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Clc06G06570 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc06G06570
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein of unknown function (DUF1677)
Genome locationClcChr06:6879775..6880484
RNA-Seq ExpressionClc06G06570
SyntenyClc06G06570
Gene Ontology termsNA
InterPro domainsIPR012876 - Protein of unknown function DUF1677, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040802.1 hypothetical protein E6C27_scaffold333G00170 [Cucumis melo var. makuwa]1.6e-5485.51Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        MDEIE+VKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILF+SKNNHHS  PPP S+G IQDAVNAHMLFCRKFKSNPAVRVAD MKQILRR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

Query:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR
        RS+DLSSQSSSS       SNSTSSS   +MSSFSSLR
Subjt:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR

KAG6593885.1 hypothetical protein SDJN03_13361, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4377.21Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        M+EIE VKCECCGLKEECT+ YISEVKANFDAKWLCGLCSQAV DEI FRSKN       PPPS+G IQDA+ AHMLFCRKFKSNPAVRVAD MKQILRR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

Query:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSS
        RS+DLSS  SSS ++  S+S+S++SSQV DMSSFSS
Subjt:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSS

KAG7026232.1 hypothetical protein SDJN02_12731, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-4276.47Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        M+EIE VKCECCGLKEECT+ YIS+VKANFDAKWLCGLCSQAV DEI FRSKN       PPPS+G IQDA+ AHMLFCRKFKSNPAVRVAD MKQILRR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

Query:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSS
        RS+DLSS  SSS ++  S+S+S++SSQV DMSSFSS
Subjt:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSS

XP_004139880.3 uncharacterized protein LOC101209523 [Cucumis sativus]3.5e-5486.33Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSS-GAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILR
        MDEIE+VKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFR KNNHHSPP PPPSS G IQDAVNAHMLFCRKFKSNPAVRVAD MKQILR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSS-GAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILR

Query:  RRSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR
        RRS+DLSS  SSS+    S+SNSTSSS    MSSFSSLR
Subjt:  RRSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR

XP_038875601.1 pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida]4.7e-5990.34Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHS   PPPSSG IQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

Query:  RSTDLSSQSSSS------TNNNFSTSN-STSSSQVPDMSSFSSLR
        RSTDLSSQSSSS      T NNFSTSN ST SSQV DMSSFSSLR
Subjt:  RSTDLSSQSSSS------TNNNFSTSN-STSSSQVPDMSSFSSLR

TrEMBL top hitse value%identityAlignment
A0A068TRZ0 Uncharacterized protein1.3e-3362.41Show/hide
Query:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRS
        EIE+VKC+CCGLKE+CT+DYISEVKANFD KWLCGLCS+AV DE+    K +             + +AV AHM FCRK+KSNPA+RVAD M+Q+LRRRS
Subjt:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRS

Query:  TDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFS
         DLSS SSSS++  +S S+ST  SQV D SSFS
Subjt:  TDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFS

A0A0A0K5L1 Uncharacterized protein1.7e-5486.33Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSS-GAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILR
        MDEIE+VKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFR KNNHHSPP PPPSS G IQDAVNAHMLFCRKFKSNPAVRVAD MKQILR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSS-GAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILR

Query:  RRSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR
        RRS+DLSS  SSS+    S+SNSTSSS    MSSFSSLR
Subjt:  RRSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR

A0A5D3D0Q9 Uncharacterized protein7.6e-5585.51Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        MDEIE+VKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILF+SKNNHHS  PPP S+G IQDAVNAHMLFCRKFKSNPAVRVAD MKQILRR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

Query:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR
        RS+DLSSQSSSS       SNSTSSS   +MSSFSSLR
Subjt:  RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSLR

A0A6J1KCY5 uncharacterized protein LOC1114944771.5e-3975.78Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        M+EIE VKCECCGLKEECT+ YIS+VKANFDAKWLCGLCS+AV DEI FRSKN       PPPS+G IQDAV AHMLFCRKFKSNPAVRVAD MKQILRR
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

Query:  RSTDLSSQSSSSTNNNFSTSNSTSSSQV
        RS+DLSS  SSS +   S+S+S++SSQV
Subjt:  RSTDLSSQSSSSTNNNFSTSNSTSSSQV

A0A6P6X2S4 uncharacterized protein LOC1137347121.3e-3362.41Show/hide
Query:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRS
        EIE+VKC+CCGLKE+CT+DYISEVKANFD KWLCGLCS+AV DE+    K +             + +AV AHM FCRK+KSNPA+RVAD M+Q+LRRRS
Subjt:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRS

