; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc06G06560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G06560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeat shock 22 kDa protein
Genome locationClcChr06:6869063..6870202
RNA-Seq ExpressionClc06G06560
SyntenyClc06G06560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040800.1 heat shock 22 kDa protein [Cucumis melo var. makuwa]8.0e-8594.08Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PV NRQNITVQY SNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VENSNCFRFVAETDG+SEEFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLPELATA FDGGKLIVTVPKRED GEGAWG KNGGFRGGHLV+VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
XP_004139820.1 uncharacterized protein LOC101211410 [Cucumis sativus]2.9e-8291.12Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PV+NRQNITVQY SN RNS+SRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VEN NCFRFVAETDGI+E+FRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLP+LATA FDGGKLIVTVPKRED GEGAWG KNGGFRGGHLV VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
XP_008447155.1 PREDICTED: uncharacterized protein LOC103489672 [Cucumis melo]7.5e-8392.9Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PV NRQNITVQY SNGRNSLSRA+SLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VENSNCFRFVAETDG+SEEFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLPELATA FDGGKLIVTVPKRED GEGA G KNGGFRGGHLV+VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
XP_023006455.1 uncharacterized protein LOC111499177 [Cucurbita maxima]4.9e-7484.62Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PVSNRQN       NGRNSLSRAQS LGLNPKKLRRLPHVFSRVLELPFRSDADVS++ENS+CFRFVAET+GIS+EFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IG LESTL+ELEIDMWRFRLP+TTLPELATAAF  GKL+VTVPKRED GEG WG+KNGGF+GGHLV+VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
XP_038906706.1 uncharacterized protein LOC120092632 [Benincasa hispida]2.8e-8594.67Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+K+ PVSNRQNITVQY SNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VENSNCFRFVAETDGI+EEFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPK ED GEGAWGD NGGFRGGHLVVVQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
TrEMBL top hitse value%identityAlignment
A0A0A0K3G1 Uncharacterized protein1.4e-8291.12Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PV+NRQNITVQY SN RNS+SRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VEN NCFRFVAETDGI+E+FRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLP+LATA FDGGKLIVTVPKRED GEGAWG KNGGFRGGHLV VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
A0A1S3BGR7 uncharacterized protein LOC1034896723.6e-8392.9Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PV NRQNITVQY SNGRNSLSRA+SLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VENSNCFRFVAETDG+SEEFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLPELATA FDGGKLIVTVPKRED GEGA G KNGGFRGGHLV+VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
A0A5D3D0L4 Heat shock 22 kDa protein3.9e-8594.08Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PV NRQNITVQY SNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVS+VENSNCFRFVAETDG+SEEFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IGDLESTLDELEIDMWRFRLPETTLPELATA FDGGKLIVTVPKRED GEGAWG KNGGFRGGHLV+VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
A0A6J1H6F5 uncharacterized protein LOC1114604559.0e-7484.62Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PVSN+QN       NGRNSLSRAQS LGLNPKKLRRLPHVFSRVLELPFRSDADVS++ENSNCFRFVAET+GIS+EFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IG LESTL+ELEIDMWRFRLP+TTLPELATAAF  GKL+VTVPKRED GEG WG+KNGGF+GG LVVVQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
A0A6J1L064 uncharacterized protein LOC1114991772.4e-7484.62Show/hide
Query:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ
        M+KV PVSNRQN       NGRNSLSRAQS LGLNPKKLRRLPHVFSRVLELPFRSDADVS++ENS+CFRFVAET+GIS+EFRAHTVQIHPGVIKVVVRQ
Subjt:  MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQ

Query:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
        IG LESTL+ELEIDMWRFRLP+TTLPELATAAF  GKL+VTVPKRED GEG WG+KNGGF+GGHLV+VQ
Subjt:  IGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ
SwissProt top hitse value%identityAlignment
P12811 Heat shock 22 kDa protein, chloroplastic7.2e-0432Show/hide
Query:  ADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQIGDLESTLDELEIDMWR-----------FRLPETTLPELATAAFDGGKLIVTVPKRE
        A + ++E+   F   A+  G+  +     V++  GV+ V   +   L  T  E    +WR           F LPE   P+  TAA D G L+VTVPKRE
Subjt:  ADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQIGDLESTLDELEIDMWR-----------FRLPETTLPELATAAFDGGKLIVTVPKRE
Arabidopsis top hitse value%identityAlignment
AT3G22530.1 unknown protein2.3e-3758.57Show/hide
Query:  KKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISE---EFRAHTVQIHPGVIKVVVRQIG--DLESTLDELEIDMWRFRLPETTLPELATA
        K LRRLPH+F+RVLELP RS+ADV+V E  +CFRFVAET G+     E RA+ V+IHPG+ K+VVR  G   L  +LDELE+D+WRFRLPE+T PEL T 
Subjt:  KKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISE---EFRAHTVQIHPGVIKVVVRQIG--DLESTLDELEIDMWRFRLPETTLPELATA

