; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G06227 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G06227
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAldose 1-epimerase
Genome locationClcChr06:6448159..6448597
RNA-Seq ExpressionClc06G06227
SyntenyClc06G06227
Gene Ontology termsGO:0006006 - glucose metabolic process (biological process)
GO:0033499 - galactose catabolic process via UDP-galactose (biological process)
GO:0004034 - aldose 1-epimerase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR011013 - Galactose mutarotase-like domain superfamily
IPR014718 - Glycoside hydrolase-type carbohydrate-binding


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802955.1 Aldose 1-epimerase [Senna tora]5.6e-0948.61Show/hide
Query:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        E++T+   + +    ++   +G   F+Y+ H  LCL+TQ F + VNHPNF   IVT ENPYEH MLFKFSTK
Subjt:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
KAG6575006.1 Aldose 1-epimerase, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1155.71Show/hide
Query:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFS
        E+WT+ E + +     +++  G   FVYE H  LCL+TQ F N VN PNF  HIVTKE PYEHSMLFKFS
Subjt:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFS
KAG7013577.1 Aldose 1-epimerase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1155.71Show/hide
Query:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFS
        E+WT+ E + +     +++  G   FVYE H  LCL+TQ F N VN PNF  HIVTKE PYEHSMLFKFS
Subjt:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFS
KGN46963.1 hypothetical protein Csa_020978 [Cucumis sativus]5.4e-1252.78Show/hide
Query:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        E+WT+ + + +     + +  G   FVYE H  LC++TQ F + VNHPNF  HIVTKE+PYEHSMLFKFST+
Subjt:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
XP_038875522.1 galactose mutarotase-like [Benincasa hispida]9.2e-1254.93Show/hide
Query:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFST
        E+WT+ E + +     + +  G   FVY+ H  LCL+TQ F + VNHPNF   IVTKENPYEHSMLFKFST
Subjt:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFST
TrEMBL top hitse value%identityAlignment
A0A0A0KBU6 Aldose 1-epimerase2.6e-1252.78Show/hide
Query:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        E+WT+ + + +     + +  G   FVYE H  LC++TQ F + VNHPNF  HIVTKE+PYEHSMLFKFST+
Subjt:  EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
A0A2Z6N9T1 Aldose 1-epimerase1.8e-0838.78Show/hide
Query:  HVKTWERDRKVKSCYFTRE-------EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        +V   E+ +K+K      +       E++T+   + +     I   +G + +VY+ H  LCL++Q F + VNHPNF   IVTKE PY+H MLFKFSTK
Subjt:  HVKTWERDRKVKSCYFTRE-------EVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
A0A314YNF9 Aldose 1-epimerase2.3e-0865.96Show/hide
Query:  FVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        FVYE H  LCL+TQ F + VNHPNF   IVT + PY+H+MLFKFSTK
Subjt:  FVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
A0A4Y1R861 Aldose 1-epimerase2.3e-0865.96Show/hide
Query:  FVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        FVYE H  LCL+TQ F + VNHPNF   IVT + PY+H+MLFKFSTK
Subjt:  FVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
A0A6P5SPZ8 Aldose 1-epimerase2.3e-0865.96Show/hide
Query:  FVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
        FVYE H  LCL+TQ F + VNHPNF   IVT + PY+H+MLFKFSTK
Subjt:  FVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G15140.1 Galactose mutarotase-like superfamily protein1.8e-0547.73Show/hide
Query:  VYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFS
        VY+    LCL+TQ + + +NHP F   IV     Y+H+MLFKFS
Subjt:  VYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGACAATCTTCACCTTCCATCCTCATGTCAAAACATGGGAAAGGGACAGAAAAGTAAAAAGCTGCTACTTTACGAGAGAGGAAGTCTGGACGAGTATTGAAAT
TATGGACTATTGTCGAAGGATTACAATTTTACACAAGCAAGGGTTCACACATTTTGTCTATGAAACTCATGTGGAACTTTGTTTGAAGACTCAAAGATTTCTTAATGTGG
TGAACCATCCAAATTTTGCTTTACATATTGTTACGAAAGAAAACCCTTATGAACACTCAATGTTGTTTAAGTTTTCAACCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGACAATCTTCACCTTCCATCCTCATGTCAAAACATGGGAAAGGGACAGAAAAGTAAAAAGCTGCTACTTTACGAGAGAGGAAGTCTGGACGAGTATTGAAAT
TATGGACTATTGTCGAAGGATTACAATTTTACACAAGCAAGGGTTCACACATTTTGTCTATGAAACTCATGTGGAACTTTGTTTGAAGACTCAAAGATTTCTTAATGTGG
TGAACCATCCAAATTTTGCTTTACATATTGTTACGAAAGAAAACCCTTATGAACACTCAATGTTGTTTAAGTTTTCAACCAAATAA
Protein sequenceShow/hide protein sequence
MEKTIFTFHPHVKTWERDRKVKSCYFTREEVWTSIEIMDYCRRITILHKQGFTHFVYETHVELCLKTQRFLNVVNHPNFALHIVTKENPYEHSMLFKFSTK