Query:  TDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFS
         DLSS SSSS++  +S S+ST  SQV D SSFS
Subjt:  TDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72510.1 Protein of unknown function (DUF1677)4.6e-1236.24Show/hide
Query:  DEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKS-----NPAVRVADAMKQ
        DE + V C+CCGL EECT+ YI  V+  +  KW+CGLCS+AV  E++ R+K                ++A+  HM  C KFKS     NP   +  AM+Q
Subjt:  DEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKS-----NPAVRVADAMKQ

Query:  ILRR--------RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSL
        ILR+        RS   S       +++   SN  S S     S F+SL
Subjt:  ILRR--------RSTDLSSQSSSSTNNNFSTSNSTSSSQVPDMSSFSSL

AT1G79770.1 Protein of unknown function (DUF1677)1.4e-1641.84Show/hide
Query:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR
        E+E  KCECCG++EECT +YI  V+  F  KW+CGLCS+AV +E   R K             GA+++ ++A + F +  +  PA+  ADAM+ +LRR
Subjt:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRR

AT3G22540.1 Protein of unknown function (DUF1677)2.7e-2854.92Show/hide
Query:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKF-KSNPAVRVADAMKQILRRR
        EIE V+CECCGL E+CT+DYISEVK+NFD KWLCGLCS+AV DE+  R                 + +AV AH+ FC KF K NPAV VAD M+Q+LRRR
Subjt:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKF-KSNPAVRVADAMKQILRRR

Query:  STDLSSQSSSSTNNNFSTSNST
        S +L   ++SST+  F  SN+T
Subjt:  STDLSSQSSSSTNNNFSTSNST

AT4G14819.1 Protein of unknown function (DUF1677)1.1e-2653.72Show/hide
Query:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRS
        EIE V CECCGL E+CT+ YIS+VKANF  KWLCGLCS+AV DE                 SS  +++AVNAHM FC KF +NPA  VAD M+Q+LRRRS
Subjt:  EIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRS

Query:  TDLSSQSSSSTNNNFSTSNST
         +LS + S      F  SN+T
Subjt:  TDLSSQSSSSTNNNFSTSNST

AT5G25840.1 Protein of unknown function (DUF1677)3.8e-1437.74Show/hide
Query:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKF----KSNPAVRVADAMKQ
        + E+E  KCECCG+ EECT +YI  V++ F  K +CGLC +AV  E+     NN              ++AV  HM  C +F    +S P +  A+A+K+
Subjt:  MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKF----KSNPAVRVADAMKQ

Query:  ILRRRS
        +L++RS
Subjt:  ILRRRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTACATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGGCTTTGTGG
CCTTTGTTCACAAGCCGTTGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGCCGCCGCCGCCGTCGTCTGGAGCAATTCAAGACGCCGTTAACG
CTCACATGCTTTTCTGCCGCAAGTTCAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTCAATCCTCT
TCTTCTACTAACAATAATTTCTCCACTTCTAATTCTACTTCTTCTTCCCAGGTTCCCGACATGTCTTCTTTCTCTTCCCTTCGATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAACTCTTCTTCTCCTCTTCTACATCTTTTTCTCCATTTTTTTTGAAAGCTTTCTCCTTTTCTATATATTAGAGGAAGAAAAAGAAAAAGAAAAAGAAAA
ATTTGGTAATGGATGAAATAGAAGTAGTGAAGTGTGAGTGTTGTGGGTTAAAAGAAGAATGCACAAAAGATTACATTAGTGAAGTGAAGGCTAATTTCGACGCTAAATGG
CTTTGTGGCCTTTGTTCACAAGCCGTTGGTGACGAAATTTTGTTCAGATCCAAAAACAACCACCACTCGCCGCCGCCGCCGCCGCCGTCGTCTGGAGCAATTCAAGACGC
CGTTAACGCTCACATGCTTTTCTGCCGCAAGTTCAAATCTAACCCTGCCGTTAGAGTCGCTGACGCCATGAAGCAAATCTTGAGAAGGCGCTCAACCGACTTGTCGTCTC
AATCCTCTTCTTCTACTAACAATAATTTCTCCACTTCTAATTCTACTTCTTCTTCCCAGGTTCCCGACATGTCTTCTTTCTCTTCCCTTCGATAATTTCCAAACTTATTT
ATAATAATAATTCTATTTTTCTCTCTTTTTAATAATAATAACTATATCCTTCCTCTCTCTTTTCTCTCTAGTCTTTTTCTTCATAATTTTGCCTCTAATTTTGATCACAG
CTATGTAAAACAATTTATTTTTTATTTTTTATTTTATTTTTATTTTACGG
Protein sequenceShow/hide protein sequence
MDEIEVVKCECCGLKEECTKDYISEVKANFDAKWLCGLCSQAVGDEILFRSKNNHHSPPPPPPSSGAIQDAVNAHMLFCRKFKSNPAVRVADAMKQILRRRSTDLSSQSS
SSTNNNFSTSNSTSSSQVPDMSSFSSLR