Query:  AFDGGKLIVTVPK--REDDGEGAWGDKNGGFRGGHLVVVQ
        A   G LIVTVPK   E+D +G  GD   G   G LV+VQ
Subjt:  AFDGGKLIVTVPK--REDDGEGAWGDKNGGFRGGHLVVVQ
AT4G14830.1 unknown protein6.2e-3559.7Show/hide
Query:  NGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETD-GISEEFRAHTVQIHPGVIKVVVRQIG--DLESTLDELEIDMW
        N  N +  A+       KKLRRLPH+FSRVLELP +SDADV+V E+ +CFRFVAETD G     RA+ V+IHPGV K++VR  G   L  +LDELE+D+W
Subjt:  NGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETD-GISEEFRAHTVQIHPGVIKVVVRQIG--DLESTLDELEIDMW

Query:  RFRLPETTLPELATAAFDG-GKLIVTVPKREDDG
        RFRLPE+T PEL T   DG G+LIVTVPK ED+G
Subjt:  RFRLPETTLPELATAAFDG-GKLIVTVPKREDDG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGGTTCGTCCAGTATCCAACAGGCAGAATATCACTGTCCAATACACTTCAAATGGTCGCAACTCGCTCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAA
GAAACTACGGCGATTACCCCATGTTTTCAGCCGAGTTTTGGAGCTTCCATTTAGGTCCGATGCCGATGTTTCGGTTGTCGAAAACTCTAATTGCTTCCGATTCGTAGCGG
AAACTGATGGAATTAGCGAGGAATTTAGGGCGCATACGGTTCAAATCCATCCTGGGGTTATCAAAGTTGTGGTTAGACAAATTGGGGATCTGGAATCGACGTTAGATGAA
CTGGAGATCGACATGTGGAGATTTCGACTGCCGGAGACGACTCTCCCGGAGCTTGCAACCGCTGCGTTCGACGGCGGGAAACTCATCGTGACGGTTCCGAAGAGGGAGGA
CGACGGAGAAGGTGCGTGGGGGGATAAGAATGGGGGTTTTAGAGGAGGCCATTTAGTAGTTGTACAGTAA
mRNA sequenceShow/hide mRNA sequence
ACCGCAAGAAGAAAAAGAGATTACTTCAACAGCCTTTGTTAATTACTCTTCTCGCAAACATTCTCTGCGGAAAGAATTCTCCCTTTAACAATAAGTTCTTGTAGTTCTTC
AATTCTTTCATTTAATTTCCTTTATCTCACTTTGCAGAAATTGTTTCCGTTTCCGATTTCGATTTCGATTTTCCCCTTAAAAAACTAGAACGGAATCCGCTAACCCAGTG
ATCTCAATTCCTTAATGAATCTTCCTTTTCCTTCAATCTTCATTTATCTAATCAAGATTTTGATTCCGTTTGGGAATTGATGTTCCTTACTTCACCAGAGAATCACTGAT
TTCGCTATATATATCAGTTTCACCCCCTTTCTTTTTTCCATCCATTGACAAGAACGAAGGCAGAAGAAGAATCAATCGACGCCATGAGGAAGGTTCGTCCAGTATCCAAC
AGGCAGAATATCACTGTCCAATACACTTCAAATGGTCGCAACTCGCTCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTACGGCGATTACCCCATGTTTT
CAGCCGAGTTTTGGAGCTTCCATTTAGGTCCGATGCCGATGTTTCGGTTGTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAATTAGCGAGGAATTTA
GGGCGCATACGGTTCAAATCCATCCTGGGGTTATCAAAGTTGTGGTTAGACAAATTGGGGATCTGGAATCGACGTTAGATGAACTGGAGATCGACATGTGGAGATTTCGA
CTGCCGGAGACGACTCTCCCGGAGCTTGCAACCGCTGCGTTCGACGGCGGGAAACTCATCGTGACGGTTCCGAAGAGGGAGGACGACGGAGAAGGTGCGTGGGGGGATAA
GAATGGGGGTTTTAGAGGAGGCCATTTAGTAGTTGTACAGTAAATAGAATCTTTCTGTTGCGATTTTCCATTTATTGAGCAATTTAATGAAATTTGTGTTCACTCTTCTT
CTGGGTTGAATTGATTGTTCTGATTTTCTCCTTCTTGCTGAATCAAAATATAGCTTGAATTTACATAGAACATGATGCGGAAAGAACTTGGTACAACTTTCTTCAACTTT
TTTCTTAAAAAAATCATTTGACTGTGTTGGGTTCTGATTC
Protein sequenceShow/hide protein sequence
MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQIGDLESTLDE
LEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