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMID
        SP+ SVG+TGI+K+SP VILLP   SG QQKTNQSEG SF DSIKSKWSATSAKY+ESILRSTQGIKEKLLARNSSVKELS+GVKREVSAGIAGVARMID
Subjt:  SPLSSVGRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMID

Query:  RLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        RLD+TSKRN  S+SFFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPSQVSPTVP SVE SLAQ
Subjt:  RLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

A0A5A7SVT0 E3 ubiquitin-protein ligase RHF1A1.3e-14488.61Show/hide
Query:  ITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARY
        ITSCKHEYHLQCILDWSQRS+ECPICCQLL LKDPVGQELLAAMASERLLKSRSLSSAASTSLRFHENFD DHDS HSDDSDFDDLIMQHLAAAASRARY
Subjt:  ITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARY

Query:  VQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSVGRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSA
        V RRERQRHFG+GPS+V S CP E+PMSPRFQDAT TSPNSDSPSPGSP+ SVG+TGI+K+SP VILLP   SG QQKTNQSEG SF DSIKSKWSATSA
Subjt:  VQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSVGRTGISKVSPRVILLP--LSGCQQKTNQSEGFSFPDSIKSKWSATSA

Query:  KYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
        KY+ESILRSTQGIKEKLLARNSSVKELS+GVKREVSAGIAGVARMIDRLD+TSKRN  S+SFFSC GGTSNSLKGKNVVQESA TDGSVKI+RI TGSPS
Subjt:  KYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

Query:  QVSPTVPRSVEASLAQ
        QVSPTVP SVE SLAQ
Subjt:  QVSPTVPRSVEASLAQ

A0A6J1H5S5 E3 ubiquitin-protein ligase RHF1A isoform X12.0e-15382.74Show/hide
Query:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS
        MADFTSSS       + S  SDDAF DDACCICLDPFTS DP +ITSCKHEYHLQCILDWSQRSNECPICCQLLVL+DPVGQELLAA+A+E+LLKSRSLS
Subjt:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS

Query:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS
        S ASTSLRFHENFD+DHDS+ SDDSDFDDLIMQHLAAAASRARYV RRERQR FGLGPS+  S CPEE+     P+SPRFQDA+ +SPNSDSPSPGSPLS
Subjt:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS

Query:  SVGRTGISKVSPRVILLPL-SGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT
        S GRTGISK+SPRV+L    SG QQKTNQSEG SFPDSIKSKWSATSAKY+ESI RSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLD++
Subjt:  SVGRTGISKVSPRVILLPL-SGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT

Query:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        SKRNA S+SFFSCSGGTSNS+KGKNVV QES VTDGSVK DRI TGSPS VSPTVP SV+ SLAQ
Subjt:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

A0A6J1L048 E3 ubiquitin-protein ligase RHF1A isoform X17.2e-15683.84Show/hide
Query:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS
        MADFTSSS       + S  SDDAF DDACCICLDPFTS DP +ITSCKHEYHLQCILDWSQRSNECPICCQLLVL+DPVGQELLAA+ASE+LLKSRSLS
Subjt:  MADFTSSSSQNPNAVSASAASDDAF-DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLS

Query:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS
        S ASTSLRFHENFD+DHDS+HSDDSDFDDLIMQHLAAAASRARYV RRERQRHFGLGPS+  S CPEE+     P+SPRFQDAT +SPNSDSPSPGSPLS
Subjt:  SAASTSLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEI-----PMSPRFQDATPTSPNSDSPSPGSPLS

Query:  SVGRTGISKVSPRVILL-PLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT
        S GRTGISK+SPRV+L   LSG QQKTNQ EG SFPDSIKSKWSATSAKY+ESI RSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLD++
Subjt:  SVGRTGISKVSPRVILL-PLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMT

Query:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ
        SKRNA S+SFFSCSGGTSNS+KGKNVV QES VTDGSVK DRI TGSPS VSPTVP SV  SLAQ
Subjt:  SKRNATSISFFSCSGGTSNSLKGKNVV-QESAVTDGSVKIDRISTGSPSQVSPTVPRSVEASLAQ

SwissProt top hitse value%identityAlignment
Q2HIJ8 Probable E3 ubiquitin-protein ligase RHB1A3.7e-0841.82Show/hide
Query:  DAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKD
        D  +D C IC + +  ++P   T C+HE+HL C+L+W +RS+ CPIC + +V  D
Subjt:  DAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKD

Q4TU14 E3 ubiquitin-protein ligase RHF1A3.2e-6045.61Show/hide
Query:  SSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSL
        SSS + +A+  ++  D+  DDAC ICL+PFT  DP+T+TSCKHEYHLQCI++WSQRS ECPIC QL VL+DP  QELLAA+  ERLLK+R++SS++  S+
Subjt:  SSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSL

Query:  RFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGL-GPSEVTSGCPEEIPMSPRF--------QDATP-TSPNSDSPSPGSPLSSV
          H + D   +   S  S FD+  ++HL  AA R   ++RR+ Q    L   S+ T+  P ++    R         Q++ P  SP S +PSP S  SS+
Subjt:  RFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGL-GPSEVTSGCPEEIPMSPRF--------QDATP-TSPNSDSPSPGSPLSSV

Query:  --GRTGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS
               S++SP       S   Q     E  S P++IKSK +A SAKY+ESI +S QG+KEKLLARN+SVKELS+GV+RE++AGIAGVARMI+R+D +S
Subjt:  --GRTGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS

Query:  KR---NATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKID
        KR   +A   +  + + G + S KGK V   S   +   K +
Subjt:  KR---NATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKID

Q8LE94 E3 ubiquitin-protein ligase At3g022903.7e-0841.67Show/hide
Query:  DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLL
        +D C  CL+ +TS++P  +T C H +HL CI +W +RS  CP+C +++
Subjt:  DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLL

Q93ZF6 E3 ubiquitin-protein ligase AIRP13.7e-0847.06Show/hide
Query:  DACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKD
        D C ICL+ +  D+P  +T C H++HL CIL W +RS  CP+C + LVL +
Subjt:  DACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKD

Q9ZT42 E3 ubiquitin-protein ligase RHF2A1.8e-3935.69Show/hide
Query:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST
        TS       A        DA DDAC ICL+ F   DP+T+TSCKHEYHLQCIL+W QRS++CP+C Q + LKDP  QELL A+  ER  +     +A   
Subjt:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST

Query:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------
              +F++ H     D+++ ++ I+QHLAAAA+  RAR+  RRE  R          F +  S+  +  P     +P SP  +D + T  N       
Subjt:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------

Query:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA
          S   +   P SS  R      S  + R +       Q +   SE  SF +S+KS+ +A S +Y+ESI ++T+  K++L +RN+S+ +L   VKREVSA
Subjt:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA

Query:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
        GIA V+RM++RL+       ++ S    S      T+N         E +V +  VK +  +TGS S
Subjt:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

Arabidopsis top hitse value%identityAlignment
AT3G02290.1 RING/U-box superfamily protein2.6e-0941.67Show/hide
Query:  DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLL
        +D C  CL+ +TS++P  +T C H +HL CI +W +RS  CP+C +++
Subjt:  DDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLL

AT4G14220.1 RING-H2 group F1A2.3e-6145.61Show/hide
Query:  SSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSL
        SSS + +A+  ++  D+  DDAC ICL+PFT  DP+T+TSCKHEYHLQCI++WSQRS ECPIC QL VL+DP  QELLAA+  ERLLK+R++SS++  S+
Subjt:  SSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSL

Query:  RFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGL-GPSEVTSGCPEEIPMSPRF--------QDATP-TSPNSDSPSPGSPLSSV
          H + D   +   S  S FD+  ++HL  AA R   ++RR+ Q    L   S+ T+  P ++    R         Q++ P  SP S +PSP S  SS+
Subjt:  RFHENFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGL-GPSEVTSGCPEEIPMSPRF--------QDATP-TSPNSDSPSPGSPLSSV

Query:  --GRTGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS
               S++SP       S   Q     E  S P++IKSK +A SAKY+ESI +S QG+KEKLLARN+SVKELS+GV+RE++AGIAGVARMI+R+D +S
Subjt:  --GRTGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTS

Query:  KR---NATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKID
        KR   +A   +  + + G + S KGK V   S   +   K +
Subjt:  KR---NATSISFFSCSGGTSNSLKGKNVVQESAVTDGSVKID

AT5G22000.1 RING-H2 group F2A1.3e-4035.69Show/hide
Query:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST
        TS       A        DA DDAC ICL+ F   DP+T+TSCKHEYHLQCIL+W QRS++CP+C Q + LKDP  QELL A+  ER  +     +A   
Subjt:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST

Query:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------
              +F++ H     D+++ ++ I+QHLAAAA+  RAR+  RRE  R          F +  S+  +  P     +P SP  +D + T  N       
Subjt:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------

Query:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA
          S   +   P SS  R      S  + R +       Q +   SE  SF +S+KS+ +A S +Y+ESI ++T+  K++L +RN+S+ +L   VKREVSA
Subjt:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA

Query:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
        GIA V+RM++RL+       ++ S    S      T+N         E +V +  VK +  +TGS S
Subjt:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

AT5G22000.2 RING-H2 group F2A1.3e-4035.69Show/hide
Query:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST
        TS       A        DA DDAC ICL+ F   DP+T+TSCKHEYHLQCIL+W QRS++CP+C Q + LKDP  QELL A+  ER  +     +A   
Subjt:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST

Query:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------
              +F++ H     D+++ ++ I+QHLAAAA+  RAR+  RRE  R          F +  S+  +  P     +P SP  +D + T  N       
Subjt:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------

Query:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA
          S   +   P SS  R      S  + R +       Q +   SE  SF +S+KS+ +A S +Y+ESI ++T+  K++L +RN+S+ +L   VKREVSA
Subjt:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA

Query:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
        GIA V+RM++RL+       ++ S    S      T+N         E +V +  VK +  +TGS S
Subjt:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS

AT5G22000.3 RING-H2 group F2A1.3e-4035.69Show/hide
Query:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST
        TS       A        DA DDAC ICL+ F   DP+T+TSCKHEYHLQCIL+W QRS++CP+C Q + LKDP  QELL A+  ER  +     +A   
Subjt:  TSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAAST

Query:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------
              +F++ H     D+++ ++ I+QHLAAAA+  RAR+  RRE  R          F +  S+  +  P     +P SP  +D + T  N       
Subjt:  SLRFHENFDIDHDSAHSDDSDFDDLIMQHLAAAAS--RARYVQRRERQR---------HFGLGPSEVTSGCP---EEIPMSPRFQDATPTSPN-------

Query:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA
          S   +   P SS  R      S  + R +       Q +   SE  SF +S+KS+ +A S +Y+ESI ++T+  K++L +RN+S+ +L   VKREVSA
Subjt:  --SDSPSPGSPLSSVGR---TGISKVSPRVILLPLSGCQQKTNQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSA

Query:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS
        GIA V+RM++RL+       ++ S    S      T+N         E +V +  VK +  +TGS S
Subjt:  GIAGVARMIDRLDMTSKRNATSISFFSCSGG----TSNSLKGKNVVQESAVTDGSVKIDRISTGSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTTCACTTCTTCTTCCTCTCAGAATCCCAATGCTGTTTCAGCTTCCGCTGCTTCCGATGATGCTTTTGATGACGCTTGCTGTATTTGCCTCGACCCATTTAC
CTCCGATGATCCCGCCACTATTACCAGTTGCAAGCATGAATATCATCTCCAATGTATTCTTGATTGGTCTCAAAGAAGCAATGAATGCCCAATCTGTTGCCAGTTGCTAG
TGTTGAAGGACCCTGTTGGCCAGGAGCTTCTAGCAGCCATGGCTAGTGAAAGGCTTTTAAAGTCGAGAAGCTTGTCTTCTGCTGCATCCACTTCTTTGCGTTTCCACGAA
AACTTTGATATTGATCACGACTCCGCTCACTCGGATGACTCTGACTTTGATGACCTGATTATGCAGCATCTTGCTGCTGCAGCTAGCAGAGCACGGTATGTTCAAAGAAG
GGAGAGGCAAAGACATTTTGGACTTGGGCCTTCAGAAGTTACCTCTGGATGTCCAGAAGAGATTCCTATGTCACCACGATTTCAAGATGCAACTCCAACTTCACCTAATA
GTGATTCACCATCTCCTGGTTCCCCGTTGTCATCTGTTGGCCGCACCGGAATTAGTAAAGTCTCGCCTAGGGTTATACTGTTGCCACTGTCTGGTTGTCAACAAAAAACA
AACCAATCTGAGGGGTTCTCTTTCCCAGATTCCATCAAATCCAAATGGTCTGCTACTTCTGCGAAGTACAGGGAGTCAATCTTGCGAAGCACTCAAGGTATTAAGGAGAA
ACTACTTGCTCGTAACAGCTCAGTGAAGGAGCTAAGCAGAGGAGTAAAGCGTGAAGTGAGTGCTGGGATTGCTGGCGTTGCTCGAATGATTGATCGCCTAGATATGACTT
CAAAAAGGAATGCTACTTCTATTTCCTTCTTCAGCTGCAGTGGGGGTACATCAAACTCCTTGAAAGGAAAGAACGTTGTGCAAGAGAGTGCTGTCACTGATGGTTCAGTT
AAAATTGATAGAATATCTACTGGTTCACCTTCACAGGTTTCCCCTACTGTTCCACGCTCCGTCGAAGCTTCTTTAGCTCAGGTACTTCACTTTATGTCATTGGACATATT
CAACACAAACCAGCATCAAGCTAATACCTGTTTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCATAACTCTCATCTTTGACCATTCTCTCTCAGTCTCTCTCTCTCTCTCTCTCTCTCTCTACCCATTTCTAGGTTTCGGTTTTCCCCCAATTCCCTCTTCTAAAATCCT
TCCTTCTCCCCTTTGATTTTGTCTGCACTCCATGGCCGATTTCACTTCTTCTTCCTCTCAGAATCCCAATGCTGTTTCAGCTTCCGCTGCTTCCGATGATGCTTTTGATG
ACGCTTGCTGTATTTGCCTCGACCCATTTACCTCCGATGATCCCGCCACTATTACCAGTTGCAAGCATGAATATCATCTCCAATGTATTCTTGATTGGTCTCAAAGAAGC
AATGAATGCCCAATCTGTTGCCAGTTGCTAGTGTTGAAGGACCCTGTTGGCCAGGAGCTTCTAGCAGCCATGGCTAGTGAAAGGCTTTTAAAGTCGAGAAGCTTGTCTTC
TGCTGCATCCACTTCTTTGCGTTTCCACGAAAACTTTGATATTGATCACGACTCCGCTCACTCGGATGACTCTGACTTTGATGACCTGATTATGCAGCATCTTGCTGCTG
CAGCTAGCAGAGCACGGTATGTTCAAAGAAGGGAGAGGCAAAGACATTTTGGACTTGGGCCTTCAGAAGTTACCTCTGGATGTCCAGAAGAGATTCCTATGTCACCACGA
TTTCAAGATGCAACTCCAACTTCACCTAATAGTGATTCACCATCTCCTGGTTCCCCGTTGTCATCTGTTGGCCGCACCGGAATTAGTAAAGTCTCGCCTAGGGTTATACT
GTTGCCACTGTCTGGTTGTCAACAAAAAACAAACCAATCTGAGGGGTTCTCTTTCCCAGATTCCATCAAATCCAAATGGTCTGCTACTTCTGCGAAGTACAGGGAGTCAA
TCTTGCGAAGCACTCAAGGTATTAAGGAGAAACTACTTGCTCGTAACAGCTCAGTGAAGGAGCTAAGCAGAGGAGTAAAGCGTGAAGTGAGTGCTGGGATTGCTGGCGTT
GCTCGAATGATTGATCGCCTAGATATGACTTCAAAAAGGAATGCTACTTCTATTTCCTTCTTCAGCTGCAGTGGGGGTACATCAAACTCCTTGAAAGGAAAGAACGTTGT
GCAAGAGAGTGCTGTCACTGATGGTTCAGTTAAAATTGATAGAATATCTACTGGTTCACCTTCACAGGTTTCCCCTACTGTTCCACGCTCCGTCGAAGCTTCTTTAGCTC
AGGTACTTCACTTTATGTCATTGGACATATTCAACACAAACCAGCATCAAGCTAATACCTGTTTTGCTTAA
Protein sequenceShow/hide protein sequence
MADFTSSSSQNPNAVSASAASDDAFDDACCICLDPFTSDDPATITSCKHEYHLQCILDWSQRSNECPICCQLLVLKDPVGQELLAAMASERLLKSRSLSSAASTSLRFHE
NFDIDHDSAHSDDSDFDDLIMQHLAAAASRARYVQRRERQRHFGLGPSEVTSGCPEEIPMSPRFQDATPTSPNSDSPSPGSPLSSVGRTGISKVSPRVILLPLSGCQQKT
NQSEGFSFPDSIKSKWSATSAKYRESILRSTQGIKEKLLARNSSVKELSRGVKREVSAGIAGVARMIDRLDMTSKRNATSISFFSCSGGTSNSLKGKNVVQESAVTDGSV
KIDRISTGSPSQVSPTVPRSVEASLAQVLHFMSLDIFNTNQHQANTCFA